2D Correlation Experiments: HSQC, HMQC, HMBC, BCMB/CHEM 8190 Two Dimensional NMR Spectra A General Scheme: other mixing and evolution periods can be added to increase dimensions Preparation Evolution 1 (Increment t1) Mixing Evolution 2 (observe t2) time Example: COSY – mixing is scalar coupling 90x d1 (recover) 90x (mix) t1 (evolve) t2 (observe) 2D –NMR - FIDs are Transformed in t2, then in t1 t1 t1 FT 1 2 2 Heteronuclear Single Quantum Coherence HSQC 1H-15N Pairs in Amide Bonds of Proteins Provide Convenient Reporters at Each Amino Acid Along the Backbone Just Requires 15N Labeling HSQC Spectrum of H-N Amides in a Protein Red – without PI(4)P Blue – with PI(4)P Phosphoinositide interactions with PH domain of FAPP1 at a bicelle surface Preparation Period for HSQC Experiment Heteronuclear magnetization transfer used to enhance polarization (INEPT): Product operator description 1H 1H(I) 90x 15N 180y 90y 15N(S) 90x Iz -Iy -2IxSz -2IzSy = 1/4J Evolution and Detection in HSQC 180x 180x 90x t2 t1/2 t1/2 Sz (S, t1) (180 decouples I) -2IzSy 90x 180x decouple -2IzSy cos(S t1) + 2IzSx sin(S t1) Ix(/2)+Sx(/2) 2IySz cos(S t1) - 2IySx sin(St1) (unobserved 2Q) IzSz (J2) (chem shift refocuses) -Ix cos(S t1) Iz (I, t2) -Ix cos(S t1)cos(I t2) -Iy cos(S t1)sin(I t2) Obtaining Quadrature: Substitute a 90y 15N Pulse and Save Separately (States) 1H(I ) 90x 15N(S) 180y 90y 90y = 1/4J Iz -Iy -2IxSz 2IzSx 180x 180x 90x t2 t1/2 t1/2 90x 180x decouple Sz (S, t1) (180 decouples I) 2IzSx 2IzSx cos(S t1) - 2IzSy sin(S t1) Important Features of HSQC Spectra • Start with 1H magnetization: gain H / N A factor of 10 in sensitivity • Detect 1H magnetization: gain (H / N)2 Another factor of 100 • Even though you must acquire 32-64 t1 points, far more sensitive than direct detection. 1H-13C HSQC can be run at Natural Abundance 2 3 1 Spectral Display of HMQC Looks Just Like HSQC 1H(I) t2 180x 180x t1/2 t1/2 90x 180y 15N(S) 90y 90x decouple 180x Iz -Iy -2IxSz -2IxSx -2IxSx = (-IxSx + IySy) + (-IxSx –IySy) = zero and 2Q coherence 180x changes sign of IySy parts, hence interchanges zero and 2Q Evolves as chemical shift of 15N, just like HSQC Differences in relaxation properties and lack of direct coupling HMBC – coherence transfers can be tuned to eliminate one-bond coupling and emphasize long-range couplings 1H(I) t2 180x 180x t1/2 t1/2 90x 180y 15N(S) 90y 90x decouple 180x Choose = 1/4JIS1 for three-bond: Iz -Iy -2IxSz -2IxSx -2IxSx = (-IxSx + IySy) + (-IxSx –IySy) = zero and 2Q coherence Choose = (2n+1)1/2JIS1 for one-bond: -Iy Iy Iz = no signal HMBC of Carbohydrates is Useful in Identifying Linkages HSQC 2 HMBC 3 1