I. ASCRC General Education Form Group Group XI Natural Science Dept/Program Chemistry Course Title Prerequisite Course # Organic and Biological Chemistry Chem 151, C- or better Credits CHEM 152 3 credits II. Endorsement/Approvals Complete the form and obtain signatures before submitting to Faculty Senate Office Please type / print name Signature Date Holly Thompson x2070/holly.thompson@ umontana.edu Program Chair Mark Cracolice Dean Gerald Fetz III. Description and purpose of the course: General Education courses must be introductory and foundational. They must emphasize breadth, context, and connectedness; and relate course content to students’ future lives: See Preamble: http://www.umt.edu/facultysenate/gened/GEPreamble_final.htm Instructor Phone / Email The Chem 150 series (Chem 151N, 152N and 154N) provides a one year survey of chemistry. Chem 154, the lab component of the series, coordinates with Chem 152, and is taken by most of the Chem 152 students. Chem 152 explores the molecular logic of living organisms. Students learn the structures of organic compounds, and then use "first principles" (fundamental characteristics) to predict physical properties and chemical reactivities of small organic compounds. The logic learned with these simple organic structures is then applied to the more complex molecules that are made and used by living organisms. In addition to biological examples, the molecular logic is applied to aspects of the global carbon cycle. IV. Criteria: Briefly explain how this course meets the criteria for the group. See: http://www.umt.edu/facultysenate/ASCRCx/Adocuments/GE_Criteria5-1-08.htm Chem 152 is not a course on how to apply the scientific method. It is primarily focused on foundational content knowledge and use of that knowledge to draw conclusions about behavior of complex molecules in living organisms. However, examples of specific experiments are used throughout the course to illustrate both questions raised by empirical observation and validation of biochemical theories. V. Student Learning Goals: Briefly explain how this course will meet the applicable learning goals. See: http://www.umt.edu/facultysenate/ASCRCx/Adocuments/GE_Criteria5-1-08.htm Learning goals 1,2, and 4 are achieved primarily through the three lectures per week, assigned practice problems, and biweekly exams. One important component of the early lectures is the use of a molecular model kit, purchased with the textbook. Homework requiring students to explore characteristics of small organic molecules with their model kits is assigned frequently. Biochemical problem-solving skills (recognition and detection of patterns, drawing conclusions, developing conjectures and hypotheses) are developed in recitation. Students meet once a week to work on open-book exercises in small groups. Each recitation exercise typically starts with practice of the content knowledge and then progresses to application of that knowledge to real-world problems drawn from biology, medicine, agriculture and geochemistry (global carbon cycle). The Chem 152 final exam provides an opportunity for students to synthesize what they have learned throughout the semester and practice their biochemical problemsolving skills. The last week of classes, students are given a worksheet leading them through application of the familiar molecular logic to new biological problems. Students are invited to discuss the worksheet problems with their 152 colleagues. Each student must write the exam individually during the scheduled final exam period, without recourse to notes or discussion. VII. Syllabus: Paste syllabus below or attach and send digital copy with form. ⇓ The syllabus should clearly describe how the above criteria are satisfied. For assistance on syllabus preparation see: http://teaching.berkeley.edu/bgd/syllabus.html CHEM 152 Fall 2008 Organic and Biological Chemistry Dr. Holly Thompson office hrs: Monday 9:10-10am, Tuesday 11:10-12am and by arrangement Please email me to arrange an appointment if you have conflicts w/ office hrs. office: CP 402 phone: x2070 e-mail: Chem 152N satisfies Perspective 6, Natural Sciences, for the general education requirement. This course explores the molecular logic of living organisms. Fundamental chemical and physical properties of simple organic compounds are responsible for the organization and function of living organisms: cell structure, energy flow, replication of DNA, etc. Chem 152 students study some of the fundamental properties of organic compounds and examine how these properties affect the activity of biological molecules. Students learn how to apply patterns of structure/function relationship in known carbohydrates, lipids and proteins to new examples, using logical and critical reasoning. The prerequisite for Chem 152 is a grade of “C” or better in Chem 151 or permission of the instructor. Good alternatives include “C” or better in 161 or general chemistry courses from other colleges or universities. Cyberbear doesn’t screen for your chemistry background, but please set yourself up for success. Chem 154 is the Organic and Biological Chemistry Lab course that accompanies Chem 152. Most, but not all, majors require Chem 154. There are advantages to taking the lab concurrently with Chem 152: many 152 concepts are practiced and reinforced in lab, and the lab is easier while the concepts are fresh in your mind. However, if your schedule does not accommodate the lab this semester, you can take 154 next year. (Hang on to your textbook!) Text: required Introduction to General, Organic and Biological Chemistry, 8th edition, Bettleheim, Brown, Campbell and Farrell Assigned reading and problems are posted on the eres site. Solutions Manual: Answers to odd-numbered back-of-the-chapter required problems are found in the back of the textbook. Solutions to the problems are found in the black & white section at the end of the textbook package (notice that the first few pages are corrections to errors in the rest of the section). Model Kit: required Chem 152 model kit Lecture Notes: The lecture notes for each week will be put on electronic reserve by Monday of the following week. You can find the electronic reserve materials at http://eres.lib.umt.edu/eres. The password for our course site is CHEM152. Study Guides: Study Guides will be posted on eres on Monday before the exam. Each exam covers only material through the previous week’s lectures. Exams are cumulative throughout the semester. Weekly Schedule Lectures: Recitations: Help Sessions: Exams: TWRF(3 days) 8:10-9:00am CP 123 M see information for individual sections F 8:10-9:00 alternate weeks, see schedule below CP 123 W 8:10-9:00 alternate weeks, see schedule below CP 123 The jingle of cell phones, private conversations during the lecture and early departures from the classroom are disruptive. Please respect your colleagues. If either issue becomes a problem during the semester, I will institute pop quizzes or other appropriate responses. Course Assessment: Recitation exercises are open-book worksheets. Please bring your textbook, class notes and model kit to recitation. You are encouraged to work with a partner; talking about chemistry is a great way to check your understanding. Please go to the recitation section in which you are officially enrolled. See me if you have a conflict and we will try to accommodate your schedule. The exercises are designed to take ~40 minutes. You must turn in exercises at the end of the period to get credit. Some of the exercises require you to build models and show them to the TA for credit. Exams are multiple choice, 25 questions worth 4 pts each. Most students find that 50 minutes provides plenty of time to complete the exam. Help sheets, periodic tables and calculators are not permitted. Grading is based on the scantron forms, not the written copy of the exam. The written copy of your exam plus a report sheet with your score and the exam key will be returned to you. Exams There are six regular 100 pt exams. The lowest of these exams will be dropped, for a total of 500 possible pts. The last regular exam is shorter (worth 50 pts) and cannot be dropped. If you miss an exam due to legitimate excuse (illness, field trip, etc), you must contact me BEFORE the exam to arrange a makeup exam. Make-up exams will be a mixture of short-answer and multiple choice problems. DSS Students - please email me the first week to qualify for accommodations. Recitations There are fourteen 10 pt recitations. The lowest three will be dropped for a total of 110 possible pts from the recitations. There are no make-up recitations. However, be sure to get a copy of any missed recitation exercise. Final Exam The final exam is scheduled for 8:10-10:00 am on Tuesday, Dec 9. The final exam is worth 100 pts and cannot be dropped. Please schedule your plane reservations, etc for after this time. No early finals! You will be provided with a worksheet to guide your studying for the comprehensive final exam. Getting to Letter Grades The points from exams I-VI (500), exam VII (50), recitations (110) and final exam (100) will be added together, for a total of 760 possible pts. Letter grades will be assigned as follows: ∃93.33% guarantees A ∃90.00% guarantees A∃86.67% guarantees B+ ∃83.33% guarantees B ∃80.00% guarantees B∃76.67% guarantees C+ ∃73.33% guarantees C ∃70.00% guarantees C∃66.67% guarantees D+ ∃63.33% guarantees D ∃60.00% guarantees D<60.00% guarantees F Student Conduct All students must practice academic honesty. Academic misconduct is subject to an academic penalty by the course instructor and/or a disciplinary sanction by the University. All students need to be familiar with the Student Conduct Code. The Code is available at http://www.umt.edu/SA/VPSA/indec.cfm/page/1321 . The majority of Chem 152 students are honest and responsible. Be advised that I do enforce the Student Conduct Code in order to protect the honest students from academic misconduct. Dates Topics Covered (approximate) and Exam Dates (definite) M T W R F 8/25 8/26 8/27 8/28 8/29 recitation 1 introduction alkanes & isomers alkanes & isomers help session, how to succeed in biochemistry M T W R F 9/01 9/02 9/03 9/04 9/05 Labor Day, no classes functional groups functional groups functional groups help session M T W R F 9/08 9/09 9/10 9/11 9/12 recitation 2 polarity, intermolecular attraction, solubility Exam I polarity, intermolecular attraction, solubility acid-base chemistry M T W R F 9/15 9/16 9/17 9/18 9/19 recitation 3 acid-base chemistry redox chemistry redox chemistry help session M T W R F 9/22 9/23 9/24 9/25 9/26 recitation 4 redox chemistry Exam II chirality chirality M T W R F 9/29 9/30 10/01 10/02 10/03 recitation 5 chirality linkages linkages help session W R F 10/08 10/09 10/10 10/06 recitation 6 10/07 linkages 30th instructional day, last day to drop/add Exam III linkages carbohydrate chemistry M T W R F M T 10/13 10/14 10/15 10/16 10/17 10/20 recitation 7 carbohydrate chemistry carbohydrate chemistry carbohydrate biology help session recitation 8 10/21 carbohydrate biology W R 10/22 Exam IV M T 10/23 carbohydrate biology F 10/24 lipids M T W R F 10/27 10/28 10/29 10/30 10/31 recitation 9 lipids lipids lipids help session M T W R F 11/03 11/04 11/05 11/06 11/07 recitation 10 Election Day, no classes Exam V proteins proteins M T W R F 11/10 11/11 11/12 11/13 11/14 recitation 11 Veterans Day, no classes proteins proteins help session M T W R F 11/17 11/18 11/19 M T W R F 11/24 11/25 11/26 11/27 11/28 recitation 13 enzymes Exam VI nucleic acids nucleic acids M T W R F 12/01 12/02 12/03 12/04 12/05 recitation 14 regulation of gene expression regulation of gene expression Exam VII (50 pts) review, wrap-up T 12/09 Final Exam 8-10am No early exams will be given. recitation 12 enzymes Thanksgiving Holiday 11/20 “ 11/21 “ Assigned Reading and Problems from the Text Edition 8 Please assume that any problems embedded in sections of the text assigned for reading are important. The problems listed below do not include these embedded problems. Lecture 1 Alkanes and Isomers reading: ch 10.1-3; ch 11.1-6, 8A; ch 12.2B problems: 10.7-10, 10.12-15, 10.17; 11.10-16,(*use your model kit to help solve 11.16) 20, 23(a,b,c,f), 24(all except e), 25-32, 41, 52-53; 12.21-27 If you are looking for more review of fundamental concepts: 4.50(a,c,e), 51, 53(a,b,c,e), 54, 61 Lecture 2 Functional Groups reading: ch 10.4; ch 12.1-3; ch 14.1A,B; ch 17.1, 2A; ch 16.1-2A; ch 13.1-2; ch 14.4A,B ch 18.1-2A; problems: 10.18-36, 40, 43-45, 49-51; 12.11-20, 29-30, 55-56, 57(b), 57-58; 14.8-11, 12(c,d,e,f), 13(b,c,d,e,f), 14-15, 57, 66(a); 17.9, 12-15, 16(b,c,e,f), 17(a,b,c,d,f), 18(a,b,c), 19-20, 56, 58, 59(a,b,c,d,e,f), 68a; 18.4 (except chiral question), 5(a,b,c), 6(a,b), 7(b,c,d), 18(a); 16.6,7,9(all except e),10 (a,b,d), 11-2, 13(a,b), 14(a), 28, 29, 40(a,b,c,e); 11.17-19(all); 13.2-10,(*why is the first part of the answer to 5 not correct, what is the evidence for your argument?),12(b,g,h), 13(a,b,d,f),14, 15, 40-41; 14.41 Lecture 3 Polarity, Intermolecular Attraction and Solubility reading: review ch 4.4-5, 7,9A, 10,-11 and Tables 4.5, 4.6, 4.8; new 11.7; 12.4; 14.1c; 16.3; 17.3; 18.3-4 problems: 4.31, 4.72, 4.79-80 10.46-48; 11.33-39, 54-55; 14.16-26, 56, 59-62; 16.15-18, 43-44; 17.21-26, 60-61; 18.12-18 Lecture 4 Acid-Base Chemistry Chapter 9 is well-written; please review 9.1-5, 9.7-8 (we won’t use ion product of water or pOH), 9.10-11. reading: ch 18.5A,B; ch 16.4-5; chemical connections 16D problems: 18.21-23, 26-29, 31, 37(b,c); 16.21-22, 23(pKb=3.2, so pKa=10.8, use pKa to solve), 16.25-6, 45, 47(b,c), 48, 51 Lecture 5 Redox Chemistry reading: ch 14.2B,C; ch 17.4A; ch 12.6 B,D problems: 14.31-34; 17.27-33, 36(a,c,d), 37(a,c,d), 62; 34(b,e,f), 36(b), 38(a), 41-43, 46(a,b), 60-62 Lecture 6 Chirality 12.33(b), reading: ch 15.1-5 problems: 15.7-10, 12-33 Lecture 7 Linkages reading: ch 19.1-5; ch 17.4C problems: 19.6-7, 10-12, 16-23, 25-27, 36-37; 17.41 Lecture 8 Carbohydrate Chemistry reading: ch 20.1-4, ch 20.5 first paragraph problems: 20.6-20, 22-31, 33, 39-43, 49 Lecture 9 Carbohydrate Biology reading: ch 20.4-6 problems: 20.38, 46-48, 54-59, 62-63 Lecture 10 Lipids reading: ch 21 sec 1-12 problems: 21.2-24, 25 (ceramide = sphingosine+fa), 26-27, 28 (use the lecture notes rather than solutions manual, which provides only part of the answer), 30-33, 36-37, 39-44, 46-51, 64-70, 72-78 Lecture 11 Proteins reading: ch 22.1-12 problems: 22.3-21, 23-41, 44, 46-48, 50-58, 70, 72-73, 75-78 Lecture 12 Enzymes reading: ch 23.1, 3 (cofactors, coenzymes, substrates, active sites; don’t worry about the other terms in this chapter), 4, 5C, 6; Chemical Connections 23C problems: 23.1-6, 11-12, 16. 19-20, 29-30, 32, 56-57, 70-71 Lecture 13 Metabolism reading: ch 27.1-7; ch 28.1, 2(A,B), 5, problems: 27.1-2, 6-7, 29-30, 35-36; 28.2-3, 12 Lecture 14 Nucleic Acids reading: ch 25.1-6 problems: 25.2-7, 16-18, 20, 23, 27-31, 49-50 Lecture 15 Regulation of Gene Expression reading: ch 26.6 problems: 26.33, 36 *Please note: As an instructor of a general education course, you will be expected to provide sample assessment items and corresponding responses to the Assessment Advisory Committee.