AN ABSTRACT OF THE THESIS OF DAN V. MOURICH FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN MICROBIOLOGY PRESENTED ON MARCH 20. 1996. T1TLE: ANALYSIS OF IMMUNE MODULATORS IN RAINBOW TROUT (Oncorkvnchus mykiss Redacted for Privacy Abstract approved: The immune systems of various teleost fish have been studied in some detail for the past several decades. One aspect of fish immunity, that of endogenously produced modulating factors, has recently received a great deal of attention. Understanding the functions and roles of endogenous factors that regulate fish immunity is paramount to expanding the fields of fish immunology and vaccinology. It is know that several lymphoid cell derived factors are detectable in in vitro cell culture systems and exhibit immune modulating effects similar to well studied proteins in mammals. However in comparison, few genes or gene products involved in the modulation of the trout immune responses have been isolated, cloned and characterized. The studies described herein were designed to isolate specific genes from rainbow trout (0 ncorhynchus mykiss ) and characterize their involvement in the modulation and regulation of the trout immune system. Two distinct genes were isolated cloned and sequenced. The first, non-specific cytotoxic cell enhancement factor (NCEF) gene is closely related to a human gene termed "natural killer enhancement factor" (NKEF) which is important in the modulation of human natural killer cell activity. The second gene is closely related to a group of recently characterized mammalian genes involved in the signal transduction of cytokines termed "STATs". The role of these genes and their respective protein products will be examined and discussed. The antigenic structures of the fish proteins (NCEF and STAT5) were examined by western blot and immunohistochemistry. Monoclonal antibodies derived against the respective human proteins were found to cross react with the corresponding trout proteins, demonstrating antigenic relatedness. The monoclonal regents were also used to analyze the expression of these proteins in fish cells of lymphoid and non lymphoid origin. In vitro cell culture analysis was used to determine the effects and roles of NCEF and STAT5 gene products in the trout immune system. The cytolytic and apoptotic killing activities of spleen, head kidney and peripheral blood leukocytes were found to be enhanced by NCEF. Mitogenic stimulation of peripheral blood lymphoid cells resulted in the trout STAT 5 protein binding to a know sequences contained with in the promoters of genes transcriptionally activated in response to cytokine exposure. ANALYSIS OF IMMUNE MODULATORS IN RAINBOW TROUT (Oncorhynchus mykiss ) by Dan V. Mourich A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy Completed March 20, 1996 Commencement June 1996 © Copyright by Dan V. Mourich March 20, 1996 All Rights Reserved Doctor of Philosophy thesis of Dan V. Mourich presented on March 20, 1996 APPROVED: Redacted for Privacy or Professor, representing crobiology Redacted for Privacy air of Department of Microbiol Redacted for Privacy Dean of Gradate School I understand that my thesis will become part of the permanent collection of Oregon State University libraries. My signature below authorizes release of my thesis to any reader upon request. Redacted for Privacy Dan V. Mourich, Author ACKNOWLEDGMENTS The one person most instrumental in making this thesis possible was Dr. Jo-Ann Leong. Without her constant support, guidance and confidence in my abilities and this work these studies would have not been possible. I thank her specifically for allowing me the opportunity to work for her as both a technician and a graduate student over the past years. It has been a privilege and honor to learn from her in both capacities. I also thank my various lab mates, colleagues, fellow students, friends and teachers; Jon Piganelli for his friendship and unending interest in immunology, Marc Johnson for his steadfast work ethic, Grant Trobridge for his expertise and jokes across the bench, Eric Anderson for the 6 am mountain bike rides and late night guitar sessions, Jon Hansen for his friendship and brewing excellence, Peter Chiou for his friendship and cooking skills, Dr. Linda Boot land and Harriet Lorz for their constant help, Dr. Carol Kim for her expertise and friendship, Don Stevens for his help and eye for detail, all of the Oregon Department of Fish and Wildlife people for their help and morning coffee, Jon Pampush for fishing, hunting, rafting, basketball and all the things that got me out of the lab and kept me sane, and Dr. Steven Kaattari for making immunology the first science I thought was cool. CONTRIBUTION OF AUTHORS Dr. Jo-Ann Leong was involved in all aspects of the work reported within this thesis including experimental design, data analysis, interpretation, writing criticism and financial support. Dr. Jon Hansen was involved in supplying both the library and molecular screening expertise for the isolation of the NCEF clone described in Chapter 3. Marc Johnson was involved in all aspects of cloning, sequencing and biological characterization of the STATS gene described in Chapter 5. Dr. Carol Kim provided expertise and work crucial to the immunohistochemical confocal microscopic analysis of the STATS protein in chapter 5. TABLE OF CONTENTS Chapter Page 1. THESIS INTRODUCTION 2 Objectives Approach Isolation of Genes Assessment of Biological Activity Introduction to Thesis Chapters 2. 1 LITERATURE REVIEW Perspective Nomenclature History Defining Fish Cytokines Molecular Evidence of Cytokines in Fishes Cytokine Signal Transduction 3. NATURAL KILLER CELL ENHANCEMENT FACTOR-LIKE GENE IN RAINBOW TROUT (Oncorhynchus mykiss) Introduction Acknowledgments References 3 3 4 5 7 7 7 9 20 28 31 32 36 36 4. CHARClERIZATION OF A NON-SPECIFIC CYTOTOXIC CELL ENHANCEMENT GENE PRODUCT (NCEF) IN RAINBOW TROUT (Oncorhynchus mykiss ) Abstract Introduction Methods and Materials Results and Discussion Acknowledgments References 38 39 40 41 51 65 65 5. CLONING AND SEQUENCE OF A STAT 5-LIKE GENE IN RAINBOW TROUT (Oncorhynchus mykiss ): DISTRIBUTION IN LYMPHOID CELLS Abstract Introduction Materials and Methods Results and Discussion Acknowledgments 68 69 69 72 78 98 TABLE OF CONTENTS (Continued) Chapter References Pu 98 6. Thesis Summary Immune Modulatory Genes in Rainbow Trout Biological Characterization of Gene Products 101 101 101 BIBLIOGRAPHY 103 LIST OF FIGURES Figure Page 3.1 Complete nucleotide sequence of trout NKEF related clone. 34 Autoradiogram of 35S-methionine labeled in vitro transcription product derived from NCEF gene insert.. 53 4.2 Western blots with anti -NKEF monoclonal antibodies 55 4.3 Immunohistochemical analysis of CHSE-214 cells transfected with CMV-NCEF or CMV-Pgal . 55 4.4 Results of chromium release assay with head kidney leukocyte effectors. 58 4.5 Results of chromium release assay with spleen leukocyte effectors 58 4.6 Results of chromium release assay with peripheral blood leukocyte effectors 60 Results of DNA fragmentation assay for peripheral blood leukocyte effectors 63 Results of DNA fragmentation assay for headkidney leukocyte effectors. 63 4.1 4.7 4.8 5.1a Sequence of STAT 5-like gene segment (nucleotides 1 to 420) from rainbow trout (0. mykiss). 79 5.1b Sequence of STAT 5-like gene segment (nucleotides 421 to 840) from rainbow trout (0. mykiss). 81 5.1c Sequence of STAT 5-like gene segment (nucleotides 900 to 960) from rainbow trout (0. mykiss). 83 5.2 Predicted amino acid sequence of trout (0. mykiss) STAT 5-like protein and its relationship related to other STAT5 proteins from human, sheep and mouse 85 5.3 Detection of STAT 5 proteins fish cell lines 88 5.4 Distribution of STAT 5 protein in trout tissues. 90 5.5 Confocal immunohistochemical analysis of trout cells with STAT 5 specific monoclonal antibody. 93 Electromobility shift and super shift assay with PBL nuclear extracts harvested 1 hour after exposure to Con A. 96 5.6 LIST OF TABLES Table Page 2.1 The pleiotropic and redundant activities cytokines 5.1 PCR primers pairs and gene segments along the human STAT 5 gene 11 74 DEDICATION I dedicate this thesis to my family, who supported me with their love and faith over the many years. ANALYSIS OF IMMUNE MODULATORS IN RAINBOW TROUT (Oncorhynchus mykiss ) CHAPTER 1 THESIS INTRODUCTION In the past decade much has been learned about the various proteins which control and regulate the mammalian immune system. These proteins are functional components in various immune mechanisms such as cell to cell communication, antigen recognition or signal transduction. Since all of these mechanisms result in the modulation of cells of the immune system, the proteins involved can be described in broad terms as "immune modulators". The genes of many of these immune modulators have been isolated, cloned and characterized. Examples of these are cytokines, cytokine receptors, T cell receptors and transcription factors. This had led to a detailed understanding of the mammalian immune system and made possible the manipulation of immune responses for the benefit of combating disease. There is biological evidence for the existence of immune modulators in fish. However, little is known about the specific proteins involved in fish immune responses or the genes which code them. Many fish cell culture derived factors with immune modulatory activities similar to various mammalian cytokines have been described (Secombes, 1994). Yet, few genes coding for these factors have been cloned and characterized in fish. There are many possible reasons why isolation of such genes from fish has been elusive. Some of the difficulty likely resides in the techniques used and the assumptions that must be made when using these techniques. For example, most researchers including this laboratory have attempted to isolate cytokine gene sequences by employing the polymerase chain reaction (PCR). The initial assumption that designing 2 PCR primers to homologous regions found by comparisons of published cytokine gene sequences may be erroneous. By and large cytokine gene sequences available for homology comparisons are mammalian. Very little cytokine sequence data is available for species bridging the phylogenetic gap between mammals and fish. It is likely that insufficient homology between fish and mammalian genes, particularly in these primer regions, could account for negative results. A more successful approach in isolating the genes involved in the fish immune response might be the use of PCR to amplify genes whose sequences were conserved throughout a phylogenically diverse range of species. Other proteins involved in immune modulation besides cytokines might be better candidates for gene isolation from fish by PCR. Genes that code for proteins that are dependent on structural features intrinsic to their function, such as DNA binding motifs, nuclear translocation signals or protein modification sites, may be more conserved throughout evolution. Using these two strategies for designing PCR primers, i.e. 1) conserved gene sequence information from various taxa and 2) conserved sequences based on the required structure for the functional features of proteins, may be more suitable for isolating genes of immune modulators from fish. Isolation and characterization of genes and their respective proteins involved in fish immune modulation ,specifically rainbow trout, would not only help in understanding the salmonid immune system more fully but would also be valuable in designing drug or vaccine strategies to combat fish disease. Objectives The objectives of these studies were to 1) isolate genes which code for proteins involved in the modulation of rainbow trout immune responses 2) compare the relative homologies of these trout genes to know gene sequences from other species 3) analyze the 3 functions of the protein products from these genes in trout immune modulation and 4) compare the functions of these trout proteins to their mammalian counterparts. Approach To study the immune modulating molecules of rainbow trout (Oncorhynchus mykiss ), complementary DNA clones (cDNAs) of the genes of interest had to be isolated, cloned and sequenced. Once sequence information was obtained then sequence homology comparisons of the specific trout gene to the known gene sequences could be made by computer analysis. If sufficient homology existed between an isolated fish gene and known gene sequences then antibodies to the known protein might be used to determine structural relatedness. Monoclonal antibodies to known mammalian immune modulating proteins were obtained to determine if the trout proteins were structurally similar to the mammalian proteins. In vitro studies were then designed and carried out to examine the biological activities of these trout proteins and determine if there were functional similarities to the mammalian proteins. Two genes were isolated from rainbow trout and examined in these studies. The first is a nonspecific cytotoxic cell enhancement factor (NCEF) which is related to a human natural killer cell enhancement factor (NKEF). The second is related to group of proteins involved the signal transduction of cytokines termed signal transduction and activator of transcription (STAT). Specifically the STAT5 gene for rainbow trout was isolated which is related to the group of STAT proteins involved in interleuldn-2 (IL-2) signal transduction. Isolation of Genes PCR amplification technique was used to isolate immune modulator genes from trout. Synthetic primers were designed to well conserved regions of a known gene 4 sequence found in humans termed natural killer enhancement factor gene (NKEF) that shares homology with related genes found in a phylogenetically diverse range of organisms. Primers were also designed to well conserved regions found in the STAT5 gene which encodes a protein highly conserved among mammalian species and sequences based upon functional structures in the protein. In both cloning attempts, primers were designed to regions coding for amino acids with low codon degeneracy. The template source for the PCR reactions was a cDNA pool was made from messenger RNA (mRNA) derived from peripheral blood lymphocytes (PBLs). Products derived from the PCR reactions were isolated, cloned and sequenced. Then, computer aided analysis was used to determine their relative similarity with known gene sequences. After confirming that a trout derived gene sequence was significantly related to its mammalian counterpart, the cloned gene segment in the case of the trout-NKEF was used as a probe to screen a rainbow trout cDNA library. In the case of the STAT5 gene, sequence information obtained form the initial PCR amplification was used to synthesize new primers for subsequent screening of the cDNA pool for larger portions of the gene. Assessment of Biological Activity In the case of the nonspecific cytotoxic cell enhancing factor gene (NCEF) or trout- NKEF, a recombinant form of the protein was produced in a salmonid cell line, CHSE­ 214, by transfection of a eukaryotic expression plasmid containing the NCEF cDNA insert. The transfected cell lines expressing the factor served as a target cell source to assess the effect of NCEF protein on trout leukocytes activity placed in the transfected cultures. The enhancement effect of NCEF was examined by measuring the increased cytotoxicity (necrosis and apoptosis) of target cells expressing the NCEF upon exposure to trout spleen, head kidney, and peripheral blood derived leukocytes. Target cells transfected with DNA for the expression of 13-galactosidase (n-gal) served as controls. 5 The binding of the trout STAT5 protein to DNA was examined in electromobility shift and super-shift assays (EMSA). Lymphocytes were exposed to mitogen stimulus in culture for 1 hour and then the nuclear proteins were extracted. The presence of STAT5 like proteins was assessed by their ability to bind to a specific double-stranded 32P labeled synthetic primer. The primer sequence was derived from sequence elements found in the promoters of genes, whose expression is regulated by cytokines through the binding of STAT5 proteins. Binding reaction mixtures were fractionated on non-denaturing polyacrylamide gels and protein-primer binding was detected by autoradiography. To determine if the positive binding reaction was due to a specific STAT5 protein-primer interaction, the mixture was pre-incubated with an anti-STAT5 monoclonal antibody. STAT5 binding was confirmed by a super shift in the banding pattern for the monoclonal antibody treated material as compared to the untreated material. Introduction to Thesis Chapters Chapter 3 is a published gene sequence report of the complete coding sequence of a trout derived gene, and its similarity to two human genes coding for natural killer enhancement factors (NKEF A and B). Initially, primers were designed to conserved regions found in the two human genes. These primers were used in a PCR reaction to amplify a segment of the gene from a trout blood cell cDNA pool. This PCR product was cloned, sequenced and confirmed to be related to the NKEF genes. The cloned product was then used to screen a rainbow trout cDNA library from which a full length trout cDNA was obtained. This is the first report of a trout gene with significant homology to a known human gene involved in the enhancement of an immunological response. Chapter 4 is a manuscript reporting the biological and antigenic relatedness of the trout NKEF -like protein termed, nonspecific cytotoxic cell enhancement factor (NCEF), to the two human NKEF proteins. The trout protein was found to be similar in molecular 6 weight to NKEF proteins and shared epitopes with NKEF A or B. This was demonstrated in western blots with monoclonal antibodies which differentiate between the two human NKEF proteins. The trout NCEF protein was also found to enhance the necrotic killing activity of trout leukocytes similar to the effects of NKEF A and B on human natural killer cells. Also, apoptosis which has not yet been demonstrated for the human NKEF proteins was enhanced by the trout NCEF protein . Chapter 5 is a manuscript reporting the existence of a trout gene whose encoded protein, is structurally and functionally related to the mammalian gene STAT5, a protein known to be involved in the transduction of cytokine signals. Signal transduction and activator of transcription (STAT) proteins are necessary components in the signaling process of many cytokines. These proteins, in response to the binding of specific cytokines to their cognate receptors are phosphorylated and translocated to the nucleus. Once in the nucleus they bind to target sequences found in the promoter elements of cytokine regulated genes and activate transcription of these genes. The finding of these proteins in salmonid cells will be valuable in defining trout cytokines and aid in the isolation of these genes. 7 CHAPTER 2 LITERATURE REVEIW Perspective The predominant portion of the literature describing the activities, gene sequence and signal transduction mechanisms of cytokines has been based primarily on studies in mammals. Over the years, the results of these studies have formed the basis of a number of different definitions and attempts to categorize cytokines. The study of cytokines in more primitive animals, namely fish, is at the stage where mammalian cytoldnes were three decades ago. There are many studies describing fish cell derived "factors" exhibiting activities that parallel mammalian cytokines; but there have been far fewer studies dealing with cloned genes homologous to mammalian cytokines. The purpose of this chapter is not to describe in detail the vast amount of information available on each cytokine, but to summarize the information available on cytokines in fish. The information on cytokine -like factors found in fish will be examined for functional and molecular similarities with their mammalian counterparts. Nomenclature History Mediators of cellular immunity defined as non-antibody, lymphocyte-derived, proteins were first termed "lymphokines" by Dumonde et al. (1969). The term "cytokine ", defined as "soluble proteins that mediate communication between cells", was next proposed by Cohen et al. (1974) to distinguish mediators that were only produced by lymphocytes. The defmition of "interleukin" was coined soon after to recognize cytokines that function exclusively as communication signals between leukocytes (Aarden, 1979). However, these terms are inadequate because many interleuldns were found to be produced by and 8 have an effect on a variety of cell types. Throughout the past three decades cytokines have undergone several changes in classification as additional information has been gained about their particular function, source, structure and molecular basis for activity. Ever since the presence of these factors was first hypothesized by Bloom and Bennett in 1966, the field of immunology has grown. The isolation, characterization and use of cytokines have not only aided in understanding the intricacies of the immune system, but have also made possible the manipulation of immune responses for therapeutic benefit. The first two decades of cytokine research dealt with classifying the biological activities of "factors" found in preparations of crude or partially purified culture conditioned media supernatant (CMS) fluids. Derived from lymphoid cells induced with various mitogens or antigens, these CMS factors were added to cultures of "indicator cells" and the ensuing cytological phenomena would be observed and measured. For example, preparations able to activate macrophages were said to contain macrophage activation factor or MAF (Nathen et al., 1983). The number of acronyms grew as new factors were found to exhibit chemoattraction, inhibition, maturation, growth, transformation, differentiation, necrotizing and stimulation activities on various cell types (as reviewed by Paul, 1989; Vilcek and Lee, 1994). Factors were then characterized by source cell type; for example, if the source was a cell from monocyte/macrophage lineage, the factor was categorized as a "monokine". A wide range of activities were observed from different cell types under different induction conditions and it was hypothesized that a single substance could be assigned to each identified activity (as reviewed by Kishimoto et al., 1994). It was not until the third decade of cytokine research and the advent of recombinant DNA technology that substantial progress was made in characterizing the properties of an individual cytokines. Recombinant DNA technology enabled scientists to produce large quantities of individual cytokines free from contaminating cellular proteins. A purified cytokine separated from the mixture of substances found in a given CMS made it possible to test the hypothesis that a single immunological function could be assigned to each 9 cytokine. These studies showed that purified cytokines often exhibited multiple functions and overlapping activities. The ability of a cytokine to exert more than one action on multiple cell types has been termed " cytokine pleiotropy". The term "cytokine redundancy" describes shared activities by different cytokines (Paul et al., 1989). Even though each cytokine is different by gene sequence and protein product, their roles in immune responses are more complicated than previously thought. Therefore categorizing cytokines based on a single activity is not possible. Recombinant technology has also made possible the cloning and sequencing of the cognate receptors for the various cytokines. This lead to another scheme for categorizing cytokines, based upon conserved receptor structures. For example the receptors for interleukins 2-6,7,9 and 12, granulocyte macrophage stimulatory factor (GMCSF), prolactin and growth hormone all share a common structure and have been placed in a group known as the "hematopoietins" (Paul et al., 1994). The elucidation of shared receptor structures helped in understanding the pleiotropic and redundant nature of different cytokines. If receptor structures for different cytokines are similar, then the secondary messenger molecules that interact with the receptors may also be similar. In fact, recent information regarding signal transduction has led to a new categorization scheme for cytokines based upon the families of secondary messengers used in the transduction of signals (Lin et al., 1995) Defining Fish Cytokines There are several technical obstacles that make it difficult to classify as specific cytokines the different biologically active factors found in primitive animals. The first is that cytokines are pleiotropic and redundant. This makes it difficult to assign a factor exhibiting a single activity to one specific cytokine without the complete characterization of that factor. For example, the activation of macrophages can be induced by interferon 10 gamma; however, other cytokines can activate macrophages as well, such as granulocytemacrophage colony stimulation factor (GMCSF) (Gasson et al., 1991) and interleukin-3 (IL-3) (Schrader et al., 1988). Neutrophil activation is another example of redundant cytokine activities; induced by interleuldn-1 (IL-1) this activity is also shared by interleukin-8 (IL-8) (Luger et al., 1983). The pleiotropic nature of cytokines can be seen in the example of interleukin-2 (IL-2) activity. IL-2 can effect various cell types in different ways such as the growth of T cells (Paul and Ohara, 1987) or the activation of NK cells (Trinchieri et al., 1984). The pleiotropic and redundant nature of the specific cytokines interferon, IL-1 and IL-2 can be seen in Table 2.1 which shows examples of alternate cytokines exhibiting these activities. It becomes evident from these examples that assigning a factor found in a CMS to a specific cytokine is difficult unless all of the possible activities of that factor are determined. The cytokines interferon, IL-1 and IL-2 were chosen for this comparison because the majority of non-mammalian literature describing cytokine-like factors assign activity to these particular cytokines. The experiments in fish systems which describe the presence of these cytokine activities will be discussed in the following sections. Determining other possible activities is the second obstacle to defining fish derived factors as specific cytokines. This is mainly due to the lack of assay systems to study the fish immune response. In most cases the highly specific and sensitive assay systems used for the detection of mammalian cytokines are not available for fish. For example, cytokine­ dependent cell culture lines that require specific cytokines to sustain growth do not exist for analysis of fish cytokine -like factors. The first such cell line to be described is the murine CTLL line which requires IL-2 or IL -4 for growth (Gillis, 1978). This cell line is sensitive to cytokine concentrations between 50 pg/mL - 50 ng/ mL of cytokine (Gearing and Thorpe, 1988). Although long term cultures of fish lymphocytes are possible, the 11 NAME ACTIVITY ALTERNATE REFERENCE Interferons antiviral activity Lymphotoxin Hamblin et al., 1993 Weissenbach et al, 1980 Mestan et al., 1986 Interleukin-6 TNF macrophage activation Interleukin-3 Interleukin-4 Interleukin-8 GMCSF Lymphotoxin Interleukin-1 (endogenous pyrogen) fever induction, shock neutrophil activation acute phase reaction Interleukin-2 (T Cell Growth Factor) Schrader et al., 1988 Paul et al., 1991 Luger et al., 1983 Gasson et al., 1991 Vilcek et al., 1991 GMCSF Okusawa et al., 1988 Vilcek et al., 1991 Gasson et al., 1991 Interleukin-8 Interleukin-3 Interleukin-6 Luger et al., 1983 Schrader et al., 1988 Sehgal et al, 1995 Lymphotoxin Dinarello et al, 1991 TNF Lymphotoxin induces growth and Interleukin-3 proliferation of T Interleukin-4 Cells Interleukin-7 Interleukin-9 Interleukin-12 Interleukin-15 Londei et al., 1989 Paul & Ohara,1987 Noguchi et al., 1993 Moeller et al., 1990 Zeh et al., 1994 Thomson et al., 1994 increased NK TNF activity Interferon a Ostensen et al., 1987 Lucero et al., 1981 Perussia et al., 1980 Weigent et al., 1982 Trinchieri et al., 1984 Nagler et al., 1988 Edington et al., 1994 Naume et al., 1992 Shau & Golub, 1993 Interferon 13 Interferon y Interleukin-2 Interleukin-4 Interleukin-7 Interleukin-12 NKEF Table 2.1 The pleiotropic and redundant activities of cytokines. 12 characterization of the particular cell type and specific cytokine response characteristics of this cell type have yet to be determined (Lin et al., 1992). A third obstacle to fish cytokine study is that some immune phenomena dependent on specific cytokines are not present in fish, such as antibody class switching. Interleukin­ 4 or interleuldn-13 must be available to differentiating B-cells in vivo in order to switch to class E (IgE) or IgG4 immunoglobulin synthesis (Pene et al., 1988; Punnonen et at, 1993). The last obstacle to studying fish cytokines is the paucity of cloned cytokine fish genes available for characterization or comparison. Cytokine sequence information from one fish species would be valuable in isolating these genes from another species. Cloned cytokine genes from fish would also help in the characterization of these cytokines. Purified cytokine proteins could be made by recombinant techniques and used in assay systems to determine which cell types are affected and the different activities induced. Attempts to purify these factors from fish by conventional methods such as chromatography have been done but this has often resulted in different molecular weight fractions containing the same activities. Because of these various obstacles, literature citations for fish and lower animals generally refer to cytokine activities with the qualification hyphenated "like" to suggest that the factor(s) being described exhibits some but not all the qualities of a particular cytokine. Interferons The hallmark experiment by Isaacs and Lindemann in 1957 first described interferon (INF) as a "non-hemagglutinating, heat stable, macromolecule that was released from chick embryos following incubation with inactivated influenza virus and that interfered with the growth of live virus ". Interferons have since been found to be produced by several cell types from a variety of species (as reviewed by Secombes, 1994). 13 Three classes are described in mammals, INF-a, INF-0 and INF-y, and these in turn are classified into different group types on the basis of their biological and biochemical properties (Stewart, 1980). Type I interferons include INF-a and INF-ii Both are stable to pH 2.0 and are produced by many cell types including fibroblastic, epithelial and leukocytic cells. Though very similar biologically, they share only 30 % amino acid homology, 45 % nucleotide homology and are thought to have diverged from a common ancestral gene hundreds of millions of years ago (Taniguchi et al., 1980). There is abundant literature demonstrating evidence of type I interferon-like factors in various species of fish including salmonids, carp, flat fish, fathead minnow and goldfish (as reviewed by Secombes, 1994). The majority of these reports deal with in vitro studies measuring the production of interferon-like activity from fibroblastic and epithelial cell lines in response to viral infection (Gravel and Marlsberg, 1965; De Sena and Rio, 1975). Interferon activity was also demonstrated to be elicited in vivo in response to pathogenic viruses VHS or Egtved (Dorson et al., 1975; de Kinkelin et al., 1982). In these studies, serum samples were assayed for the capacity to induce non-specific protection to virus challenge. This was done by means of tissue culture assay or passive transfer to live animals after removal of virus specific antibodies. The interferon-like activity was shown to be non-specific since it induced protection against an unrelated pathogenic virus, infectious pancreatic necrosis virus (IPNV). Biochemical evidence showed that these serum or culture-derived factors responsible for the induction of virus protection were similar to type I interferons. Interferon-like factors from both sources, in vivo and in vitro, are acid- and heat-stable. Surprisingly, they differ widely in molecular weights, 26 k Da and 94 k Da, respectively (Dorson et al., 1975; De Sena and Rio, 1975). There is little molecular evidence that fish interferons are related to mammalian type I interferons (reviewed under the section Molecular Evidence of Cytokines in Fish in this chapter). However, the cell type source, induction method and chemical stability suggest they are similar. 14 Type II interferon, INF-y, appears unrelated to both type I interferons since the proteins not only share less than 10 % amino acid homology , but are also biochemically and functionally distinct (Epstein, 1984). Wheelock reported in 1965 a substance that inhibited virus growth similar to previously described interferons, yet it was not acid or heat stable. Also this substance was alternatively produced by leukocytes induced with a lectin, phytohemagglutinin, and not by the classical viral induction methods. Later it was determined that T cells were the primary cell source for the newly designated interferon, INF-y and it was thus categorized as a lymphokine (Kiener and Spitalny, 1987). Additional to the biochemical, inducing agent and cell source differences, INF-y is a multifunctional cytokine mediating a wide range of activities besides inhibition of virus growth. These include activation and differentiation of hematopoietic cells and regulation of expression of other cytokines and cytokine receptors (Hamblin, 1994). A well characterized example of cell activation induced by INF-y is macrophage activation. Macrophage activating factor (MAF) was the designation given to culture supernatants containing an activity that enhanced the oxygen-dependent and independent antimicrobial and anti-tumor mechanisms of macrophages (Cohn, 1978; North, 1978). Although many cytokines exhibit MAF activity, it was first shown in the human and murine systems that a lymphokine biochemically identical to INF-y could specifically increase the oxidative metabolism and respiratory burst of macrophages measured by the reduction of ferricytochrome C (Nathen et al., 1983; Fukazawa et al., 1984 ). Activation of rainbow trout (Oncorhynchus mykiss) macrophages in culture has been measured by both increased respiratory burst and bacterial killing. Two by-products of macrophage respiratory burst have been measured by an alternative method using the colorimetric indicators nitroblue tetrazolium (NBT) to indicate superoxide anion and phenol red (dependent upon the oxidation of horseradish peroxidase) to indicate hydrogen peroxide production. In the first such study phorbol myristate acetate (PMA) and concanavalin A (Con A), known inducing agents of INF-y in mammals (Yip et al., 1981), 15 were added to cultures of rainbow trout head kidney and blood leukocytes in vitro (Graham and Secombes, 1988). After three hours the media were removed and the cultures were washed several times to remove residual inducing agent. New medium was placed on the cultures and allowed to incubate for an additional 48-72 hours. The CMS supernatants were then used to treat a partially purified culture of head kidney macrophages. It was found that the levels of reactive oxygen species and bacterial killing were increased significantly. This was one of the first studies to suggest that a lymphocyte-derived factor or a lymphokine existed in fish for which a specific immune response mechanism could be measured, namely macrophage bactericidal activity. In a follow up study, panning experiments were performed on the leukocytes with a monoclonal antibody specific for teleost immunoglobulin (Deluca et al., 1983) and it was found that leukocytes negative for surface immunoglobulin were responsible for the production of macrophage activating factor (Graham and Secombes, 1990). This study not only determined the type of cell which produced MAF, but also provided further evidence that trout lymphocyte populations, like mammalian lymphocytes, can be separated into T and B-like cells based on immunoglobulin and cytokine expression . Of course to confirm the T cell hypothesis, the trout derived MAF would have to fit some of the defining characteristics of INF-y. The necessary chemical and biological experiments were performed in a third study that supported this hypothesis (Graham and Secombes, 1990). First, CMS fluids containing the factor were shown to confer viral resistance on a trout epithelial cell line, a finding that characterized the factor as an interferon. Second, both the MAF and interferon activities co-eluted from HPLC size exclusion chromatography which demonstrated that a single factor with an apparent molecular weight of 19 k Da was responsible for both activities. Lastly, the factor displayed sensitivities to acid and temperature resembling those of mammalian INF -'y. 16 Interleuldn-1 Interleukin-1 (IL-1) is one of the most widely described interleukins. It is produced by a variety of cell types, but mainly those from the monocyte and macrophage lineage (Di-Giovine and Duff, 1990). It is also the most pleiotropic of the cytokines including the interferons. The range of biological activities includes fever, shock, acute phase response and cytokine synthesis induction, activation of neutrophils and endothelial cells as well as induction of mitogenic responses in T, B and fibroblastic cells (Hamblin, 1993). With such a variety of sources and actions, it is not surprising that IL-1 like factors have been described for a number of species from across the phylogenetic spectrum. Factors exhibiting lL-1 activity have been found in echinoderms, tunicates, annelids, gastropods, amphibians, birds and teleost (Beck et al., 1989; Beck and Habicht, 1986; Paemen et al., 1992; Granath et al., 1994; Watkins et al., 1987; Hayari et al., 1982 and Verburg-van Kemenade et al., 1995). The earliest evidence for the necessity of an IL-1 like factor in fish came from studies of channel catfish. Paralleling the murine experiments that determined the requirement for accessory cells (monocytes/macrophages) in order for Con A induced T cell mitogenesis to occur (Lee et al., 1976), the same need was demonstrated for fish leukocyte cultures (Clem et al., 1985). This requirement for accessory cells in the murine system was attributed to IL-1, which was provided by monocytes or macrophages and was a necessary T cell co-mitogen with the Con A. This was confirmed by eliminating the need for accessory cells when the culture media were supplemented with interleuidn-1 (Chu et al., 1985). Again, a similar experiment was done with fish (El laser, 1989). Macrophagedepleted channel catfish lymphocyte cell cultures supplemented with lipopolysaccharide (LPS) conditioned culture media were found to respond as well to Con A as did macrophage intact cultures. The same paper goes on to show that human or murine IL-1 can substitute for accessory cells in catfish and that antibodies against human IL-1 can 17 block this activity . Purification of the catfish IL-1-like factor from monocyte CMS revealed two forms with molecular weights of 15 and 70 k Da. The 15 k Da protein was active on the murine T lymphoma line LBRMSS-1AS used for the detection of human and murine interleukin -1 (Klaus, 1987). The 70 k Da protein was active only on catfish cells. Western blot analysis also confirmed that the isolated catfish proteins with IL-1-like activity cross reacted with antibody to human IL -1. Recently, IL-1-like factors have been characterized for carp (Cyprinus carpio) (Verburg-van Kemenade et al., 1995). Macrophage CMS were similar to the channel catfish material in that they contained specified proteins with IL -i activity . The supernatants tested positive for IL-1 bioactivity in both fish cells and the IL-1 dependent murine cell line D10(N4) bioassay system. Sheep-derived polyclonal antisera to human IL-1 was able to nullify the activity in the supernatants in both assay systems. Western blot analysis results were similar to the catfish study in that two proteins were revealed, with respective molecular weights of 15 k Da and 22 k Da. Accessory cell replacement factors like IL-1 have been demonstrated for rainbow trout (Ortega, 1993). In contrast to the catfish and carp studies, it was shown that purified human and not murine IL-1 affected trout lymphocytes as measured by in vitro antibody response to defined antigens after glucocorticosteroid suppression (Tripp, 1987). Two studies cite the specific presence of a rainbow trout IL-1-like protein antigenically similar to human IL-1. Both use commercially available ELISA based kits for the detection of human cytokines in serum or tissue culture samples. The first such study used supernatants from mitogen (Con A or LPS) stimulated rainbow trout lymphocyte cultures and found elevated levels in stimulated cultures (Ahne, 1994). The second study analyzed serum levels of IL­ 1 after in vivo infection with virus and detected elevated IL-1 levels relative to those of non-infected fish (Ahne, 1994). 18 Interleuldn-2 Interleukin-2 (IL-2) was first defined as a growth-promoting factor for bone marrow-derived T lymphocytes secreted from leukocyte cultures stimulated with T-cell mitogens (Morgan et al. 1976). It has since been recognized as a pleiotropic cytokine exhibiting various effects on a multitude of cell types. These include not only the growth and differentiation of T cells but also B cells, natural killer (NK) cells, monocytes, macrophages, lymphokine activated killer (LAK) cells and oligodendrocytes (Goldsmith and Greene, 1994). Unlike the situation with interleukin-1 or interferon, there are few reports of IL -2­ like activity in fish. The primary obstacle has been the definitive characterization of T cells in fish lymphocyte populations. Monoclonal antibodies which recognize unique T cell determinants such as those found on mammalian T cells have not yet been developed. This would be necessary for positive identification and isolation of T cells from heterogeneous populations of fish lymphocytes. Thus, most fish studies investigating IL2-like factors have been confined to the definition of factors produced by classical T cell mitogens on heterogeneous lymphocyte populations or surface immunoglobulin negative enriched populations. To add to this difficulty, the reports of the few studies that characterize fish derived IL-2-like activities are sometimes contradictory. The first two reports of IL -2 -like activity in fish used phytohemagglutinin-M (PHA), phorbol myristate acetate (PMA) and alloantigenic stimulation of carp head kidney or peripheral blood lymphocytes to generate factor containing CMS (Capsi and Avatalion, 1984; Grondel and Hamersen, 1984). Both studies found that these types of CMS were mitogenic on putative T cell lymphoblasts while only weakly mitogenic for resting cells. This activity is similar to mammalian T cells in that activated cells respond to IL-2 to a greater extent than do resting cells (Gillis, 1978). Murine derived IL-2 from the EL-4 cell line did not affect fish lymphoblast growth, suggesting that IL-2 does not have the same 19 cross species activity of IL-1. In the catfish system, a similar finding for incompatibility of murine IL-2 was shown (Clem et al., 1990). In this case, culture supernatants from catfish putative T-cell lines did not effect the mouse CTLL cell line used to assay for mouse IL-2. When recombinant mouse IL-2 was tested on catfish cells, it also had no mitogenic effect on the fish cells. In contrast, it was reported by Caspi and Avtalion, 1984 that rat, human and monkey cell line derived IL -2 containing supernatants did induce a mitogenic response in carp T lymphoblasts. Yet, in the same study when partially purified human IL-2 was used on carp cells no effect was seen. It becomes more confusing when the data from the study done by Ahne, 1994 is considered. In this study IL-1 and IL-2 were detected in trout sera using anti-human interleukin monoclonal antibody based ELISA kits. IL-1 and IL -2 were detected in sera from virus infected rainbow trout and in trout cell derived CMS. It is difficult to understand why IL-2 containing CMS from rat, monkey and human would affect fish cells but not purified mouse or human IL-2 as demonstrated by Caspi and Avtalion, 1984. This appears to be in contradiction with Ahne' s findings that trout IL-2 is detected by anti­ human IL-2 monoclonals. A probable explanation lies in the composition of the various CMS from rat, human and monkey. Since they are crude supernatants known to contain IL-2, it is also likely that they contain some of the many interleukins which support T cell growth (refer to Table 2.1). These may be the interleukins detected in Caspi and Avtalion in vitro assay system and not IL-2. It is also possible that the CMS contained small amounts of IL-2 which acted in a synergistic fashion with other T cell growth promoting cytokines present in the mixture. The synergistic affect of different cytokines has been demonstrated in mice (Vilcek and Le, 1994). It is possible that the IL-2 from human or mouse though antigenically similar, demonstrated by Ahne, are insufficiently cross reactive to effect fish cells without the presence of complimenting cytokines, which would be present in the rat, monkey or human cell CMS mixtures tested. 20 Molecular Evidence of Cytokines in Fishes There are only two reports of fish cytokine genes which have been cloned by designing primers to homologous regions of mammalian cytokine gene sequences and employing PCR amplification to obtain a cDNA clone. One possible reason that it has been so difficult to clone these genes is that such fish genes may not be sufficiently similar to the mammalian genes, and the primers designed for PCR amplification do not attain the necessary binding required for the detection of the particular cytokine gene (Secombes, 1994). It has also been suggested that an alternative method for isolating cytokine genes from fish could be more successful (Secombes, 1994). In vitro analysis of gene products screened from cDNA libraries has often been successfully employed in mammals to obtain different cytokines (Yokota et al., 1985) and the same method might prove valuable for fish systems. Actually, both methods have been used successfully to isolate IL-2, INF, NKEF and STAT like genes from two species of fish, flatfish (Paralichthys olivaceus) (Tamai et al., 1992 and 1993) and rainbow trout (Oncorhynchus mykiss) (Mourich et al., 1995). Interferons Human INF cDNAs have been used as probes in Southern blot analysis to detect if cross hybridization occurs with genomic DNAs isolated from a number of vertebrates including fish (Wilson et al., 1983). Both INF-a and INF-13 probes were used to distinguish what gene families might be conserved in the various animals. Complex multigene families were detected in all mammals tested for INF-a but no such genes were detected in fish. However, under low stringency hybridization condition, gene sequences related to INF -13 could be detected in perch, minnow, dace and the stone loach. This molecular evidence, along with a number of biological studies (to be discussed later), 21 strongly suggests that INF genes are present in fish, but share limited sequence homology mammalian gene sequences. An INF-like gene from flatfish has been cloned and expressed by the method of cDNA library screening (Tamai et al., 1993). A cDNA library was constructed from mRNA isolated from a flatfish leukocyte line immortalized by the transfection of human c­ fos and c-ras oncogenes (Tamai et al., ESACT proceedings in press). Gene products were expressed in an in vitro translation system and assayed for INF bioactivity on EPC cells against Hirame rhabdovirus. The INF gene was isolated, sequenced and inserted into a mammalian expression vector for production in a transformed BHK-21 cell line. The complete nucleotide sequence for the flatfish INF cDNA contained a single open reading frame coding for a 138 amino acid polypeptide which was determined to have a molecular weight of 16 k Da by SDS-polyacrylamide gel electrophoresis. Comparison of the flatfish INF amino acid sequence to various mammalian alpha and beta INFs showed little conservation. The highest degree of homology 24 % was with the human INF-a gene. Conservation with human INF-13 protein was much less, with only 14 % identity. This is contradictory to the findings of Wilson and coworkers, 1993 that human alpha INF families are not detectable in fishes. However, flatfish genomic DNA was not used in their analysis. The flatfish INF-like protein shared little sequence homology with mammalian INFs and appeared antigenically and chemically dissimilar. Antiserum to human INF-a or INF-13 did not cross-react with the flatfish protein. Furthermore, the flatfish protein was not stable to pH 2.0, at which pH type I INFs are stable. It may be that the flatfish protein described by Tamai and co-workers, is not a type I but a type II INF. The protein has more of the attributes of a type II interferon since it is derived from leukocytes is acid labile and yet still retains anti-viral activity. Although this may be possible, no such sequence or bioactivity comparisons were made in this report. 22 Interleukin-2 Interleukin-2 cDNAs have been isolated, cloned and sequenced from a number of species including human, mouse, rat, cow, gibbon, sheep and pig (Taniguchi et al., 1983; Kashima et al., 1985; McKnight et al., 1989; Chen et al., 1985; Reeves et al., 1986; Seow et al., 1990 and Goodall et al., 1991). A significant degree of amino acid homology (44 %) exists among all seven species, including the positional conservation of three cysteine residues (Goldsmith and Greene, 1994). The primary polypeptide has an average length of 153 residues with the exception of the mouse IL-2 which has an insertion of 14 residues beginning at residue 27 (Kashima et al., 1985). The primary polypeptide undergoes several postranslational processing events which are essential for bioactivity. There is a cleavage of the first 20 residues which acts as a signal peptide. There is an addition of carbohydrate to the threonine residue at position 3 and the formation of a disulfide bond between the cysteines at positions 58 and 105 (Robb et al., 1983). The final 15.5 k Da protein is almost exclusively produced by activated T cells, but some reports suggest that activated B cells also have a limited ability to produce IL-2 (Taira et al., 1987; Walker et al., 1988). Only one report of a fish derived IL-2-like cDNA has been made to date. This gene was cloned from the genomic DNA of the Japanese flat fish by PCR amplification, using primers designed to well conserved regions of the gibbon, mouse, human and bovine IL-2 sequences (Tamai et al., 1992). The homologous regions included conserved intervening sequences, introns, found in the genomic sequences of the various interleukin-2 genes. Three PCR product were produced from three different primer pairs. The PCR products were independently cloned into pUC119 and the inserted sequences were determined. The sequences were joined through a process that was not well described to generate the full length cDNA. The final sequence was inserted into a mammalian expression plasmid vector and the recombinant plasmid was used to transform COS-1 cells for expression into 23 culture supernatants. The final cDNA encoded a polypeptide consisting of 102 residues with a predicted molecular weight of 10.28 k Da that was bioactive on flatfish PL51 lymphocyte putative T cell line. A comparison of the predicted amino acid sequence of the flatfish to mouse, gibbon and human demonstrated a relatively significant degree of homology of 42 %. Although the homology was significant, the flatfish IL-2 gene was missing some of the essential amino acid residues that have been found to be necessary for mammalian IL -2 biological activity. Only two cysteines are encoded in the flatfish IL-2, not three as in mammals, which are not in the correct position to form the internal disulfide bond necessary for IL -2 protein structure. Also although there was an amino terminal glycosylation site the position of the threonine residue was not conserved with mammalian IL-2s. The flatfish IL-2 gene appears to be related to mammalian interleukins to a limited degree. However, most of the literature citing IL-2 activity in fish and cross reactivity with mammalian interleukins suggests that fish IL -2 would not be closely related to mammals . Enhancing Factors of Natural Killer Cells Natural killer (NK) cells have been well defined in mammals (as reviewed by Trinchieri, 1989). The presence of these cells was first observed in studies dealing with cytotoxicity of normal human lymphocytes on both allogeneic and syngeneic tumor cells (West et al., 1975). It was found that in the absence of pre-sensitization of the responding effector population to the target tumor line, spontaneous cytotoxicity was rapid and unrestricted by MHC recognition. This non-adaptive, non-MHC-restricted cell mediated cytotoxicity was defined as "natural" cytotoxicity and the effector cell responsible for this activity was defined as the natural killer (NK) cell. Although the lineage of these cells still remains unclear, they have been characterized, along with their functional activity, as large granular lymphocytes that are CD3, CD4 negative and CD16, CD56 positive (Trinchieri, 24 1994). The central role of NK cells is immune surveillance to eliminate neoplastic tumors, virus infected cells and various microbial organisms (Ritz et al., 1988; Trinchieri, 1989). Also, NK cells are involved in immune development by the regulation of hematopoiesis (Janeway, 1989). NK cell are less well defined in fish, since there are no distinguishing surface markers available for fish lymphocytes. However, similar physiological and biological attributes have been described for a fish lymphocyte population termed "nonspecific cytotoxic" (NC) cell. First demonstrated in various warm water fish species and soon after in studies with channel catfish, leukocytes were able to lyse tumor cell lines in a non-MHC­ restricted manner (Hinuma et al., 1980; Graves et al., 1984 and Evans et al., 1984). Some biophysical aspects of this cell type have demonstrated similarities to NK cells such as cell density, non-adherency, and a lack of phagocytic activity (Evans et al., 1984; Evans et al., 1987). Metabolic requirements for the cytolytic activity and the effect of antibody on NC cells suggests that these cells are the piscine counterpart to the mammalian NK cell (Carlson et al., 1985). The NC cell of channel catfish has also been shown to eliminate parasitic infections in a similar fashion to mammalian NK cells (Graves et al., 1985). Non-specific cytotoxic cell activity has also been demonstrated with lymphoid cells in other fish species. For example, damselfish lymphocytes have been shown to have lytic activity against neurofibromas (Mckinney and Schmale 1994). Also, various species of salmonids have lymphoid cells with NC activity. In rainbow trout, NC cells exhibit cytolytic mechanisms of apoptosis, necrosis and MHC-unrestricted recognition of human, mouse and teleost target cells (Greenlee et al., 1991). The role of NC cells in virus resistance was demonstrated by enhanced killing of infected allogenic target cells by rainbow trout, Atlantic salmon (Salmo salar ) as well as golden shiner (Notemigonous crysoleucas) leukocytes (Moody et al., 1985). Because of these functional and physical similarities, it has been suggested that fish NC cells are phylogenetic progenitors of the mammalian NK cell (Evans et al., 1992). However, a 25 number of distinguishing properties warrant the separate name designation. The NC cells of channel catfish are different from NK cells of mammals in killing kinetics, radiation sensitivity, temperature optima and a lack of cytoplasmic granules (Evans et al., 1984; Carlson et al., 1985). Various studies with teleost have used lectin stimulation to enhance the activity of nonspecific cytotoxic cells. Lectin-dependent cell mediated cytotoxicity (LDCC) enhancement attributed to NK cell activity has been demonstrated in mammals (Bevan et al., 1975; Bonavida and Bradley, 1976; Rubens and Henny, 1977 and Davignon and Laux, 1978). As well, enhanced activity of rainbow trout (Oncorhynchus mykiss) and brook trout (Salvelinus fontenalus) NC cells has been demonstrated by the addition of phytohemagglutinin (PHA) to culture media conditions (Hayden and Laux, 1985). PHA and concanavalin-A (Con A) have been shown to have similar effects on carp and channel catfish NCC activity (Evans et al., 1992; LeMorvo-Rocher et al., 1994). Besides lectins, infection of target cells virus (Hergerman et al., 1977) or certain microorganisms (Wolfe et al., 1976) and exposure to a number of different cytokines (as reviewed by Trinchieri, 1989) can also affect the in vitro or in vivo activity of NK cells. Several cytokines manifest these effects on NK cells but those that have been observed to have a "direct effect on increased killing capacity" are type I and II interferons (Lucero et al., 1981; Perussia et al., 1980 and Weigent et al., 1982), tumor necrosis factor (Ostensen et al., 1987), interleukin-2 (Trinchieri et al., 1984), interleukin-4 (Nagler et al., 1988), interleukin-7 (Edington, 1994), interleukin-12 (Naume, et al., 1992) and a newly cloned and characterized factor termed natural killer enhancement factor (NKEF) (Shau et al., 1994). The presence of an uncharacterized natural killer enhancement factor was first postulated when it was observed that red blood cells (RBCs) played a role in the modulation of NK mediated lysis (Shau and Golub, 1988) and the growth and activity of IL -2 activated killer (LAK) cells (Yannelli et al., 1988). Shau and Golub carried out 26 specific in vitro experiments to observe the effects of RBCs on NK activity. They determined that the cytotoxicity of NK cells was enhanced in a dose dependent fashion based upon the number of RBCs present in cytolytic assays, whether from autochthonous, allogeneic or xenogeneic sources. Enhanced killing was seen against two NK sensitive tumor cell lines K562 and U937 in three different assay systems, chromium release, lactate dehydrogenase release and inhibition of thymidine incorporation. Yannelli and co-workers (1988) made a similar observation during clinical studies of cancer patients receiving IL-2 leukophoesis therapy. This type of therapy involved the removal and purification of peripheral blood lymphocytes from 40 different patients followed by in vitro exposure to IL-2. It was found that the number and cytolytic potential of LAK cells decreased as more autologous RBCs were removed during the culturing period. Shau and co-workers went on to identify and characterize the factor in RBCs influencing the growth and activity of natural killer cells (Shau et al., 1993). Red blood cell proteins were precipitated by ammonium sulfate and fractionated by gel filtration high performance liquid chromatography (HPLC). The individual fractions were tested for NK enhancement and it was determined that the factor was a trypsin sensitive cytosolic protein with a native molecular weight between 300 and 400 kDa. Under SDS-PAGE denaturing conditions the protein gave an apparent molecular weight between 48 and 24 kDa. The purified proteins were used to immunize rabbits to produce polyclonal antiserum. This antiserum was then used to determine if the activity induced by the protein could be specifically inhibited by pre-incubation. Immune anti-serum was found to inhibit the enhancement activity while control rabbit serum had no effect. The serum to the newly termed "natural killer enhancing factor" (NKEF) was also used to detect the presence of NKEF in the cytosol of the NK-sensitive erythroleukemic cell line K562 by western blot analysis. Both K562 and red blood cells produced a reactive band at 24 kDa. Tryptic digests of NKEF were then made and three peptides were isolated and sequenced. 27 Computer searches of protein data bases revealed that one peptide was related to a known protein of a murine erthroleukemia-related gene MER5 (Yamamoto et al., 1989) (Swiss Protein accession number P20108). Using the anti-NKEF serum in a immunoblot screening technique, Shau's group probed a lambda gtl l cDNA expression library derived from the K562 cell line. Two closely related genes, sharing 88 % amino acid and 71 % nucleotide identity, were isolated and termed NKEF A and B (Shau et al., 1994). Analysis of the predicted amino acid sequences indicated several phosphorylation sites and no glycosylation sites. Computer analysis of gene sequences revealed several homologous proteins from a variety of organisms ranging from prokaryotes to mammals. The previously examined MER5 protein shared 61 % and 64 % identity with NKEF A and B respectively. One protein, mouse macrophage stress related protein (MSP23) (Ishii et al., 1993) (GenBank accession number D16142), exhibited a noteworthy degree of identity, 93 % and 76 %, with the respective human NKEF A and B proteins. The function of this 23 k Da protein is yet to be fully characterized but it has been found to be expressed by murine macrophages exposed to hydrogen peroxide (Sato et al., 1993). Two other genes, related to the NKEF gene sequence, appear to also be involved in responses to oxidative stress conditions in the cell. The thiol-specific antioxidant gene protein product (TSA) (Chae et al., 1993) (GenBank accession number S64263) of Saccharomyces cerevisiae is 57 % identical to NKEF A and 66 % identical NKEF B and has been shown to be oxygen-inducible with anti-oxidant activity (Kim et al., 1989). Also, the alkyl hydroperoxide reductase C22 subunit gene (AHPC) of Salmonella typhimurium shares 34 % and 30 % amino acid identity with NKEF A and B proteins respectively. The expression of this gene has been shown to be under the control of the regulatory element OxyR which up regulates the expression nine other genes in S. typhimurium responsible for controlling oxidative stress (Tartaglia et al., 1990). 28 Although no other function has been identified for the human NKEF proteins besides the enhancement of NK activity, it has been postulated by Shau that since related proteins are so well conserved throughout evolution, NKEF A and B may also be involved in coping with oxidative stress in RBC and other cells. A newly reported gene with significant homology to human NKEF has been found in rainbow trout (Mourich et al., 1995). This gene sequence shares 79 % and 72 % nucleotide sequence identity and 75.5 % and 71 % amino acid identity with human NKEF A and B, respectively. The trout gene protein product (NCEF), produced by in vitro translation has a molecular weight similar to that of the human proteins, 25 k Da by SDS-PAGE. Western blot analysis with monoclonals specific for either the A or B NKEF demonstrates that the trout protein is related antigenically to both human proteins. To determine if the trout protein was functionally related to human NKEF, effects on NCC activity were tested by radio-labeled chromium (51Cr) release and DNA fragmentation of target cells. The NCEF gene was sub cloned into a eukaryotic expression plasmid under the control of a CMV promoter and transfected into a salmonid cell line CHSE-214 by lipid-DNA complex. The expression of NCEF in the transfected cell cultures was confirmed by immunohistochemistry with a cross reactive monoclonal that recognizes both NKEF A and B in native form. Enhanced cytolysis of the 51Cr labeled target cells expressing NCEF was seen for lymphocytes from trout pronephros (head kidney), spleen and peripheral blood. Also, a similar increase in apoptotic killing measured by DNA fragmentation was seen in target cultures expressing NCEF. Cytokine Signal Transduction Cell to cell communication is mediated in part through membrane bound receptors. Some receptors are specific for soluble factors, for example cytokines, produced by cells of the immune or hematopoietic systems (Hamblin, 1993). The binding of a cytokine to its 29 cognate receptor induces receptor dimerization and the subsequent triggering of intercellular signaling molecules, "secondary messengers" (He ldin, 1995). The resulting effect is the rapid and selective transcriptional activation of target genes regulated by specific cytokine exposure. The protein products derived from these genes control cellular functions such as growth, differentiation or effector states (Sabath et al., 1990). The step in this process between cytokine-receptor binding and gene activation or "signal transduction" has recently become a focus of study in immune regulation. It has long been known that the phosphorylation state of various cytoplasmic proteins are involved in signal transduction. However, the specific protein kinases and substrates mediating this process remained unknown in earlier studies (Hatakeyama et al., 1991). Since the intracellular domains of cytokine receptors lack cytoplasmic catalytic domains, other receptor associated protein were thought to be "recruited" to transmit secondary signaling processes (Torigoe et al., 1992; Venkitaraman and Cowling, 1992). A study examining the signaling properties of cytokine receptors demonstrated the presence of two important cytoplasmic domains which interact with catalytic proteins. The membrane distal domain was shown to be involved in the activation of the Ras pathway, while the membrane-proximal domain was shown to activate tyrosine protein kinases (Ih le and Kerr, 1995). The tyrosine protein kinases that associate with cytokine receptors and function in these pathways were identified in earlier studies as kinases belonging to the Janus family (Jak) (Argetsinger et al., 1993; Russell et al., 1994). Cytokine receptor binding activates Jak proteins which in turn catalyzes the phosphorylation of a class of transcriptional factors termed "signal transducers and activators of transcription" (STAT) proteins. Phosphorylation of STAT proteins results in their rapid dimerization, nuclear translocation and association with secondary transcriptional factors. These protein complexes will then bind to specific sequences found in the promoters various target genes which results in active gene transcription. (Darnell et al., 1994). 30 To date six different STAT proteins (STAT 1-6) have been characterized and identified. These have been shown to be involved in the signal transduction of several different cytokines including; INF a, INF 13, IL-2, IL-4, IL-6, IL -7, IL-10, IL-12, IL-13, IL-15 (as reviewed by Ivashkiv, 1995) and growth factors EGF and prolactin (RuffJamison et al., 1995; Gilmor and Reich, 1994). At this time little information on signal transduction of cytokines and cytokine-like factors in teleost fishes is available. In chapter 5 of this thesis we report on a partial gene sequence derived from rainbow trout (Oncorhynchus mykiss) that closely resembles the signal transduction and transcription activating factor STAT5 found in various species of mammals. STAT5 is involved in the signal transduction process of interleukins 2, 7 and 15 (Lin et al., 1995). Cells expressing the corresponding receptors will respond to these cytokines by Jak driven phosphorylation of Src homologous-2 (SH2) domains in STAT5 proteins (Frank et al., 1995). Trans location to the nucleus and binding to promoter sequences containing the consensus inverted repeat G/TAA structure called the y-INF­ activation site (GAS) results in the rapid transcriptional activation of these genes (Gilmor and Reich, 1994). Interleukin-2 as well as mitogenic stimulation have been shown to rapidly induce nuclear translocation and DNA binding activity of STAT5 in freshly isolated PBLs. This binding activity appears to be transient since it drops off dramatically only hours after stimulation (Hou et al., 1995). The tissue distribution of STAT5 has also been determined (Lin et al., 1995). Northern blot analysis demonstrates active transcription of STAT5 gene in heart, placenta, lung, muscle, spleen, thymus , prostate, testis, ovary, intestine, colon and peripheral blood lymphocytes. However, transcription of STAT5 is undetected in the brain, liver, kidney and pancreas. 31 CHAPTER 3 NATURAL KILLER CELL ENHANCEMENT FACTOR-LIKE GENE IN RAINBOW TROUT (Oncorhynchus mykiss) Dan V. Mourich, John Hansen and Jo Ann Leong* Department of Microbiology and the Center for Salmon Disease Research, Oregon State University, Corvallis, Oregon 97331, U.S.A. *Correspondence should be addressed to this author Published September 1995 Immunogenetics 42 (5):438-439 32 Introduction Two closely related human genes termed natural killer enhancing factor A and B (NKEF) encode cytosolic proteins expressed in both human red blood cells and the natural killer sensitive erythroleukemic cell line K562 (Shau et al. 1993). These proteins are found to augment the cytolytic effects of human natural killer (NK) cells (Shau and Golub 1988) and increase yields of lymphokine activated killer (LAK) cells (Yannelli et al. 1988). When the deduced amino acid sequences of NKEF A and B were compared to deposited sequences, significantly related regions were found in genes of other unrelated species such as bacteria, amoebae, yeast and mice (Shau et al. 1994). This high degree of sequence conservation through a broad evolutionary range of species suggests that it may be possible to amplify related gene segments from trout cDNA using primers designed to these conserved regions. Primers were constructed from two homologous protein motifs found within the various sequences. These primers were then used in the polymerase chain reaction (PCR) to amplify a product from a trout derived peripheral blood cell cDNA pool. The 5' primer ME 244 was constructed using the coding sequence for the motif FVCPTE which is 100 % homologous in all species compared. The 3' primer ME 245 is complementary to the coding sequence for the motif WKPGSDT. This primer is 100 % homologous to the human NKEF genes and the mouse gene MSP23 (D16142), but is less well conserved in the other related genes. A PCR product of the predicted size [405 base pairs (bp)] was visible in an ethidium bromide stained agarose gel. The band was excised and ligated into the TA cloning vector (Invitrogen). Plasmid clones were screened for insert and prepared for T7 and SP6 primer sequencing. 33 Comparison of the nucleotide and predicted amino acid sequence of the trout derived clone with the human NKEF sequences demonstrated a high degree of conservation for the region amplified. The putative trout NKEF gene segment was then labeled with 32 P-dCTP and used as a probe to screen a cDNA library derived from trout peripheral blood cells. A full length clone of 1127 by was isolated and sequenced. The nucleotide and amino acid sequence shown in figure 1 confirms that the trout gene shares a high degree of identity with both human NKEF A and NKEF B deduced coding sequences. Specifically, the trout NKEF shares 79 % and 72 % nucleotide identity and 75.5 % and 71 % amino acid identity with human NKEF A and B, respectively. Mammalian Natural Killer (NK) cells are defined as large granular lymphocytes that are CD3, CD4 and CD16 negative, whose central role is immune surveillance (Ritz et al. 1988). Their functions include MHC unrestricted recognition and elimination of neoplastic tumors, virus infected cells and various microbial organisms, through cytolytic mechanism of apoptosis and necrosis (Trinchieri 1989). NK cells are less well defined in fish due of the lack of surface marker reagents. However, similar biological activities of cytolysis have been described for a nonspecific cytotoxic cell (NCC) found in various teleost, such as channel catfish (Evans et al. 1984) and salmonids (Moody et al. 1985). Also NC cells of channel catfish, like mammalian NK cells, function in the elimination of some microorganisms (Graves et al. 1985). Tumor recognition of Damsel fish NC cells has been demonstrated by cytotoxicity toward neurofibromas (McKinney and Schmale 1994). In the specific case of rainbow trout, NC cells have exhibited cytolytic mechanisms of apoptosis, necrosis and MHC unrestricted recognition of human, murine and teleost target cells (Greenlee et al. 1991). From this functional related evidence, it has been postulated that the NC cells of fish are phylogenetic progenitors of the mammalian NK cell counterpart (Evans et al. 1992). These cytolytic cell types from two phylogenetically different taxa not only share common biological mechanisms of cytolysis and surveillance but it is now evident that a specific gene involved in the regulation of these functions is also closely related. 34 Figure 3.1 Complete nucleotide sequence of trout NKEF-related clone. Alignment of deduced amino acid sequences for trout (Gen Bank accession number U27125), Human A (L19284) and Human B (L19185) natural killer cell enhancing factors. The primers used for amplification of the initial trout derived probe are shown in upper case. (-) indicates identity with the human sequences. (*) indicate deletions. 35 44 Trout 5'gagcaagctgccgcagtgggaccgaagtagaggcaaaagtgaag atggctgcaggtaaagcacgaatcgggcatctggcccctggcttcacggccaaagcagtgatgccagacggccagttcaaagacatcagc t--t t t c- -t t c-ct caa aaHumanA ---t--t- -a--t--taa -t **t- t- -gcc c- -g- g a a as -g ca 99 9 ag Human8 c g -c ct-c Trout TroutMAAGKARIGHLAPGFTAKAVMPDGQFKDIS HumanA HumanB S S - K N S N K T D K T V A * - E V TroutM5DYRGKYVVEFFIPLDFTFVCPTEITAFS Trout HumanA HumanB Trout HumanA HumanB A A E E R F R K I G K - L N C E V Q G A S V D S H F C H L A W -L -V -- L D I T N V T cctcgtaagcacggtggtctgggtgccatgaagattcctctggtagccgacacaatgcgttccatctccacggactatggggtgtttgaa c a*­ ca tg-tca- t c t t-a- -c-g-a at HumanA ---aag--a -a--a- a c--c--c---c-t-gt---gtg-cca-acg-t-g--tga---t--c--c---c-*--- HumanB --c--q--ag-g- a at- -gc c TroutPRKHGGLGAMKIPLVADTMRSISTDYGVFE -5-PK-T-AQ-LG-VT-RL-EK Q P - N E P L N - L K L K ggagggatgagggcatcgcctacagggggcctttttatcattgacgacaagggcgtcttgaggcagatcaccatcaacgatcttccggtg Trout * tg a--t--c-c---cLgt to -tc-tc t -t t g t HumanA -ct *- -a tg-t--t---t-g--t--- c -t -g t- c-tc-c c t * HumanB aaca . Trout GGMRASPTGGLFIIDDKGVLRQITINDLPV HumanAADEGI-FR- * V V I HumanEITCKGIAYR- * G 3.ACCTTTGOA ggacggtgcgttgacgagatcctqcgtctggtgcaggcctttcagttcactgacaaacacggagaagtctgtcctgccggctggaaacca t g c--a -t t g c ctt -a a a t HumanA t-c--c-ct--g--t t c--t g t c- -a- -a- -g-g- t g g c gct c-c- -g t HumanB R C V D I L R L V Q A F Q F T D K H G E - C P A G W 120 494 150 K P 584 180 A CCGTCACTATGG 5.ME 245 ggaagtgataccatcaagcccgacgtgcagaagagcaaagacttcttctccaagcagcagtaa­ Trout a g -c t- t -c-ca a-at HumanA -c a -ca-t-g­ g tg-c g a-at a c--g--t HumanB -c TroutC5DTIKPDVQKSKDFFSKQQ* -K. P -T-EYHumanA HumanB V 404 T 5 5 E 90 C P Trout G Trout HumanA C HumanB 314 I Trout HumanA HumanB 60 L R N 224 L K K gacgctgccgaggagtttaggaagatcggttgtgaggtcattggtgcctctgtcgattcccacttctgccatcttgcttggaccaacaca t a--a---gt---t--- t t g tagg a -a a- -a- -ac- aac--cc a g t c -aa- c g a -gc-g--c-t -g g- c t g c cc-c -c-g--c -a a-- cg D 30 K 5.TTTGTGTGCCCCACGGAG 3'ME244 atgtctgattacagagggaagtatgtggtgttcttcttctacccgctggacttcacctttgtgtgccccactgagatcatcgccttcagt Trout t -t g t t t t ca -a--a HumanA c t c g c t c cc- -t a g c HumanB cHumanA L HumanB L 134 N -DD- - E Y - 647 200 -HN. gacgacacatgtctgaagcctgctgtaggacagctagaattacagtacatttcaagagaacaatggtgaagagcagtagcctacctctgtgcctgag actgtagaacaacatcttcagcatccccttatctcatgtgtttgggtagagtggaaattattatgaccaaactatgaagattatattaacgtatagc ttggagatgttttatattgtagtcatttagcagacactcttatcttagtgtcattgatgtcggcctattttattcttctgtatcatttttgtaacat ctgaggtggacattcgtttttgcctttaggccacagatgggatagtctgaaatgaggaacagaagctttacaggacaaaacttgtggcgaaaactcc 1127 agttagctttttgtctctttatttacaactcaatgtcattcatcttctaaataaacactttacaaaggcaaaaaaaaaaaaaaaaaaaa Figure 3.1 36 Acknowledgments This study was supported by the United States Department of Agriculture to the Western Regional Aquaculture Consortium under the grant 92-38500-7195, project no. 92080441; an Oregon Sea Grant with funds from the National Oceanic and Atmospheric Administration, Office of Sea Grant, Department of Commerce, under grant NA89AA-D­ SG108, project R/FSD-16; grant NA36RG451, projects R/FSD-23 and Amend. No. 2; a grant from the National Institutes of Allergy and Infectious Disease, T32A107379; and a grant from the National Oceanic and Atmospheric Administration (Salton-Kennedy funds), NA46FD0490. Oregon Agricultural Experiment Station Technical Paper No. 10,761. References Evans, D. L., Harris, D. T., and Jaso-Freidmann, L. (1992). Function associated molecules on nonspecific cytotoxic cells: Role in calcium signaling, redirected lysis, and modulation of cytotoxicity. Dev. Comp. Immunol., 16: 383-394, Evans, D. L., Graves, S., Cobb, D., and Dawe, D. L. (1984). Nonspecific cytotoxic cells in fish (Ictalurus punctatus), II. Parameters of target cell lysis and specificity. Dev. Comp. Immunol., 8: 303-312. Graves, S. S., Evans D. L., and Dawe D. L. (1985). Mobilization and activation of nonspecific cytotoxic cells in the channel catfish infected with Ichthyopthirius multifiliis.. Dev. Comp. Immunol., 8: 43-51. Greenlee, A. R., Brown, R. A., and Ristow, S. S. (1991). Nonspecific cytotoxic cells of rainbow trout (Oncorhynchus mykiss) kill YAC-1 target cells by both necrotic and apoptotic mechanisms. Dev. Comp. Immunol., 15: 153-164. McKinney, E. C., and Schmale, M. C. (1994). Damselfish with neurofibromatosis exhibit cytotoxicity toward targets. Dev. Comp. Immunol., 18: 305-313. Moody, C. E., Serreze, D. V., and Reno P. W. (1985) Nonspecific cytotoxicity activity of teleost leukocytes. Dev. Comp. Immunol., 9: 51-64. Ritz, J., Schmidt, R.E., Michon, J., Hercend, T., and Schlossman, S. F. (1988). Characterization of functional surface structures on human natural killer cells. Adv. Immunol., 42: 181-211. 37 Shau, H., Gupta, R. K., and Golub, S. H. (1993). Identification of a natural killer factor (NKEF) from human erythroid cells. Cell. Immunol., 147: 1-11. Shau, H., and Golub, S. H. (1988). Modulation of natural killer-mediated lysis by red blood cells. Cell. Immunol., 116: 60-72 Shau, H., Butterfeild, L. H., Chiu, R., and Kim, A. (1994). Cloning and sequence analysis of candidate human natural killer-enhancing factor genes. Immunogenetics., 40: 129-134. Trinchieri, G. (1989). Biology of natural killer cells. Adv. Immunol., 47: 187-376. Yannelli, J. R., Thurman, G.B., Mrowca-Bastin, A., Pennington, C. S., West, W. H., and Oldman R.K. (1988). Enhancement of human lymphokine- activated killer cell cytolysis and a method for increasing lymphokine-activated killer cell yields to cancer patients. Cancer Res., 48: 5696-5700. 38 CHAPTER 4 CHARCTERIZATION OF A NON-SPECIFIC CYTOTOXIC CELL ENHANCEMENT GENE PRODUCT (NCEF) IN RAINBOW TROUT (Oncorhynchus mykiss ) Dan V. Mourich and Jo Ann Leong* Department of Microbiology and the Center for Salmon Disease Research, Oregon State University, Corvallis, Oregon 97331, U.S.A. *Correspondence should be addressed to this author (for submission to Cellular Immunology) This Paper reports a portion of the work encompassed by a thesis submitted to Oregon State University, Department of Microbiology, in partial fulfillment of that required for the degree of Ph. D., for Dan V. Mourich 39 Abstract The nonspecific cytotoxic cell (NCC) of teleost fish is functionally related to the natural killer cells of mammals. A gene with significant homology to human natural killer enhancement factor (NKEF) genes was isolated from a cDNA library derived from rainbow trout head kidney cells. The sequence of this gene shares 79 % and 72 % nucleotide identity and 75.5 % and 71 % amino acid identity with human NKEF A and B, respectively. Here we demonstrate the structural and functional similarities of these two related gene products from phylogenically distant animals. A protein product derived from the trout cDNA (NCEF) by in vitro transcription and translation has a molecular weight (25 k Da by SDS-PAGE) similar to those of the two human proteins. Western blot analysis with three different monoclonal antibodies specific for the NKEF A or B proteins demonstrate that the trout protein is antigenically related to both human proteins. The NCEF gene was sub cloned into a eukaryotic expression plasmid under the control of a CMV promoter and subsequently transfected into the salmonid CHSE-214 cell line by lipid-DNA complex. Expression of NCEF in the transfected cell cultures was confirmed by immunohistochemistry with a cross reactive monoclonal that recognizes both NKEF A and B. The trout protein was determined to be functionally related to human NKEFs by effects on NCC activity tested by radio-labeled chromium (51Cr) release and thymidine­ labeled DNA fragmentation of target cells. Enhanced cytolysis of the 51Cr labeled, NCEF-expressing target cells was seen for trout derived lymphocytes from pronephros (head kidney), spleen and peripheral blood. Also, a similar increase in DNA fragmentation was seen in target cultures expressing NCEF. 40 Introduction Nonspecific cytotoxic cells (NCC) of various fishes have been postulated to be the teleost equivalent of mammalian natural killers cells (NK) (Lester et al., 1994). These cytolytic cell types from two phylogenetically different taxa share similar attributes. Among these are; the ability to lyse tumor cell lines in a non-MHC-restricted manner (Hinuma et al., 1980; Graves et al., 1984; Evans et al., 1984; Mckinney and Schmale 1994), the metabolic requirements for and antibody influence on cytolysis (Carlson et al. 1985), the elimination of parasitic infections (Graves et al., 1985), role in virus resistance (Moody et al., 1985) and cell destruction by apoptosis (Greenlee et al., 1991). Some biophysical aspects of NCC cells are similar to NK cells such as cell density, non-adherency, lack of phagocytic activity and surface molecules (Evans et al., 1984, 1987 and 1992). Although studies demonstrating lectin-induced enhanced activity of mammalian NK cells are similar for NC cells of fish (Hayden and Laux, 1985; LeMorvo-Rocher et al., 1994), no endogenously produced teleost factors have been shown to enhance NCC activity. Many substances besides lectins can effect the in vitro or in vivo activity of NK cells including infection with viruses and certain microorganisms (Hergerman et al., 1977 and Wolfe et al., 1976), and a number of cytokines (as reviewed by Trinchieri, 1989). Recently, a cytosolic protein expressed in both human red blood cells (RBC) and the natural killer sensitive erythroleukemic cell line K562 has been shown to augment the cytolytic effects of human natural killer (NK) cells (Shau et al., 1993) and increase yields of lymphokine activated killer (LAK) cells (Yannelli et al., 1988). High performance liquid chromatography (HPLC) purified RBC cytosolic protein preparations exhibiting this activity were used to produce polyclonal immune antisera (Shau et al., 1993). This antisera was used to screen a cDNA expression library derived from the K562 cell line. Two distinct genes, similar in nucleotide sequence were isolated and termed NKEF A and B. 41 Recombinant forms of these proteins added to in vitro assay conditions were shown to induce a significant increase in the killing activity of human NK cells (Shau et al. 1994). Previously we reported the sequence of a cDNA clone derived from a trout head kidney library that exhibited significant homology with both human NKEF gene sequences (Mourich et al., 1995). The isolation methodology is detailed in this report. In this present study we examined if the trout-derived NKEF-like gene product, termed NCEF, has antigenic and biological properties similar to the human NKEF proteins. Specifically, we expressed the trout gene in both prokaryotic and eukaryotic systems and tested for cross reactivity with monoclonals raised against the human isomers of NKEF. Also, enhancement of rainbow trout NCC activity was examined by measuring the necrotic and apoptotic destruction of cell cultures expressing either the NCEF or beta-galactosidase as a control protein. Methods and Materials Animals and Cell Lines Rainbow trout (Oncorhynchus mykiss ), Shasta strain, were obtained from the Food Toxicology Research Center at Oregon State University and maintained at the Center for Salmon Disease Research Laboratory in Corvallis, Oregon. The facility supplies pathogen-free water at a constant temperature of 120 C. Fish were fed Oregon Moist Pellet (OMP) commercial salmon food daily. Blood and tissues (anterior kidney and spleen) were obtained by aseptic sampling or dissection after lethal overdose anesthesia in benzocaine (ethyl p-amino-benzoate: Sigma). The Chinook salmon embryo derived cell line CHSE-214 (Lannan et al., 1984) was used as a target cell. The cells were maintained in RPMI-1640 media (Sigma) supplemented with 10 % heat inactivated fetal bovine serum (Intergen), antibiotics and L-glutamine (penicillin, 100 IU/mL; streptomycin, 100 ilg/mL; 42 and L-glutamine, 2 mM) (Gibco BRL). The cells and cellular assays were maintained at 17° C in an incubator culture chamber (C.B.S. Scientific) perfused with a blood gas mixture composed of 9.9% mol/mol CO2, 10.2% mol/mol 02 and 79.95 mol/mol N2. Leukocyte Isolation To obtain effector cells, leukocytes were isolated as a source of effector cells from peripheral blood, spleen and anterior kidney. Separate single cell suspensions of spleen or anterior kidney were prepared by mincing the tissues in a petri dish containing 10 mL RPMI-1640 and subsequently passed through a 100-mesh sieve. The cells were centrifuged and washed twice in 20 mL of media and suspended in final 12 mL of RPMI­ 1640. Whole blood collected in a heparinized vacuum tube was centrifuged to remove plasma. The packed blood cells were then washed twice with media and suspended to a final volume of 12 mL in RPMI-1640. All cell suspensions were underlayed with an equivalent amount of Histopaque-ficol 1077 (Sigma). After centrifugation, the white cells contained at the interface were removed and washed twice with supplemented media. Viability and number were determined by trypan blue exclusion. Cell number was adjusted by addition of supplemented media or by centrifugation followed suspension in new supplemented media. Generation of Rainbow Trout NKEF-like Probe Primers were constructed from two homologous protein motifs found within the human NKEF gene sequences. All primers were synthesized at the Oregon State Center for Gene Research and Biotechnology Central Services facility. The 5' primer ME244 = 5' ITTGTGTGCCCCACGGAG-3' was constructed using the coding sequence for the motif 43 FVCPTE. The 3' primer ME245 = 3'-ACCTTTGGACCGTCACTATGG-5' is complementary to the coding sequence for the motif WKPGSDT. These primers were used in the polymerase chain reaction (PCR) to amplify a product from a trout derived peripheral blood cell cDNA pool. Total RNA using the RNAso1 method ( Tel-Test, INC.) was isolated from a cell pack taken from 1 mL of trout peripheral blood. To produce a cDNA pool, a reverse transcription reaction was carried out on 2 pig of the isolated RNA in a 20 µL mixture containing ; 0.51.1g dT17-adapter primer [ ME102 = 5' GACTCGAGTCGACATCGA(T)17 3' ], 300 units MMLV RT, 10 units RNasin , 0.02 mM dNTPs and 1 X MMLV RT buffer (Promega). The reaction mixture was incubated at 37° C for 1 hour followed by 950 C for 5 minutes. The polymerase chain reaction was carried out in a 100 'IL reaction mixture containing; 2µL of the cDNA pool, 0.2 mM dNTPs, 511M primers ME244 and ME245, 1.5 mM MgC12, 50 mM KC1, 10 mM Tris­ HC1 (pH 9.0), 0.1 % Triton X-100 and 1 unit Taq polymerase (Promega). The mixture was overlaid with mineral oil and placed into a Themiolyne thermocycler (Barstead) for amplification. The reaction was heated to 950 C for 2 minutes after which 5 cycles of a low stringency initiation profile of [95° C for 1 min., 47° C for 1 min. and 72° C for 1 min. ], followed by 30 cycles of a high stringency amplification profile of [ 95° C for 1 min., 53° C for 1 min. and 72° C for 1 min.] were run. This was immediately followed by an over-hang extension incubation of 720 C for 10 minutes. Ten µL of the reaction mixture was analyzed by agarose gel electrophoresis. A PCR product of the predicted size [405 base pairs (bp)] was visible in an ethidium bromide stained gel. The band was excised and ligated into the TA cloning vector and subsequently transformed into E. coli according to manufacture's protocols (Invitrogen). Plasmid clones were isolated and screened for insert size by restriction enzyme digest analysis with EcoR I. Clones containing inserts of predicted size were then prepared for 77 and SP6 primer sequencing to confirm sequence homology to the human NKEF gene sequences. A single clone was selected, based on NKEF similarity, and used as a 44 homologous probe for screening a rainbow trout cDNA library. The rainbow trout pNCEF1 clone was digested with Eco R1, separated by agarose gel electrophoresis and the insert isolated in an agarose gel slice. This was subsequently purified (Geneclean; Bio 101), and again separated on an agarose gel, followed by a secondary purification. The twice purified insert was randomly labeled to an approximate specific activity of 1.5 x 109 cprns/pg with a 32P dCTP (ICN) using a commercially available kit (BRL, Gaithersberg, MD). Removal of non-incorporated nucleotides was done using a G-50 Quick-Spin column (BMB) prior to using the labeled probe for hybridization analysis or screening. Library Screening A rainbow trout Uni-ZAPXRII cDNA library derived from trout pronephros cells was used to isolate a full length cDNA clone encoding the gene related to human NKEF. The phage library was titered and plated on 150 x 25 mm petri dishes (Corning) so that each plate contained approximately 5 x 104 PFUs. A total of 1 x 106 PFUs (20 plates) were plaque-lifted onto BA-85-supported nitrocellulose (Schleicher and Schuell) per manufacture's protocol. The filters were pre-hybridized in a Techne Hybridiser HB-1D (Techne, Princeton, NJ) for 6 h at 580 C in a solution containing 5 x standard sodium citrate (SSC), 5 x Denhardt's solution , and 0.5% sodium dodecyl sulfate [(SDS) (w/v)]. Hybridization conditions were the same as prehybridization except for the addition to the a [32-P] dCTP labeled probe. Hybridization was allowed to proceed for 20 hr after which the filters were washed for 15 min. and again for 5 min. at 580 C in a solution containing 3 x SSC and 0.5 % SDS. All heated washes were carried out in a model 2564 heated shaking water bath (Forma Scientific). The filters were removed to a room temperature wash containing 0.2 x SSC and 0.2 % SDS for an additional 15 minutes. Autoradiographs of the hybridizing plaques were made with Kodak XAR-5 film. Positive plaques were located, selected and titered. Titers were adjusted to 50 and 500 PFUs for each positive 45 plaque selected and plated onto 100 x 20 mm petri dishes. Duplicate filter lifts were made for each plate as before and were pre-hybridized for 1 hr and hybridized in the presents of the labeled probe for 20 hr at 65° C in 3 x SSC and 0.5 SDS. Duplicate filters were split and washed under either a low stringency (42° C, 3 x SSC / 0.5% SDS) or a high stringency (65° C , 0.2 SSC/0.2% SDS) condition for 15 min. followed by a 15 min. room temperature wash in 0.2 x SSC and 0.2 % SDS. Autoradiographs were again made and the duplicates were compare for position of positive plaques. Twelve positive plaques found in both duplicates were selected and used for preparation of in vivo excision phagemid clones. Sub-cloning into Eucaryotic Expression Plasmid Twelve separate phagemid clones were isolated from the positive plaques by the method of in vivo excision (Hay and Short, 1992) using the ExAssist TM helper phage system (Stratagene). The pBluescript phagemid containing bacterial clones generated by the excision process were cultured in 5 mL of LB media plus ampicillin (120 pg /mL) in overnight shaking cultures at 370 C. Phagemid DNA was isolated with mini-prep columns (Qiagen) and digested with Eco R1 and Xho 1 restriction enzymes to determine insert sizes. The inserts were isolated, purified and sub cloned into the eukaryotic expression plasmid pCDNA3 (Invitrogen). This plasmid contains a CMV promoter upstream of the multiple cloning site for expression of cloned inserts in transfected eukaryotic cells. The subcloned plasmids were also screened for insert size and then prepared for sequencing with T7 and SP6 promoter primers. 46 Sequencing and Analysis The twelve clones derived from the library screening, in vivo excision and subcloning processes were sequenced in part by both manual and automated DNA sequencing methods based upon dideoxy chain termination chemistry. The Sequenase 2.0 system (US Biochemicals) was used for manual sequencing while automated sequencing was performed at the Center for Gene Research and Biotechnology (Oregon State University) with an ABI 373A automated sequence machine. After confirmation of sequence similarity to NKEF, additional primers were synthesized [ME266 = 5'GGCAGATCACCATCAACGATCTT 3' & ME267 = CCATCTGTGGCCTAAAGGCAAA] and used to sequence the full length of the cDNA by automated DNA sequencing. Analysis of Predicted Protein Sequence by in vitro Translation The CMV promoter plasmid containing the full length coding sequence for the rainbow trout gene related to human NKEF (pNCEF) was digested with Xho I. This was isolated in an agarose gel slice after electrophoresis and purified (Gene Clean, BIO 101). This was repeated again to twice purify the linear plasmid. The plasmid DNA was ethanol precipitated washed twice with 75 % ethanol and Speed Vac (SAVANT) dried with heat for 15 min. The DNA was then suspended in nuclease free water to approximately 2 lig / RL. Two micrograms served as template in a 50 !IL T7 RNA polymerase directed in vitro transcription reaction containing; 4 mM DTT, 20 units RNasin (Promega), 0.125 mM rNTPs, 10 units T7 RNA polymerase, 40 mM Tris-HCL pH 7.9, 6 mM MgC12, 2 mM spermindine and 10 mM NaCl. The reaction was incubated at 370 C for 1 hr followed by ethanol precipitation and two 75 % ethanol washes. The pellet was again vacuum dried and suspended in 5 !IL of nuclease free water. The transcription reaction product was heated to 47 650 C for 2 min. prior to addition to a 50 µL in vitro translation reaction mixture containing; 10 units RNasin, 25 pL rabbit reticulocyte lysate (Promega), 2011M amino acid mix minus methionine (Promega) and 60 ACi 35S methionine (ICN). The mixture was incubated at 300 C for 1 hr and then stored at -700 C. Aliquots were taken and added to either denaturing or non-denaturing sample buffer. Samples to be analyzed under denaturing conditions were heated to 950 C for 5 min. and cooled on ice prior to loading 15 of each to separate wells of a 15 % SDS-PAGE gel. SDS-PAGE pre-stained broad range molecular weight standards (BIO-RAD) were loaded in an adjoining reference well. The gel was run at 165 V constant for 4 hr, then dried on to a piece of blotting paper with a vacuum dryer (Hoeffer). This was exposed to autoradiograph film (HYPER-film, Kodak) for 18 hours. Western Blot Analysis The in vitro translation product was fractionated on a 15 % SDS-PAGE gel as before, also included was a concentrated sample of rabbit reticulocyte lysate mixture. The proteins were transferred to nitrocellulose blotting paper (Schleicher and Schuell) in a electrobloting chamber (BIO-RAD). The blot was blocked for 1 hr in 5 % non-fat dry milk (SACO), 1 % BSA (Fraction V, Sigma) and cut into 3 strips. The strips were placed into separate containers and incubated with one of the three anti-NKEF monoclonal antibodies diluted 1:1500 in 100 mM Tris-HC1 pH 7.2, 0.5 M NaCl, 0.05 % Tween-20 and 1% BSA 113SA) for 1 hr. The strips were washed 3 times in ITBSA and then incubated with either, anti-mouse IgG gamma chain specific or anti-mouse IgM IA chain specific, alkaline phosphatase conjugate (BIO-RAD), diluted 1:1000 in TTBSA, depending on isotype of the monoclonal. The strips were washed 3 times in TTBSA, equilibrated in 100 mM Tris pH 9.0 and developed with BCIP/NBT one component substrate (Kirkegaard & Peny Labs). 48 Transfection of Target Cell Line Transfected CHSE-214 cells served as both producers of the NCEF protein and as a target cell source. Cells were trypsinized and seeded onto 6 well tissues culture plates (Coming). The cultures were grown to 80-90 % confluence (approximately 2 x 106 cells / well) and then washed 3 times in 2 mL of Opti-MEM (Gibco BRL). The washed cells were kept at 170 C with 1 mL of Opti-MEM / well while DNA-lipid complexes were made. One i.tg of either pNCEF or pCMVBga1 with 200 .tL of OptiMem in a 12.5 mL tube (Falcon) was added to a separate tube containing 9 III, of LipofectAMINE reagent (Gibco BRL) with 200 gL of OptiMem to form the DNA-lipid complexes. The contents mixed and incubated at room temperature for 1 hour, after which 600 pL of OptiMem was added to the mixture. The media was removed from the cells and immediately overlaid with the mixture and incubated 18 hr at 170 C. The wells were washed 3 times with OptiMem, overlaid with RPMI-1640 media (Sigma) supplemented with 10 % heat inactivated fetal bovine serum (Intergen), antibiotics and L-glutamine (penicillin, 100 IU/mL; streptomycin, 100 µg/mL; and L-glutamine, 2 mM) (Gibco BRL) and returned to 170 C for 48-72 hr until needed for assays or analysis. f3-gal Activity and Immunohistochemistry Transfection efficiency of the pCMVItal transfected cells produced DNA-lipid complex incubation was determined by colorimetric enzymatic conversion of X-gal substrate by the method of Lim and Chae (1989). A sub-sample of the cell culture was plated and fixed for 10 min. with 1 % gluteraldehyde in 0.1M PBS pH 7.0. The wells were washed 3 times with PBS pH 7.0 and overlaid with substrate solution containing 0.2% X-gal, 10 mM sodium phosphate buffer (pH 7.0), 150 mM NaC1, 1 mM MgC12, 49 3.3 mM K4Fe(CN)6H20 and 3.3 mM K3Fe(CN)6 for 4 hr at 370 C. The cells were examined microscopically and blue staining cells were scored as positives. Immunohistochemical staining was used to determine the transfection efficiency of the pNCEF transfected cultures. A sub-sample of the culture was plated, fixed and rinsed in the same manner described for the Pgal transfected cultures. The wells were blocked with 5 % non-fat dry milk at 4° C overnight, rinsed, and probed with anti-human NKEF monoclonals diluted 1:100 in PBS pH 7.2 for 1 hr at 37° C. The wells were washed 5 times with PBS and incubated with avidin labeled anti-mouse (Vector). DNA Fragmentation Assay Target cell DNA fragmentation levels were determined using a modification of the method of Duke et al. (1986). Transfected CHSE-214 cell monolayers (approx. 1.0 x 106 cells) were labeled by the addition of 501.tCi methyl -3H- thymidine in 1 mL of supplemented RPMI for 24 hr at 17° C. After radiolabel incubation, the cells were washed 3 times with 2 mL RPMI, overlaid with 2 mL supplemented media and allowed to incubate for an additional 24 hr. The cell were trypsinized to a produce single cell suspension and adjusted to 1 x 105 cells / mL in supplemented media. One hundred microliters of the cell suspension (1x104 cells) was dispensed into sterile 2.0 mL conical bottom microcentrifuge tubes (ICN) and allowed to incubate for 10 hours. One hundred microliters of effector cells (head kidney or peripheral blood leukocytes) were added to quadruplicate tubes at cell concentrations of either 1, 0.5, or 0.25 x 106 cells / mL. An additional 2001..LL of media was added to each tube, after which the tubes were centrifuged for 1 second at 14,000 g to initiate cell to cell contact and incubated at 17° C for 6 hours. After the incubation period the tubes were centrifuged for 15 sec at 14,000 x g and the supernates (supemate A) were transferred to 7 mL scintillation vials (VWR). Cell pellets were then lysed by freeze thaw and the addition of 500 µL lysis buffer (10 mM Tris, 1 mM EDTA, 0.2% Triton X-100, 50 pH 7.5) to each tube. To separate fragmented DNA from intact chromatin the lysates were centrifuged for 20 min. at 14,000 x g at 4° C. Supernates (supernate B) containing the fragmented DNA were transferred to new scintillation vials. The lysed cell pellets (Pellet) were suspended in 500 µL of lysis buffer and transferred to separate scintillation vials. Radioactivity in the samples was measured by adding 5.5 mL of Cytoscint scintillation cocktail (ICN) and counting the vials containing the separate pellets and supernates in a model LS1800 (Beckman) liquid scintillation spectrometer. The percentage of DNA fragmentation was calculated using the formula [ % fragmentation = 100 x (( supernate A cpms + supernate B cpms) / ( Total supernate cpms + Pellet cpms)) J. The percentage of specific DNA fragmentation was calculated using the results of the above equation in the formula [ % specific DNA fragmentation = 100 x (( % experimental % spontaneous) / ( 100 - % spontaneous))]. 51Chromium Release Assay: Cytolytic activity on a fish target cell line was determined using a modification of the method of Moody et al. (1985). Transfected CHSE-214 cells were plated into 96 well microtiter plates (Coming) at 1 x 104 cells/ well in 100 µL media. An additional 100 µL of media containing 1 t.tCi of 51Cr (sodium chromate, ICN) was added to each well followed by a 20 hr incubation at 17° C. The wells were washed three times with 200 !IL of RPMI and leukocyte suspensions were added to triplicate wells at E:T ratios of 200:1, 100:1, 50:1 or 25:1 in 200 !IL of media. Culture medium alone was added to triplicate wells used for determination of spontaneous release. Total release was determined by adding 200 !IL of 1% Triton X-100 in PBS pH 7.2 to triplicate wells. The plates were incubated for 18 hr at 17° C in a culture chamber perfused with blood gas mixture. One hundred microliters was removed from each well and transferred to separate 6 mL Wheaton, Omni-vials (VWR). 51Cr release was determined by counting the vials for 1 min. in a model 5500 autogamma 51 counter (Beckman). The percent of specific release was calculated using the formula [ % specific release = 100 x ((experimental cpms- spontaneous cpms) / (total cpms spontaneous cpms))]. Results and Discussion Molecular Size and Antigenic Similarities of NCEF and NKEF To determine if the predicted open reading frame and deduced amino sequence for the trout derived NKEF- related clone were correct in vitro 35S methionine radio-labeling of proteins was done during the translation reaction. The reaction was fractionated through a 10 % SDS-PAGE gel and exposed to X-ray film. Figure 4.1 shows the autoradiogram and molecular weight marker indications. Two bands are apparent with corresponding molecular weights of approximately 25 and 50 k Da. This is similar to what was seen for the initial studies on human NKEF proteins isolated and purified from red blood cells (Shau et al., 1993). Under non reducing conditions the human protein appears to dimerize exhibiting an apparent molecular weight of 48 k Da, while under reducing conditions a single band at 24 k Da is seen. This may account for the two bands seen in the autoradiogram of the labeled trout protein. The faint upper band probably represents dimerized pairs not fully reduced under the conditions used. The in vitro translation proteins were again fractionated on SDS-PAGE and then transferred to nitrocellulose for western blotting analysis. Three separate blot were prepared all containing pre-stained molecular weight markers, in vitro translation reaction and control rabbit reticulate lysate concentrate. Each blot was probed with a separate monoclonal antibody preparation that is specific for either NKEF A, NKEF B or both forms. A band at approximately 25 k Da was detected in all three blots for the lanes 52 corresponding to the in vitro translation product (figure 4.2) suggesting that the trout derived protein is antigenically related to both human NKEF proteins. Analysis of twelve separate NCEF clones isolated from the trout derived cDNA library showed that the DNA sequences were nearly identical. This information suggests that there may be only one form of this protein in trout instead of two, as seen in humans. The western blot data suggest that the NCEF protein is related to both the A and B NKEF forms. The protein derived from in vitro translation of the trout NCEF gene reacts with two different monoclonals that are specific for the different human proteins. It is possible that the trout gene represents an ancestral form of the gene. It has been suggested that the two human forms arose from a primordial gene that was duplicated over the course of evolution (Shau et al., 1994). It is not known if NKEF A and B function in vivo as a strict heterodimer, two separate homodimers or a combination of both dimeric forms. However, some type or dimer is detected in portion extracts of human red blood cells by western blot (Shau et al., 1993). If dimerization is necessary to the function of these proteins it appears that the trout NCEF protein also has the capacity to form homodimers. Detection of NCEF in Transfected CHSE-214 Cell Cultures Separate cell cultures were transfected with CMV promoter driven eukaryotic expression plasmids containing either inserts coding for NCEF or beta-galactosidase. Immunohistochemistry was used to detect if the NCEF protein was being expressed in transfected cell cultures. X-gal substrate incubation was used to detect expression of beta galactosidase in the pCMVBga1 transfected cell cultures. Only the monoclonal antibody able to recognize both forms of the human NKEF proteins was able to detect the expression of NCEF in the transfected cultures. Beta galactosidase expressing cell cultures were 53 Figure 4.1 Autoradiogram of 35S-methionine labeled in vitro translation products derived from NCEF plasmid gene insert Position and size of molecular weight markers are indicated. Arrows indicate 25 k Da and 50 k Da products. Lane 1: Pelleted proteins from translation reaction. Lane 2: Supernatant proteins from translation reaction. 54 1 2 208 112 80 45 36 27 18 Figure 4.1 55 Figure 4.2 Western blots with anti-NKEF monoclonal antibodies. NCEF in vitro translation products (pelleted proteins and supernatant) and control (rabbit reticulocyte lysate) were probed with anti-human NKEF monoclonals. Molecular weight marker sizes are indicated. Panel A: Lane 1: control, Lane 2: pellet and 3: supernatant vs. anti-A NKEF. Panel B: Lane 1 supernatant, Lane 2: pellet and Lane 3: control vs. anti-B NKEF. Panel C: Lane 1 supernatant, Lane 2: pellet and Lane 3: control vs. anti-A/B NKEF. Arrow indicates the position of the 25 k Da product. Figure 4.3 Immunohistochemical analysis of CHSE-214 cells transfected with CMV­ NCEF (panel A) or CMV-rigal (panel B). Fixed cell monolayers were probed with anti-AB NKEF followed by anti-mouse alkaline phosphatase conjugate and substrate indicator. Cells expressing NCEF are indicated with arrows. 56 A 1 2 C B 3 1 2 3 1 208 112 80 45 36 27 18 7.1 Figure 4.2 A B Figure 4.3 2 3 57 negative when tested with all anti-NKEF monoclonal antibodies. The staining of NCEF indicates that the expression appears to be cytoplasmic with little surface staining (figure 4.3). Enhanced Necrotic Attack in Cultures Expressing NCEF Measured by Cell Lysis Necrosis of target cells is one result of mammalian NK or teleost NC cell mediated cellular destruction (Russell et al., 1980; Greenlee et al., 1991). Necrotic lesions produced in target cells under cytolytic attack are exhibited by membrane pore formation, cytoplasmic swelling and finally cell death by lysis (Dennert and Podack, 1983). Target cells radiolabeled with 51chromium can be used to measure the extent of cell lysis in both mammal and fish culture systems (Duke et al, 1986; Moody et al. 1985). Employing this assay system and using plasmid transfected target cells we have demonstrated that NCC activity of fish can be enhanced by NCEF present in assay culture conditions. Specifically, target cell cultures expressing NCEF were found to be lysed to a greater degree by spleen, head kidney and peripheral blood lymphocytes than control target cell cultures expressing 13gal. The effector lymphocytes were added to labeled target cell cultures in ratios of (effector:target) 200, 100, 50 and 25:1 and incubated for 20 hours. The percent specific 51chromium release was calculated (see methods) for each ratio and for the two different transfected target cell conditions. An increase of cytolytic activity followed the increase in effector to target cell ratio culture conditions. Head kidney effector cells gave the largest average increase in activity with 38 % +1- 14.7 % followed by spleen cells 21 % +1- 12.66 % and peripheral blood lymphocytes with 18.7 % +/- 11.6 %. These increases are slightly higher than the average of 13 % found by Shau's group when non purified human red blood cell cytosol extracts were used (Shau et al., 1993). 58 Figure 4.4 Results of chromium release assay with head kidney leukocytes effectors. Head kidney leukocyte effectors were incubated for 20 hours with chromium labeled CHSE-214 targets transfected with either CMVPgal (E) or CMV-NCEF (J). Results are expressed as an average percent specific release of the mean of triplicate wells for separate fish leukocyte preparations (n= 3 fish). Error bars indicate the standard deviation of the mean for the three fish. Figure 4.5 Results of chromium release assay with spleen leukocyte effectors. Effectors were incubated for 20 hours with chromium labeled CHSE-214 targets transfected with either CMV-13gal (E) or CMV-NCEF (J). Results are expressed as a percent specific release of label from targets for the mean of triplicate wells from separate fish leukocyte preparations (n=3 fish). Error bars indicate the standard deviation of the mean average specific release for the three fish. Percent Specific Realease from 1 x104 Target Cells 1 Percent Specific Release from l x104 Target Cells 60 Figure 4.6 Results of chromium release assay for peripheral blood leukocyte effectors. Cells (E=25, 50, 100 or 200 x 104 cells) were incubated for 20 hours with chromium labeled CHSE-214 targets (T=1 x 104 cells) transfected with either CMV-kal (E) or CMV-NCEF (3). Results are expressed as an average percent specific lysis of the mean of triplicate wells for separate fish leukocyte preparations (n=3 fish). Error bars indicate the standard deviation of the mean average specific lysis for the three fish. Percent Specific Release from lx104 Target Cells 62 Yet when the wide range of variation is accounted for in the fish assays the increased activity due to NCEF is near that produced in the human assays by NKEF. Therefore the cytolytic data suggests that these two closely related genes from trout and humans produced similar effects on the activity of innate killing cells. Enhancement of Apoptosis in Cell Cultures Expressing NCEF Measured by DNA Fragmentation Apoptosis is another measurable result of NK or NCC activity on target cells (Duke and Cohen, 1986; Greenlee et al., 1991). Apoptotic lesions on target cells are characterized by chromatin margination and condensation, cytoplasmic blebbing, membrane swelling and fragmentation of cellular DNA into nucleosomal subunits (Wyllie, 1980). The extent of this type of target cell destruction can be measured by the isolation and quantification of labeled fragmented DNA from assay culture (Duke et al., 1983). Transfected target cells, labeled with 3H-thymidine prior to 6 hour assay incubation with effector cells from head kidney or peripheral blood lymphocytes. Effector to target ratios of 25, 50 and 100:1 were tested with target cell cultures transfected with either CMV-NCEF or CMV-I3gal. An increase in target cell DNA fragmentation was observed in the CMV-NCEF transfected cell cultures over the CMV-13gal transfected cell cultures for both head kidney and peripheral blood lymphocyte effectors. Specifically, the head kidney effectors and the peripheral blood lymphocyte effectors showed respective average increases of 9.4 % +/- 1.4 % and 8.5 % +/- 1.9 % specific DNA fragmentation of NCEF targets over Pgal targets. Although this type of cellular destruction activity has not been tested in the human system in respect to NKEF effect on NK cells, it appears that cell killing mechanism of apoptosis is enhanced by NCEF in fish NC cells. 63 Figure 4.7 Results of DNA fragmentation assay for peripheral blood leukocyte effectors. Cells (E=25, 50, 100 x 104 cells) were incubated for 6 hours with 3H-thymidine labeled CHSE-214 targets (T=1 x 104 cells) transfected with either CMV-Pgal (E) or CMV-NCEF (J). Results are expressed as an average percent of the mean of quadruplicate wells for separate fish leukocyte preparations (n=6 fish). Error bars indicate the standard deviation of the mean average specific lysis for the six fish. Figure 4.8 Results of DNA fragmentation assay for head kidney leukocyte effectors. Cells (E=25, 50, 100 x 104 cells) were incubated for 6 hours with 3H-thymidine labeled CHSE-214 targets (T=1 x 104 cells) transfected with either CMV-Pgal (E) or CMV-NCEF (J). Results are expressed as an average percent of the mean of quadruplicate wells for separate fish leukocyte preparations (n=6 fish). Error bars indicate the standard deviation of the mean average specific lysis for the six fish. Percent Specific Fragmentation of Target Cell DNA Percent Specific Fragmentation of Target Cell DNA Z 65 Acknowledgments This study was supported by the United States Department of Agriculture to the Western Regional Aquaculture Consortium under the grant 92-38500-7195 project no. 92080441; an Oregon Sea Grant with funds from the National Oceanic and Atmospheric Administration, Office of Sea Grant, Department of Commerce, under grant NA89AA-D­ SG108, project R/FSD-16; grant NA36RG451, projects R/FSD-23 and Amend. No. 2; a grant from the National Institutes of Allergy and Infectious Disease, T32A107379; and a grant from the National Oceanic and Atmospheric Administration (Salton-Kennedy funds), NA46FD0490. Monoclonal antibodies were provided as a kind gift from Dr. Hungyia Shau at UCLA medical school, Department of Surgery and Dr. Charles Shi, Pharmacia labs. References Carlson, R. L., Evans, D. L., and Graves, S. S. (1985). Nonspecific cytotoxic cell in fish (Ictalurus punctatus). V. Metabolic requirements of lysis. Dev. Comp. Immunol., 9: 271-280. Dennert, G. and Podack, E. R. (1983). Assembly of tubular complexes on target cell membranes. J. Immunol ., 157: 1483-1495. Duke, R. C. and Cohen J. J. (1986). Differences in target cell DNA fragmentation induced by mouse cytotoxic T lymphocytes and nonspecific killer cells. J. Immunol., 137: 1442-1447. Duke, R.C., Chervenak, R. and Cohen J. J. (1983). Endogenous endonuclease-induced DNA fragmentation. An early event in cell mediated cytolysis. Proc. Natl. Acad. Sci. USA., 80: 6361-6356. Evans, D. L., Graves, S., Cobb, D., and Dawe, D. L. (1984). Nonspecific cytotoxic cells in fish ( Ictalurus punctatus), H. Parameters of target cell lysis and specificity. Dev. Comp. Immunol., 8: 303-312. 66 Evans, D. L., Harris, D. T., and Jaso-Freidmann, L. (1992) Function associated molecules on nonspecific cytotoxic cells: Role in calcium signaling, redirected lysis, and modulation of cytotoxicity. Dev. Comp. Immunol., 16: 383-394. Graves, S. S., Evans D. L., and Dawe D. L. (1985). Mobilization and activation of nonspecific cytotoxic cells in the channel catfish infected with Ichthyopthirius multifiliis. Dev. Comp. Immunol., 8: 43-51. Greenlee, A. R., Brown, R. A., and Ristow, S. S. (1991). Nonspecific cytotoxic cells of rainbow trout (Oncorhynchus mykiss) kill YAC-1 target cells by both necrotic and apoptotic mechanisms. Dev. Comp. Immunol., 15: 153-164. Hayden, B. J., and Laux, D. C. (1985). Cell-mediated lysis of murine target cells by nonimmune salmonid lymphoid preparations. Dev. Comp. Immunol., 9: 627­ 639. Herberman, R. B., Nunn, M. E., Holden, H. T., Staal, S., and Djeu, J. Y. (1977). Augmentation of natural cytotoxic reactivity of mouse lymphoid cells against syngeneic and allogeneic target cells. Int. J. Cancer , 19: 555-562. Himuma, S., Abo, T., Kumagai, K., and Hata, M. (1980). The potent activity of fresh water fish kidney cells in cell killing. I. Characterization and species -distribution of cytotoxicity. Dev. Comp. Immunol., 4: 653. LeMorvan-Rocher, C., Troutland, D., and Deschaux, P. (1995). Effects of temperature on carp leukocyte mitogen- induced proliferation and nonspecific cytotoxic activity. Dev. Comp. Immunol., 19: 87-95. Lester III, J. P., Evans, D. L., Leary III, J. H., Fowler, S. C., Jaso-Friedmann, L. (1994). Identification of a target cell antigen recognized by nonspecific cytotoxic cells using a anti-idiotype monoclonal antibody. Dev. Comp. Immunol., 18: 219­ 229. McKinney, E. C., and Schmale, M. C. (1994). Damselfish with neurofibromatosis exhibit cytotoxicity towards targets. Dev. Comp. lmmunol., 18: 305-313. Moody, C. E., Serreze, D. V., and Reno P. W. (1985) Nonspecific cytotoxicity activity of teleost leukocytes. Dev. Comp. Immunol., 9: 51-64. Mourich, D. V., Hansen, J., and Leong, J. C. (1995). Natural killer cell enhancement factor-like gene in rainbow trout (Oncorhynchus mykiss). Immunogenetics, 42: 438-439. Ritz, J., Schmidt, R.E., Michon, J., Hercend, T., and Schlossman, S. F. (1988). Characterization of functional surface structures on human natural killer cells. Adv. Immunol., 42: 181-211. Russell, J. H., Masakowski. V. R., and Dobos, C. B. (1980). Mechanisms of immune lysis. I. Physiological distinctions between target cell death mediated by cytotoxic T lymphocytes and antibody plus complement. J. Immunol., 124: 1100-105. Shau, H., and Golub, S. H. Modulation of natural killer-mediated lysis by red blood cells. (1988). Cell. Immunol., 116: 60-72. 67 Shau, H., Butterfeild, L. H., Chiu, R., and Kim, A. (1994) Cloning and sequence analysis of candidate human natural killer-enhancing factor genes. Immunogenetics., 40: 129-134. Shau, H., Gupta, R. K., and Golub, S. H. (1993). Identification of a natural killer enhancement factor (NKEF) from human erythroid cells. Cell. Immunol., 147: 1-11. Trinchieri, G. (1989). Biology of natural killer cells. Adv. Immunol., 47: 182-376. Wolfe, S.A. Tracey, D.E., and Henney, C. S. (1977). Induction of natural killer cells by BCG. Nature, 262: 584-587. Wylie, A. H. (1980). Glucocorticoid-induced thymocyte apoptosis with endogenous endonuclease activation. Nature, 284: 555-556. Yannelli, J. R., Thurman, G.B., Mrowca-Bastin, A., Pennington, C. S., West, W. H., and Oldman R.K. (1988). Enhancement of human lymphokine- activated killer cell cytolysis and a method for increasing lymphokine-activated killer cell yields to cancer patients. Cancer Res., 48: 5696-5700. 68 CHAPTER 5 CLONING AND SEQUENCE OF A STAT5-LIKE GENE IN RAINBOW TROUT (Oncorhynchus mykiss): DISTRIBUTIONAL EXPRESSION IN LYMPHOID CELLS. Dan V. Mourich, Marc C. Johnson, Carol Kim and Jo Ann Leong* Department of Microbiology and the Center for Salmon Disease Research Oregon State University, Corvallis, Oregon 97331, U.S.A. *Correspondence should be addressed to this author (for submission to Immunogenetics) This Paper reports a portion of the work encompassed by a thesis submitted to Oregon State University, Department of Microbiology, in partial fulfillment of that required for the degree of Ph. D., for Dan V. Mourich 69 Abstract We report here a 960 nucleotide rainbow trout gene sequence derived from two separate polymerase chain reactions (PCR) with primers designed to conserved regions of the STAT5 gene found in sheep, humans and mice. Rainbow trout (Oncorhynchus mykiss) cDNA from peripheral blood lymphocytes served as template. The consensus sequence from the two PCR products shares 79.6 % over all nucleotide identity and 81.4 % apparent amino acid homology with the STAT5 sequence from human, mouse and sheep. Also, the presence of a STAT5-like protein was detected with a monoclonal antibody specific for STAT5 in various rainbow trout tissues, corresponding to a similar tissue distribution found in humans. This was confirmed in both western blot and immunohistochemical analysis. Cell lines from chinook salmon, rainbow trout and carp were also positive for STAT5 by western blot. Lastly, we demonstrated that mitogenic stimulation of trout lymphocytes with Con A results in the rapid translocation of a STAT5 like protein to the nucleus where it binds to a DNA sequence containing the GAS motif. Introduction Cytoldnes are soluble secreted proteins that regulate and coordinate communication between cells of the immune and hematopoietic systems (Kishimoto et al., 1994). This cell to cell communication is mediated through surface bound receptors specific for each cytokine (Hamblin, 1993). The binding of a cytokine to its cognate receptor results in receptor dimerization and the subsequent triggering of intercellular signals (Heldin, 1995). The resulting effect is the rapid transcriptional activation of target genes which may control production of soluble proteins such as antibodies or cytokines or the growth and differentiation of a responding cell (Sabath et al., 1990). It is the processes between 70 receptor binding and gene activation that have recently become a focus of study in immune regulation. It has long been known that phosphorylation states of proteins are involved, however, early on the identification and characterization of the responsible kinases and substrates remained unknown (Hatakeyama et al., 1991). Since intracellular domains of cytokine receptors lack intrinsic kinase activity, other receptor associated protein kinases must be recruited to transmit secondary signaling processes (Torigoe et al., 1992; Venkitaraman and Cowling, 1992; Kishimoto et al., 1994). The kinases now known to associate with cytokine receptors and function in these pathways belong to the Janus kinase (Jak) family (Russell et al., 1994). Receptor activated Jak proteins in turn catalyze the phosphorylation of a class of transcriptional factors termed signal transducers and activators of transcription (STAT) proteins. Phosphorylation of STAT proteins results in their dimerization and nuclear translocation. Once in the nucleus STATs alone or in association with other transcriptional factors bind to response element sequences for transcriptional activation of target genes (Darnell et al., 1994). To date six different STAT proteins (STAT 1-6) have been characterized and identified to be involved in the signal transduction of several cytokines including INF a, INF 13, IL-2, IL-4, IL -6, IL-7. IL-10, IL-12, IL-13, IL -15 ( as reviewed by Ivashkiv, 1995) and growth factors EGF and prolactin (Ruff -Jamison et al., 1995; Gilmor and Reich, 1994). Although there is evidence that cytokine -like factors exist in phylogenetically primitive animals including fishes, most of this remains as characterizations of biologically active culture supernatant proteins (as reviewed by Secombes, 1994). To date only two fish derived genes resembling cytokines have been cloned (Tamai et al., 1992 and 1993). Yet, little is known about signal transduction of cytokines and cytokine -like factors in teleost fishes. Here we report on a partial gene sequence derived from rainbow trout (Oncorhynchus mykiss) that closely resembles the signal transduction and transcriptional factor STAT5 found in various mammals. The cell type distribution of the STAT5-like protein was examined by western blot and confocal immunohistochemical analysis. Also 71 conditions for the activation, nuclear translocation and DNA element binding were examined. STAT5 is involved in the signal transduction processes of interleukins 2, 7 and 15 (Lin et al., 1995). Cell expressing the corresponding receptors will respond to these cytokines by Jak driven phosphorylation of Src homologous-2 (SH2) domains in STAT5 proteins (Frank et al., 1995). Trans location to the nucleus and binding to promoter sequences containing the consensus inverted repeat G/TAA of structure called the y-INF­ activation site (GAS) results in the rapid transcriptional induction of some genes (Gilmor and Reich, 1994). Interleukin -2 as well as mitogenic stimulation have been shown to rapidly induce nuclear binding activity of STAT5 in freshly isolated PBLs. This binding activity appears to be transient since it drops off dramatically only hours after stimulation (Hou et al., 1995). The tissue distribution of STAT5 expression has also been determined (Lin et al., 1995). Northern blot analysis demonstrates active transcription of STAT5 gene in heart, placenta, lung, muscle, spleen, thymus , prostate, testis, ovary, intestine, colon and peripheral blood lymphocytes. While in the brain, liver, kidney and pancreas transcription is dramatically reduced or undetectable. We report here a partial gene sequence derived from a series of polymerase chain reactions (PCR) with primers designed to conserved regions of published STAT5 genes and rainbow trout cDNA as template. Also, the presence of a STAT5-like protein is detected in various cell types and cell lines from fish with a monoclonal specific for STAT5. Lastly, we show that mitogenic stimulation of trout lymphocytes with Con A results in the rapid translocation of a STAT5 like protein to the nucleus which binds to a DNA sequence containing the GAS motif. 72 Materials and Methods Animals and Tissues Rainbow trout (Oncorhynchus mykiss ), Shasta strain, were obtained from the Food Toxicology Research Center at Oregon State University and maintained at the Center for Salmon Disease Research Laboratory in Corvallis, Oregon. The facility supplies pathogen-free water at a constant temperature of 120 C. Fish were fed Oregon Moist Pellet (OMP) commercial salmon food daily. Blood and tissues (anterior kidney, liver and spleen) were obtained by aseptic sampling or dissection after lethal overdose anesthesia in benzocaine [(ethyl p-amino-benzoate: Sigma) (Kaattari and Irwin, 1985)]. The fish derived cell lines CHSE-214, EPC and RTG-2 were maintained in RPMI-1640 media (Sigma) supplemented with 10 % heat inactivated fetal bovine serum (Intergen), antibiotics and L-glutamine (penicillin, 100 IU/mL; streptomycin, 100 ug/mL; and L-glutamine, 2 mM) (Gibco BRL). The cells were maintained and cellular assays were done at 17° C in an incubator culture chamber (C.B.S. Scientific) perfused with a blood gas mixture composed of 9.9% mol/mol CO2, 10.2% mol/mol 02 and 79.95 mol/mol N2. Isolation of Rainbow Trout STAT5 Gene Segments Synthetic primer were made to conserved regions found in the published STAT5 gene sequences of human, sheep and mouse. All primers were synthesized at the Oregon State Center for Gene Research and Biotechnology Central Services facility. These primers were then used in the polymerase chain reaction (PCR) to amplify a product from a cDNA pool derived from trout peripheral blood cells. Using the RNAsol method (Tel-Test, INC.) total RNA was isolated from a cell pack taken from 1 mL of trout peripheral blood. To 73 produce a cDNA pool, a reverse transcription reaction was carried out on 2 ug of the isolated RNA in a 20 gL mixture containing ; .5 pig dT17-adapter primer [ ME102 = 5' GACTCGAGTCGACATCGA(T)17 3' ], 300 units Moloney Murine Leukemia Virus Reverse Transcriptase (MMLV RT), 10 units RNasin, 0.02 mM dNTPs and 1 X MMLV RT buffer ( Promega). The reaction mixture was incubated at 37° C for 1 hour followed by 950 C for 5 minutes. The polymerase chain reaction was carried out in a 100 µL reaction mixture containing; 11.th of the cDNA reaction mixture was diluted 1:1000 in nuclease free water, 0.2 mM dNTPs, 51.IM primers, 1.5 mM MgC12, 50 mM KC1, 10 mM Tris-HC1 (pH 9.0), 0.1 % Triton X-100 and 1 unit Taq polymerase (Promega). The mixture was overlaid with mineral oil and placed into a Thermolyne thermocycler (Barstead) for amplification. The reaction was heated to 950 C for 2 minutes after which 5 cycles of a low stringency initiation profile of [95° C for 1 min., 450 C for 1 min. and 72° C for 1 mini, followed by 30 cycles of a high stringency amplification profile of [95° C for 1 min., 58° C for 1 min. and 72° C for 1 mini were run. This was immediately followed by an over-hang extension incubation of 720 C for 10 minutes. Ten FAL of the reaction was analyzed on an ethidium bromide stained agarose gel. PCR products of the predicted size were excised and either directly sequenced or ligated into the TA cloning vector and subsequently transformed into E. coli according to manufacture's protocols (Invitrogen). Plasmid clones were isolated and screened for insert size by restriction enzyme digest analysis with EcoR I. Clones containing inserts of predicted size were then prepared for 17 and SP6 primer sequencing to confirm sequence homology to STAT5 gene sequences. Refer to Table 5.1 for primer sequences and map position along human STAT5 gene. Sequencing The Sequenase 2.0 system (US Biochemicals) was used for manual sequencing, following manufacture's suggested protocol.. Automated sequencing was performed at the 74 Center for Gene Research and Biotechnology (Oregon State University) with an ABI 373A automated sequencing machine. Primer Name Sequence 5'-3' Position ME 318 gacgacgagctgatccagtg 750-769 ME 319 aacaactgctgcgtgatgg 1195-1215 ME 320 cccgtcgaaccactgcca 1716-1736 ME 326 gcacctccgccttgtacttc 1542-1562 HUMAN STAT 5 LIANA 2400 bases ME 318 41 llob ME 319 Table 5.1 ME 326 ME 320 PCR primer pairs and gene segments positions along the human STAT5 gene. Isolation of Cells Leukocytes were isolated from peripheral blood, spleen and anterior kidney. Separate single cell suspensions of spleen, liver or anterior kidney were prepared by mincing the tissues in a petri dish containing 10 mL RPMI-1640 and subsequently passed through a 100-mesh tissue sieve. Cells were centrifuged and washed twice in 20 mL of media and finally suspended in 12 mL of unsupplemented RPMI-1640. Whole blood collected in a heparinized vacuum tubes was centrifuged. After removal plasma, the packed blood cells were washed twice with media and suspended to a final volume of 12 mL in 75 RPMI-1640. All cell suspensions except the hepatocytes were underlayed with an equivalent amount of Histopaque-ficol 1077 (Sigma). After centrifugation, the white cells contained at the interface were removed and washed twice with supplemented media. Viability and number were determined by trypan blue exclusion for all of the cell preparations.. Cell number was adjusted to 1 x 106 cells per mL in complete media and plated into 6 well culture plates (Corning) at 1 mL per well. Western Blot Analysis Samples were taken from cell culture, tissues or lymphocyte preparations and adjusted to 1 x 10 6 total cells in 100 !IL Phosphate buffered saline (PBS). An equal volume of 2 X SDS-PAGE sample buffer was added to each sample which was then placed in a boiling water bath for 5 minutes. The samples were fractionated on a 12 % SDS­ PAGE gel and then transferred to nitrocellulose paper (Schleicher and Schuell) in a electrobloting chamber. The blot paper then was blocked for 1 hr in 5 % non-fat dry milk (SACO), 1 % BSA (Fraction V, Sigma) after which it was transferred to a dish containing anti -STATS monoclonal antibody (Transduction Labs, Lexington, Kentucky) diluted 1: 250 in PBS and incubated for 2 hours at room temperature. This was followed by three separate 10 minute shaking wash steps in PBS containing 0.05 % Tween-20 and 1% BSA. An anti-mouse IgG specific biotinylated secondary antibody (BIO-RAD), diluted 1:1000 in PBS, was added for 2 hours at room temperature. The blot was again washed 3 times as before. At this time an avidin-HRP conjugate diluted 1:500 in PBS (Sigma) was added for a 1 hour incubation. Five washes followed in PBS containing 0.05 % Tween-20 and two in PBS alone. The blot was then removed to a dish containing pre-mixed Cl -HRP SuperSignal luminol enhancer solution (Pierce) for 20 min. The excess liquid was drained off and the blot placed between two plastic cover sheets. This was exposed to hyper film X-ray film (Kodak) for 10 minutes. The film was immediately developed and dried. 76 Nuclear Protein Extraction Nuclear proteins were obtained from the peripheral blood lymphocyte cultures after a 1 hour pulse with 5 ng per mL concanavalin A (Con A) (Sigma) by the method of Schreiber et al. (1989). Pulsed cells, approximately 1 x 106 cells per preparation, were harvested and washed with 10 mL of ice cold Tris buffered saline (TBS) by pelleting at 1500 x g for 5 min. in a 40 C centrifuge. The pellet was suspended in 1 mL of cold TBS and transferred to a 1.5 mL eppendorf tube and pelleted again at 1000 x g for 15 sec in a microfuge. The TBS was removed and the cell pellet suspended in 400 µL of ice cold buffer A (10 mM Hepes pH 7.9, 10 mM KCL, 0.1 mM EDTA, 0.1 mM EGTA, 1 mM DTI' and 0.5 mM PMSF) by gentle pipetting. The tube containing the suspended cells was placed on ice for 15 min., after which 25 [IL of a 10 % solution of NP-40 was added. The tube was vortexed for 10 sec and then immediately centrifuged for 30 sec at 2000 x g. The supernatant was removed and the remaining nuclear pellet was suspended in 501.1L of ice cold buffer C (20 mM Hepes pH 7.9, 0.4 mM NaC1, 1 mM EDTA, 1 mM EGTA, 1 mM DTT and 1 mM PMSF). The tube was shaken vigorously for 15 min. at 40 C on a shaking platform. After a 5 min. 40 C centrifugation at 5000 x g the supernatant containing the nuclear extract was removed to a new tube and kept frozen at 700 C. Electromobility Shift and Super Shift Assay Two !IL of nuclear extract material containing approximately 4 i.tg of total protein was used in the binding and super shift assays. The super shift assay involved a pre incubation step of 1 hr with 21AL (0.25 mg per mL) of the anti -STATS monoclonal antibody with nuclear extract at room temperature. The nuclear extract alone or pre incubated with the anti-STAT5 monoclonal were added to the binding reaction mixture 77 for 1 hr at room temperature. The reaction mixture consisted of 5 mM Tris-HC1 pH 7.5, 25 mM NaC1, 0.5 mM EDTA, 2.5 % glycerol, 0.5 mM DTT, 3 lig Poly I:C and 2 picomoles of double stranded y 32P end labeled primer containing the GAS motif (5' GCCTGATTTCCCCGAAATGATGA 3') in a total volume of 30 p.L. After incubation, 51AL of loading buffer (reaction buffer with a trace of bromophenol blue dye and 5 % glycerol) was added and the samples loaded into individual wells of a 5 % acrylamide (30:1 acrylamide:bisacrylamide) 0.5 M Tris-Borate EDTA (TBE) gel. The sample were electrophoresed for 1.5 hr. at 100 volts. The gel was dried and exposed to hyper film Xray film (Kodak) for 72 hours. The film was developed in an Xomat (Kodak) automatic film developer. Immunohistochemical Confocal Microscopic Analysis of STAT5 in Trout Cells Spleen, peripheral blood and head kidney lymphocytes isolated by ficol gradient centrifugation as well as mixed population of trout hepatocytes were used in this analysis. The cells were washed twice with PBS by lightly spinning the cells to the bottom of the microfuge tube at low rpm. Cells were fixed by suspending the cell pellet in 1 mL of 3.7% formaldehyde (Fluka) in PBS. To permeabilize, the cells were incubated with 0.5% Triton-X 100 in PBS for 5 minutes at room temperature. The cells were washed and then allowed to adhere to Poly L-lysine coated cover slips for 20 minutes. After the allotted time, the cover slips were washed in PBS to clear away any non-adherent cells. A solution of 1% BSA with 0.1% Tween-20 in PBS was used as a blocking agent and incubated with the cells for 30 minutes at room temperature. At this point, the blocking solution was used as the diluent for the primary and secondary antibody preparations. The samples were incubated with a 1:100 dilution of mouse anti-STAT-5 for one hour. The cells were washed and subsequently incubated with goat anti-mouse IgG conjugated with Texas Red (10 1.1g/mL, Molecular Probes, Inc.) for one hour. After washing the samples, fluorescein 78 conjugated Concanavalin A (10 ug/mL, Molecular Probes, Inc.) and Hoescht dye was to added to a total concentration of 10011M and allowed to incubate for 5 minutes. The cells were washed, allowed to air dry, and then mounded in Cytoseal (Stephens Scientific). The samples were then analyzed with a Leica TCD4 Confocal Microscope using a 100 X oil immersion lens (NA 1.3). Results and Discussion Sequence Comparison: The combined data from the isolated gene sequences obtained from rainbow trout (Oncorhynchus mykiss) show a high degree of identity to known STAT5 gene sequences . When this 906 nucleotide sequence (figures 5.1 a, b and c) was compared to published sequences from human (GenBank accession # L4114, Hou et al., 1995), sheep (GenBank accession # X78428, Wakao et al., 1994) and mouse STAT5a and STAT5b clones (GenBank accession #'s U21103, U21110, Liu et al., 1995; 248538, 248539, Mui et al., 1995) shared identities of 79.5 %, 77.6 % , 80.3 % and 81.2 % respectively, were observed. The predicted amino acid sequence for the trout gene segment (figure 5.2) shares 81.1 %, 79.3 %, 82% and 83 % identity with human, sheep, mouse STAT5 A and mouse STAT5 B, respectively. The significant level of conservation of the STAT5 genes seen throughout these different species, suggest that the function of STAT5 may be the same in trout. Specifically, STAT5's function in mammals is the transduction of cytokine signals in response to IL-2, 7 and 15. Although, these cytokines have yet to be fully characterized in fish, the trout STAT5 gene sequence data implies that one of the necessary components for their signal transduction is present in fish. 79 Figure 5.1a Sequence of STAT5-like gene segment (nucleotides 1 to 420) from rainbow trout (0. mykiss). Alignment with other published STAT5 cDNA sequences. A consensus of the cloned sequences for trout is shown. (.) indicates identical nucleotides to the human STAT5A reference sequence. (-) indicates gaps. 80 HUMSTAT5A OAMGF MMU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF AGCGGCGGCA GCAGCTGGCC GGGAACGGCG GGCCCCCCGA GGGCAGCCTG GACGTGCTAC G CG.T A CG A..AGC-... ..T ....... AA G T G AA G T G AA G T G AA G T G ..A.A..A.. T ................. A. .T..T..A.. ...GG.G... ...A.C..G.60 AGTCCTGGTG TGAGAAGTTG GCCGAGATCA TCTGGCAGAA CCGGCAGCAG ATCCGCAGGG G A MMU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT A AG A 120 A CG. HUMSTAT5A CTGAGCACCT CTGCCAGCAG CTGCCCATCC CCGGCCCAGT GGAGGAGATG CTGGCCGAGG OAMGF MMU21103 .0 MMT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MMU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MMU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MMU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MMU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT .A..A c G A C T G A C G G A A C GA.A A T C CA. C T T T C A T T AA .CC180 TCAACGCCAC CATCACGGAC ATTATCTCAG CCCTGGTGAC CAGCACATTC ATCATTGAGA C C C T C G C C C G C C T C G C C C G C AGT A C A C C T ..... A.. 240 AGCAGCCTCC TCAGGTCCTG AAGACCCAGA CCAAGTTDGC AGCCACCGTA CGCCTGCTGG C C G G G G G G G G T G C G T T C A TG ..T..C..A.300 TGGGCGGGAA GCTGAACGTG CACAaAATC CCCCCCAGGT GAAGGCCACC ATCATCAGTG C G C ....G..A.. ...... T... ........ C. ....G ........... G... ........ C. G T C G G C ....G..A.. ...... T... ........ C. ....G ........... G... ........ C. G T C G G C ....T ..... ...C..T... ........ C. ....G ..... C....G.... ........ T.360 AGCAGCAGGC CAAGTCTCTG ................ C... ................ C... ................ C... ................ C... ................ C... .A...G.... G...G.CT.. CTIAAAAATG ..C..G..C. ..C..G.... ..C..G.... ..C..G.... ..C..G.... T.C..G..T. Figure 5.1a AGAACACCCG CAACGAGTGC .......... ...T ...... .......... ...T ...... .......... ...T..T.A. .......... ...T ...... .......... ...T..T.A. ........ A. G..T..CA.. AGTGGTGAGA ..C..G.... ..C..C.... ..C..C.... ..C..C.... ..C..C.... ..G..G....420 81 Figure 5.1b Sequence of STAT5-like gene segment (nucleotides 421 to 840) from rainbow trout (0. mykiss). Alignment with other published STAT5 cDNA sequences. A consensus of the cloned sequences for trout is shown. (.) indicates identical nucleotides to the human STAT5A reference sequence. (-) indicates gaps. 82 HUMSTAT5A OAMGF MMU21103 b4W21110 MMSTAT5A MMSTAT5B TROUT TCCTGAACAA CTGCTGCGTG ATGGAGTACC ACCAAGCCAC GGGCACCCTC AGTGCCCACT T GCG A C T C T G G C T C G T A C T C G T G C T C G T G C ...CT AA T. G . A A G ..T..T....480 OAMGF.......... HUMSTAT5A NINIU21103 NINTT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MNIU21103 NINIT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF A4NDU21103 MMT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF NENAU21103 MNIT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MNIU21103 MNIT21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MNIU21103 Mh4T21110 MMSTAT5A MMSTAT5B TROUT TCAGGAACAT GTCACPGAAG AGGATCAAGC GTGCTGACCG GCGGGGTGCA GAGTCCGTGA ...C..C... .......... .A ........ ...A..C... ..... T.... A A A A C. C. A . ....A ..... ...0 ..... A C.A C. C. A . ....A ..... ...0 ..... A C.A C C .A. ...T ........... G.... A .GT A .AT T .GT.G C..T..G... .G...A..A. A ...T ........... G.... C T A A T. C. G. . G. C.540 CAGAGGAGAA GTTCACAGTC CTGTITGAGT CTCAGTTCAG TGTTGGCAGC AATGAGCTTG A G A .G C C G .G A GA C A C. C. .TG .A .0 . G. G C C G .G A GA C A C. C. .TG .A .0 . G. T T A T .T C. G. .GG.. . .0 . G.600 TGTTCCAGGT GAAGACTCTG TCCCTACCTG TGGTTGTCAT CGTCCACGGC AGCCAGGACC C T C T C C C T T .C..T..A.. C CT.. G..0 .G .G .G T T A C C C T T .C..T .A C CT.. .G .0 .G .G .G T T A .0 C C AT.A ..T.NT..C. .C..G..G.. A..T ..... T ..T..A...A660 ACAATGCCAC GGCTACTGTG CTGTGGGACA ATGCCTTTGC TGAGCCGGGC AGGGTGCCAT G T T C C C C C A T T T C C C A T ....0 ...A..G.TC .T T T T A 720 T CC AC AC CC 7TGCCGTGCC TGACAAAGTG CTGTGGCCGC AGCTGTGTGA GGCGCTCAAC ATGAAATTCA C G C T G A G A T G A G A .C.T. .T T G C T A. .C. .AG 780 AGGCCGAAGT GCAGAGCAAC CGGGGCCTGA CCAAGGAGAA CCTCGTGTTC CTGGCGCAGA G GT. .T .T ..... A T A A A T . T A A T A .T ..... A T A ....A..GA. ...AG.TGC TT TTG.TCGC.. ...G..C... ..... C....840 .T ..... Figure 5.1b 83 Figure 5.1c Sequence of STAT5-like gene segment (nucleotides 900 to 960) from rainbow trout (0. mykiss). Alignment with other published STAT5 cDNA sequences. A consensus of the cloned sequences for trout is shown. (.) indicates identical nucleotides to the human STAT5A reference sequence. (-) indicates gaps. 84 HUMSTAT5A OAMGF NINVU21103 h4t2T21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF h4W21103 hOTT21110 MMSTAT5A WASTAMB TROUT AACTGTICAA CAACAGCAGC AGCCACCTGG AGGACTACAG .G C A T A C A T A C A T A C A T A C A .GGCA....G ..G.GC.... .T.A...CA. .A . C TGGCCTGTCC GTGTCCTGGT900 C A . . T CA A. .T CA A CA A. .T CA A CA A. A. A G CCCAGTTCAA CAGGGAGAAC TI'GCCGGGCT GGAACTACAC CTTCTGGCAG TGGTTTGACGG960 C C C C C C T A AC ....T..... T T C C C C T A AC ....T..... T T A C G A GA T T A CA Figure 5.1c 85 Figure 5.2 Predicted amino acid sequence of trout (Oncorhynchus mykiss) STAT5­ Ike protein and its relationship related to other STAT5 proteins from human, sheep and mouse. (.) indicate identity to the human protein sequence. (-) indicates deletions. 86 HUMSTAT5A OAMGF QWKRRQQLAG NGGPPEGSLD VLQSWCEKLA EIIWQNRQQI RRAERLCWL PIPGPVEEML HDWR MEA R­ h4M21103 MMU21110 MMSTAT5A MMSTAT5B TROUT A-Q .H HUMSTAT5A OAMGF AEVNATITDI ISALVTSTFI IEKQPPQVLK TQTKFAATVR LLVGGKLNVH MNPPQVKATI .......G.. I T R I L MMU21103 MMU21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF NDL.S V ISEQQAKSLL KNENTRNECS GEILNNCCVM EYHQATGTLS AHFRNMSLKR IKRADRRGAE MMU21103 MMU21110 DY. MMSTAT5A MMSTAT5B S G DY. TROUT ....E..A.F HUMSTAT5A OAMGF SVTEEKFTVL FESQFSVGSN ELVFQVKTLS LPVVVIVHGS QDHNATATVL WDNAFAEPGR MMU21103 MMU21110 MMSTAT5A MMSTAT5B TROUT HUMSTAT5A OAMGF MMU21103 MMU21110 DSR N P D I D I M G H HUMSTAT5A OAMGF X VPFAVPDKVL WPQLCEALNM KFKAEVQSNR GLTKENLVFL AQKLFNNSSS HLEDYSGLSV L N M I I MMSTAT5A MMSTAT5B TROUT WS I ...v .............. I N N N N D. .Y...M.GA. ..FDR ..... ...A.SSA.I NP SWSQFNRENL PGWNYTFWQW FDG* MMU21103 MMU21110 R MMSTAT5A MMSTAT5B TROUT ..A.L...S. ..R.F....F NGS. R Figure 5.2 NSM.. NSM.. NSM.. NSM RSMTM 87 Antigenic Analysis and Tissue Distribution of STAT5 in Rainbow Trout To determine if STAT5-like proteins were present in cells of fish, western blot analysis was used. A monoclonal antibody specific for STAT5 (Transduction labs), shown to cross react with STAT5 proteins from human, mouse and sheep, was used to probe cell extracts from cell lines from chinook salmon (CHSE-214), rainbow trout (RTG­ 2) and carp (EPC). Cell samples were boiled in SDS-PAGE sample buffer and fractionated on a 10 % SDS-PAGE gel and transferred to nitrocellulose paper. A control sample of mouse cell extract supplied by the manufacture was included as a positive control for STAT5. Figure 5.3 shows a common protein band at approximately 91 k Da detected by the STAT5 monoclonal antibody for all cell lines tested. This result, together with the sequence information for rainbow STAT5-like gene confirms that a protein related to mammalian STAT5 is present in fish cells. The distribution of STAT5 in mammalian cells has been demonstrated by northern blot analysis (Lin et al., 1995). The constitutive expression of STAT5 mRNA is seen in heart, placenta, lung, muscle, spleen, thymus , testis, ovary, intestine, colon and peripheral blood lymphocytes. Transcription levels are much lower in the brain, liver, kidney and pancreas and in most cases beyond the level detection for northern blot analysis. A similar tissue expression profile was seen in rainbow trout by western blot analysis. Figure 5.4 shows the STAT5 monoclonal reacting with a 91 k Da protein in cell samples taken from rainbow trout. Specifically, a high level of protein is seen in both peripheral blood and spleen derived lymphocytes. STAT5 protein was also detected in head kidney leukocyte samples, but at considerably lowered levels when compared to peripheral and spleen lymphocytes. No STAT5 protein was detected in sample preparations from liver or red blood cells. 88 Figure 5.3 Detection of STAT5 proteins in fish cell lines. Western blot results of cell proteins probed with a STAT5 specific monoclonal antibody. Lane 1: positive control mouse RSV-3T3 fibroblastic cell line sample supplied by manufacture. Lane 2: CHSE-214 cells. Lane 3: EPC cells. Lane 4: RTG-2 cells. Molecular weight marker positions and sizes are indicated. 89 1 2 3 Figure 5.3 4 90 Figure 5.4 Distribution of STAT5 protein in trout tissues. Western blot analysis of proteins derived from various cell types from rainbow trout probed with STAT5 specific monoclonal antibody. Molecular weight marker positions are indicated. Lane 1 Pre-stained molecular weight markers. Lane 2: Peripheral blood lymphocytes. Lane 3: Liver cells. Lane 4: Head kidney lymphocytes. Lane 5: Spleen derived lymphocytes. Lane 6: Red blood cells. 91 2 1 3 a 204 121 84 50 Figure 5.4 4 5 6 92 The distribution of STAT5 expression was also examined by immunohistochemical confocal microscopy. Figure 5.5 shows the same reaction profile for STAT5 expression as was seen in western blot analysis for peripheral blood, head kidney and spleen derived lymphocytes. STAT5 protein was not detected in liver cells by this method, confirming the results of the western blot of STAT5 tissue distribution . The tissue distribution and relative level of STAT5 expression may be due to the profiles of cytokines and growth factors to which these types of cells respond. STAT5 regulates the signal transduction of various lymphokines such as IL-2, 7 and 15 (Lin et al., 1995) which are produced by and elicit responses in T cells. Though antibody regents to T cell specific surface makers, such as CD4 or CD 8, have yet to be developed for teleost fishes, there is biological evidence suggesting the existence fish T cells (Secombes et al., 1994). Most of this evidence centers around reports of fish lymphocytes responding to classic T cell mitogens. The predominant responses to lectin based T cell mitogenic stimulus are demonstrated fish cell cultures of spleen, head kidney and peripheral blood lymphocytes, indicating that T-like cells might be present in these tissues (Caspi and Avatlion, 1984; Grondel and Hamersen, 1984). Presumably, since STAT5 is a signal transducer protein for such cytokines as IL-2, a T cell autocrine growth factor, the presence of this protein could be used as an indicator of T like-cells in fish tissues. However, in mammals expression of STAT5 mRNA appears to be constitutive in many tissue types including PBLs and spleen. STAT5 expression is absent in the human kidney, but we observed protein expression in the head kidney cells of rainbow trout, albeit at low levels This may be due in part to the anatomical differences between fishes and humans. The pronephros or head kidney, unlike the human kidney, is also a hematopoietic organ containing a number of leukocytes. 93 Figure 5.5 Confocal immunohistochemical analysis of rainbow trout cells with STAT5 specific monoclonal antibody. Red indicates STAT5 specific staining. Green counter stain is Con A FITC. Panel A: Spleen derived lymphocytes. Panel B: Peripheral blood lymphocytes. Panel C: Liver cells and Panel D: Head kidney leukocytes. 94 B D Figure 5.5 95 Mitogen Signal Transduction and STATS in PBLs of Rainbow Trout To determine if the STATS -like protein detected in PBLs was functionally similar to the STATS proteins of mammals, we used the electromobility shift and super shift assay systems. It has been shown that, upon mitogenic or cytokine simulation of lymphocytes, STATS is rapidly phosphorylated and translocated to the nucleus where it binds to target gene sequence containing the GAS DNA sequence motif (Gilmor and Reich, 1994). Peripheral blood lymphocytes were exposed to Con A for 1 hr in culture, and nuclear extracts were harvested soon after. The extracts were incubated with a radio-labeled GAS primer and then fractionated over a polyacrylamide gel. Figure 5.6 demonstrates a protein binding the labeled GAS primer in lane 3. This suggests that DNA binding proteins, specific for the sequence motif bound by mammalian STAT5s during signal transduction of cytokine or T cell mitogen response, are present in fish PBLs. To determine if the protein binding the GAS primer was antigenically related to STATS we used a monoclonal antibody specific for STATS to super shift the band seen in the shift assay. Again, nuclear extracts were isolated from trout PBLs after Con A mitogen stimulation. An additional step of pre-incubating the nuclear extract proteins with the STATS specific monoclonal antibody was done before adding the labeled GAS primer. After GAS primer was added, the reaction mixture was fractionated over a polyacrylamide gel. The resulting antibody-STATS complex caused a super shift of the band due to the increased molecular weight of the protein complex. This super shifted band (lane 4 of figure 5.6) confirms that a STATS -like protein in rainbow trout is functionally similar to mammalian STATS. The result also indicates that the fish STATS protein is functionally similar to mammalian since it is also translocated to the nuclease with in 1 hour after mitogenic stimulus. 96 Figure 5.6 Electromobility shift and super shift assay with PBL nuclear extracts harvested 1 hour after exposure to Con A. Lane 1: 7 32P labeled 1 k by ladder DNA size markers. Lane 2: control reaction lacking nuclear extract. Lane 3: electromobility shift binding assay with nuclear extract and Lane 4: electromobility Super shift binding assay nuclear extracts pre incubated with anti-STAT5 monoclonal antibody. Arrows indicate shift and super shifted bands. 97 1 2 3 Figure 5.6 4 98 Acknowledgments This study was supported by the United States Department of Agriculture to the Western Regional Aquaculture Consortium under the grant 92-38500-7195 project no. 92080441; an Oregon Sea Grant with funds from the National Oceanic and Atmospheric Administration, Office of Sea Grant, Department of Commerce, under grant NA89AA-D­ SG108, project R/FSD-16; grant NA36RG451, projects R/FSD-23 and Amend. No. 2; a grant from the National Institutes of Allergy and Infectious Disease, T32A107379; and a grant from the National Oceanic and Atmospheric Administration (Salton-Kennedy funds), NA46FD0490. Oregon Agricultural Experiment Station Technical Paper No. 10,761. References Caspi, R. R., and Avatlion, R. R. (1984). Evidence for the existence of an IL-2 like lymphocyte growth promoting factor in bony fish, Cyprinus carpio. Dev. Comp. Immunol., 8: 51-60. Darnell, J. E., Kerr, I. M., and Stark, G. R. (1994). Jak-STAT pathways and transcriptional activation in response to INFs and other extracellular signaling proteins. Science, 264: 1415-1421. Frank, D. A., Robertson, M. J., Bonni, A., Ritz, J., and Greenburg, M. E. (1995). Interleukin 2 signaling involves the phosphorylation of STAT proteins. Proc. Natl. Acad. Sci. USA, 92: 7779-7783. Gilmour, K. C., and Reich N. C. (1994). Receptor to nucleus signaling by prolactin and interleukin-2 via activation of latent DNA-binding factors. Proc. Natl. Acad. Sci. USA, 91: 6850-6854. Grondel, J. L., and Hamersen, E. G. (1984). Phylogeny of interleukins: growth factors produced by leukocytes of cyprinid fish, Cyprinus carpio. Immunology, 52, 477­ 482. Hamblin, A. S. (1993). Cytokines one by one. 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EMBO J., 13: 2182-2191. 101 CHAPTER 6 THESIS SUMMARY Immune Modulatory Genes in Rainbow Trout Two distinct genes sequences were isolated from rainbow trout. Chapter 3 describes the isolation of a gene from trout peripheral blood cells that is significantly related to two human genes termed natural killer enhancement factor (NKEF) (Shau et al., 1994). The protein products from these human genes have been show to enhance the cytolytic killing activity of NK cells (Shau et al., 1993). Chapter 4 describes the isolation of a gene sequence that is also significantly related to a group of mammalian genes termed signal transduction and activators of translation (STAT). Specifically, the STAT gene involved in the transduction of lymphokines IL-2, IL -7 and IL-15, is closely related to the rainbow trout gene. To date only two genes involved in immune modulation have been isolated from fish (Tamai et al 1992 and 1993). These findings help us achieve an understand of the evolutionary aspects of immune regulation in phylogenetically distant species. Biological Characterization of Gene Products By examining the biological functions of the products of these two genes we demonstrated their roles in immune modulation of rainbow trout, and relatedness to their mammalian counterparts. Chapter 4 showed that the protein product from the nonspecific cytotoxic cell enhancement factor (NCEF) gene was antigenically and functionally related to the human NKEF protein. NC cell cytolytic activities of rainbow trout lymphocytes were enhanced significantly when exposed to target cells expressing the NCEF protein. Also, apoptotic killing activity was shown to be enhanced by this protein. NC cells are important to the resistance of fish to viral and parasitic infections (Moody et al., 1985; Graves et al., 1985). Enhancement of the activity of this cell type may be useful in 102 combating diseases of fishes. This factor could be employed as either a prophylactic or therapeutic means for managing fish health. Specifically, fish rearing facilities could administer this factor to fish prior to situation of stress or potential encounters with viral pathogens. Enhance immune surveillance mediated by NC cells would aid in combating the initial stages of virus infection and increase the survivability of infected fish. Chapter 5 demonstrates the existence of STAT5-like protein in trout leukocytes. This protein like its mammalian counterpart may be involved in the intracellular transduction of mitogenic signals. The electromobility shift and super shift assays show that trout STAT5 protein is rapidly translocated to the nucleus and binds to the GAS motif DNA sequence after mitogenic stimulus. This not only demonstrates the functional similarity of these proteins from two phylogenetically distant taxa, but also implies that promoter element sequences for cytokine regulated genes are similar. 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