AN ABSTRACT OF THE THESIS OF Yuko Eguchi for the degree of Master of Science in Animal Science presented on September 22. 2000. Title: Phospholipase A2 mRNA Expression in Testes from Roosters (Gallus domesticus) Characterized by High or Low Sperm Mobility Phenotype. Approved: Redacted for privacy David P. Froman Previous research has shown that sperm mobility is a primary determinant of fertility in fowl. Sperm mobility denotes the net movement of a sperm population, and males can be characterized by phenotype. Sperm acylcarnitine content differs between low and high sperm mobility phenotypes. The release of acyl groups from phospholipids within sperm depends on the action of the enzyme phospholipase. Inhibition of phospholipase A2 (PLA2) activity eliminates sperm motility, thereby rendering sperm immobile. This research was performed to test whether cPLA2 was expressed differentially in roosters characterized by low or high sperm mobility phenotype. cPLA2 expression in the two phenotypes was compared using reverse transcription - polymerase chain reactions. The cDNA amplified was a 352 nucleotide fragment encoding the Ca 2+ binding domain of cPLA2. Two sequential experiments were performed using full- and half-sib roosters. In the first experiment (n=3 full­ sibs per phenotype), cPLA2 expression was greatest in testes from the high phenotype relative to ~-actin or 18S rRNA (P < 0.05 and P < 0.0057, respectively). The average cPLA2 : p-actin ratios for high and low sperm mobility phenotypes were 0.63 ± 0.260 (mean ± SEM) and 0.32 ± 0.123, respectively. The cPLA2 : 18S rRNA average ratios were 0.74 ± 0.158 and 0.38 ± 0.135 for high and low sperm mobility phenotypes, respectively. In the second experiment (n=6 half-sibs per phenotype), the high mobility phenotype also showed greater (P < 0.023) expression of cPLA2 relative to the 18S rRNA control with averages of 0.74 ± 0.141 and 0.49 ± 0.104 for high and low sperm mobility phenotypes, respectively. Moreover, sequence analysis of the nucleotide fragment showed no difference between phenotypes. cPLA2 expression clearly differed between sperm mobility phenotypes. It was concluded that a difference in the regulation of cPLA2 mRNA expression contributes to variation between lines of roosters generated by selection for sperm mobility. ©Copyright by Yuko Eguchi September 22, 2000 All Rights Reserved Phospholipase A2 mRNA Expression in Testes from Roosters (Gallus domesticus) Characterized by High or Low Sperm Mobility Phenotype. by Yuko Eguchi A THESIS Submitted to Oregon state University in partial fulfillment of the requirements for the degree of Master of Science Presented September 22, 2000 Commencement June, 2001 Master of Science thesis of Yuko Eguchi presented on September 22, 2000 Approved: Redacted for privacy Major Professor, representing Animal Sciences Redacted for privacy He of Department of Animal Sciences Redacted for privacy Dean of raduate School I understand that my thesis will become part of the permanent collection of Oregon State University libraries. My signature below authorizes release of my thesis to any reader upon request. Redacted for privacy Yuko Eguchi, Author ACKNOWLEDGEMENTS I didn't know it but I bit off more than I could chew when I decided to get a Master's degree in Animal Sciences. In hindsight, I can safely say that I could not have reached this point without the help and support from so many friends and colleagues. First, I would like to thank and acknowledge all of the people who helped me and are not named here, you know who you are. I mean no disrespect but over the last two years the list has become significant in both length and quality of individual. I would like to give special thanks to both Dr. Alfred R. Menino and Dr. David P. Froman for giving me the opportunity to participate on this project and donating so much time, effort, and expertise. which I would not have known where to begin. without I appreciate the mentoring that you have given me, and feel as though I can never thank either one of you enough. I would like to thank all the committee members, Dr. Dahong Zhang, Dr. Darlene D. Judd, and Dr. Jim R. Males for taking time out of their busy schedules._ I consider it an honor to have such a distinguished panel of people willing to participate in my thesis defense. without the help from Terry Brandebourg, Viola Manning, Ying-Yi Xiao, Allen FeItmann , I would never have gotten the results in the laboratory that I did. Your technical advice and expertise proved to be invaluable to me and my research. Thank you. I would like to extend my eternal gratitude to my friends and peers. While I appreciate the help on my project, I value my friendship with each of you more than anything else. It is you gals that made my job not seem so much like work but more like fun. Thank you CoreyAyne Singleton, Katy Paul, Sara Supancic, Lisa Gemmill, and Jonna Collins. I would like to also thank Stephanie Greenway, Allison Walker, and Tobin Knighton for late night proof readings and everlasting encouragement. I only hope I can and will be able to return the favor to each and everyone who has helped me get this far. Thanks again. TABLE OF CONTENTS Page Introduction. 1 Literature Review • 4 Materials and Methods .18 Results .25 Discussion. .31 References. .36 Appendix. .42 LIST OF FIGURES Figure 1. Testicular ~-actin and cPLA2 expression in roosters with high or low sperm mobility phenotypes • • • . • • • . . • • • • • . • • • 26 2. Testicular cPLA2 and 18S rRNA expression in roosters with high or low sperm mobility phenotypes • • • • • • • . • • • • . . • • 26 3. Testicular ~-actin and 18S rRNA expression in roosters with high or low sperm mobility phenotypes . . . . . . . . . . . . . . .. . . 29 LIST OF TABLES Table Page 10 categorization of phospholipase A20 0 0 0 0 0 0 0 08 20 PCR primer sequences for cPLA2 and p-actino 0 0 0 22 30 cPLA2 mRNA expression between sets of full-sib roosters representing two sperm mobility phenotypes . . . . . . • . . . . . . . . • . . . 27 40 cPLA2 mRNA expression between sets of half-sib roosters representing two sperm mobility phenotypes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 Phospholipase A2 mRNA Expression in Testes from Roosters (Gallus Domesticus) Characterized by High or Low Sperm Mobility Phenotype. INTRODUCTION Sperm cells are self-propelled DNA delivery vehicles. While this fact may seem trite at face value, it must be remembered that the concept has been developed over the course of nearly 300 years. For example, in the late 17th century when sperm cells were first visualized, it was believed that each cell carried a pre-formed individual. Thus, it took many years for scientists to realize that sperm cells carried chromosomes, that this payload was half the complement characteristic of the species, and that each of these chromosomes contained a mixture of paternal and maternal genes as opposed to a replica of an intact chromosome from either parent. Further advances were made after the advent of the electron microscope; for such instrumentation afforded the visualization of the axoneme, which is the molecular motor within the sperm's tail. Likewise, the discovery of second messengers, such as Ca 2+ and cAMP advanced the study of sperm motility. In review, it would seem that 2 there was little else to be gained from the study of sperm. However, in the late 1990s, a new trait was discovered by D.P. Froman at Oregon state University: sperm mobility. This term denotes the net movement of a sperm cell population. One aspect of the discovery was that normal, fertile males showed extreme variation in sperm mobility. In other words, even though two males might be considered normal as evidenced by variables such as sperm count, structure, and viability - and even though these two males might be fertile, i.e. capable of producing offspring - one of these males might actually have greater fitness due to the tendency of his sperm to move en masse under physiological conditions. This thesis represents the first attempt to determine the molecular basis for sperm mobility phenotype. It is noteworthy that sperm mobility is a quantitative trait. Therefore, multiple genes are important for expression. However, a series of experiments had demonstrated that an enzyme known as phospholipase A2 (PLA2) might play a significant role. Protein synthesis depends upon the translation of messenger RNA (mRNA) into a sequence of amino acids. consequently, the code within the mRNA and the amount of mRNA in a cell are important considerations for any given protein. This research investigated the 3 expression of PLA2 mRNA in roosters manifesting an extreme difference in sperm mobility phenotype due to genetic selection. 4 LITERATURE REVIEW Internal fertilization in the domestic fowl depends upon the following phenomena: motile sperm ascending the hen's vagina, sperm storage within the oviduct's sperm storage tubules (SST), and an acrosome reaction following sperm egress from the SST. Allen and Grigg (1957) were the first to show that aggressive sperm ascension was dependent upon sperm motility in the vagina. The vaginal sphincter, which is located between the shell gland and vagina, serves as a barrier to the movement of sperm within the oviduct. Bakst et al. (1994) wrote an exhaustive account of movement and storage of sperm in the oviduct. Sperm are stored within specialized tubules located distal to the vaginal sphincter. These tubules enable the oviduct to retain a resident population of viable sperm when the oviduct contains a nascent egg. mechanism over many days. Sperm egress by an unknown This phenomenon approximates an exponential decay based upon sperm associated with the blastodisc in a sequence of eggs following a single insemination (Pizzari and Froman, unpublished data). summary, sperm sequestration is critical to internal fertilization in fowl, and sperm motility is critical for sperm sequestration. In 5 Average straight-line velocity (VSL) of fowl sperm ranges between 30 to 40 2000). ~m/s (Froman and Feltmann, However, VSL of individual sperm cells ranges between 1 and 140 ~m/s. Froman and Feltmann (2000) demonstrated that roosters in a population can be characterized by differences in the concentration of motile sperm within their ejaculates. These researchers have correlated phenotypic differences in the concentration of motile sperm with phenotypic differences in sperm mobility. Sperm mobility is defined as the net movement of a sperm population from one location to another (Froman and Feltmann, 1998). Maintenance of the motile state at body temperature is dependent upon extracellular ca 2+, intracellular phospholipase A2 (PLA2) activity, long chain fatty acids complexed with carnitine, and the availability of oxygen (Froman, unpublished data). Therefore, spermatozoal PLA2 activity appears to be critical to the fertility of roosters, as it generates an endogenous substrate within sperm cells. As previously mentioned, sperm mobility denotes the net movement of a sperm population (Froman and Feltmann, 1998). trait. Sperm mobility is a quantitative Thus, roosters can be identified within a population that are characterized by distinct sperm 6 mobility phenotypes. between phenotypes. Sperm morphology does not differ However, sperm from the low phenotype were characterized by reduced acyl carnitine content, oxygen consumption, and ATP content (Froman and Feltmann, 1998; Froman et al., 1999). Long-chain fatty acids destined for p-oxidation within the mitochondrial matrix must first be activated by esterification with coenzyme A. Next, the activated acyl group is conjugated with carnitine on the exterior side of the inner mitochondrial membrane prior to translocation. Parenthetically, p-oxidation of fatty acids is an oxygen-dependent process. In review, it would appear that the release of free fatty acids is critical to expression of sperm mobility phenotype. This assumption is supported by the observation that arachidonyltrifluoromethyl ketone, a specific inhibitor of cytosolic PLA2, inhibits fowl sperm motility at micromolar concentrations (Froman, unpublished data). However, to date, much PLA2 research has been conducted in light of the discovery that the enzyme plays a role in signal transduction (Balsinde et al., 1999). Intracellular phospholipases (e, 0, Al and A2) can be activated when cells are stimulated by diverse agonists. The enzymes catalyze the cleavage of membrane phospholipids (Borsch-Haubold, 1998) and produce a 7 variety of lipid mediators, which represent an important step in signal transduction (Miguel et al., 1999). PLA2 hydrolyzes the sn-2 fatty acyl bond of phospholipids to liberate free fatty acids and lysophospholipids (Miguel et al., 1999). PLA2 plays a major role in diverse cellular processes including host defense, signal transduction, membrane phospholipid repair in response to oxidative damage, membrane adaptation to temperature changes, and phospholipid digestion and metabolism (Dennis, 1994). PLA2 also provides precursors for eicosanoid generation, which is important for homeostasis regulation, e.g. maintenance of vascular tone, blood pressure, uterine and glandular function, and the acute inflammation response (Borsch­ Haulbold, 1998). Mammalian cells contain several structurally diverse PLA2 enzymes that can occur together in the same cell (Table 1). In 1997, the classification system of PLA2 was revised based on DNA sequence (Dennis, 1997). All Group I, II, and III proteins are extracellular or secretory enzymes (SPLA2). They are characterized by 5 to 8 disulfide bonds that impart a rigid tertiary structure (Balsinde et al., 1999). The enzyme is also 8 Table 1 categorization of phospholipase A2. Group Subgroup Sources Type Size (kDa) I A Cobra, kraits Secreted 13-15 B Porcine/human Pancreas Secreted 13-15 A Rattle snakes, vipers, human synovial fluid/polatelets Secreted 13-15 B Gaboon viper Secreted 13-15 C Rat/mouse testes Secreted 15 Bees, lizards Secreted 16-18 A Raw 264.7/rat kidney, human U937/platelets Cytosolic 85 B Human brain cytosolic 100 C Human heart/skeletal muscle Cytosolic 65 V Human/rat/mouse heart/lung, P388D1 macrophages Secreted 14 VI P388D1 macrophages, chinese hamster ovary cells Cytosolic 80-85 A Human plasma Secreted 45 B Bovine brain Cytosolic 42 IX Mice, snail Secreted 14 X Human leukocytes Secreted 14 II III IV VII (Balsinde et al., 1999) 9 characterized by a low molecular weight, no specificity for a fatty acid at sn-2, and the requirement of a millimolar ca 2+ concentration for catalysis (Dennis, 1994). The relatively high number of disulfide bonds ensures stability against proteolysis and resistance to denaturation. Thus sPLA2 remains active in extracellular fluid (Balsinde et al., 1999). In addition to its primary role in the digestion of dietary lipid (Miguel et al., 1999), the Group IB pancreatic sPLA2 also appear to play a role in inflammation (Vadas et al., 1993). In the last few years, additional forms of the enzyme have been discovered (Dennis, 1994). Group V sPLA2 is found primarily in cardiac tissue (Chen et al., 1994) and is involved in arachidonic acid release (Balboa et al., 1996). The Group X sPLA2 has been found in immune tissues where its function remains unclear (Cupillard et al., 1997). When PLA2 is classified according to its biological properties, there are three main types: sPLA2, the Group IV cytosolic PLA2 (CPLA2), and intracellular ca 2+-independent PLA2 (iPLA2i Balsinde et al., 1999). There are several distinct cPLA2 enzymes that share no homology to the sPLA2 enzymes. An 85-kDa iPLA2 is the most recently identified and is ubiquitously expressed (Ackerman and Dennis, 1995). characteristics with sPLA2 and cPLA2. It shares some The iPLA2 10 exhibits no substrate specificity for fatty acids at sn­ 2 of phospholipids, and similar to sPLA2, post­ translational modifications have not been discovered. Both cPLA2 and iPLA2 have identical molecular weights (Kda) , are found at similar intracellular sites, and may have a common catalytic mechanism (Balsinde and Dennis, 1997). All iPLA2 enzymes contain eight ankyrin unique repeats and exist as a multimeric complex, which allows them to be Ca 2+ independent (Tang et al., 1997). It has been suggested that iPLA2 functions in the steady-state remodeling of phospholipid fatty acyl groups (Balsinde et al., 1995). A distinct 85-kDa cPLA2 (Group IV) has been extensively studied due to its importance in agonist­ induced arachidonic acid release (Clark et al., 1995; Leslie,1997). This ca 2+-dependent PLA2 is present in the cytosol of a variety of cells including human neutrophils (Syrbu, 1999), human monoblasts U937 (Kramer et al., 1991), and macrophages. This cPLA2 is the only PLA2 identified that has specificity for sn-2 arachidonic acid (Balsinde et al., 1999). Even though cPLA2 possesses PLA1' lysophospholipase and transacylase activities, the enzyme was designated as a phospholipase (Group IV; Dennis, 1997). cPLA2 has a calcium-dependent lipid-binding domain (C2) at its N-terminus and a catalytic unit which forms an unique shape. Active site 11 residues include Arg-200, Ser-228, and Asp-549. These three amino acids are necessary for multiple catalytic activities (Pickard et al., 1996). The C2 domain has been found in signal-transduction and vesicle-fusion proteins, including protein kinase C, GTPase-activating protein, synaptotagmin and phospholipase COl (Dessen, 2000). consists of eight antiparallel ~ The C2 domain strands interconnected by six loops that fold to form a sandwich. This~­ sandwich coordinates between one to three Ca 2+ atoms with a group of acidic residues on three ca 2+ binding loops (Dessen et al., 1999). Amino acids located at or around the peak of three Ca 2+ binding loops are responsible for membrane binding of cPLA2 by serving as interface recognition (Dessen, 2000). The catalytic mechanism of cPLA2 starts with a serine-acyl intermediate, using Ser-228 as the nucleophilic residue, followed by catalysis with Arg-200 and Asp-549. Ser-228 and Asp-549 are located at the bottom of a deep and narrow cleft, which is at the center of a hydrophobic funnel. This funnel allows cPLA2 to selectively cleave arachidonyl phospholipids (Dessen et al., 1999). Dessen et al (1999) also revealed that there is a flexible lid that is capable of moving to yield substrate access to the active site. 12 Ubiquitously expressed cPLA2 is regulated at the transcriptional level to ensure that the cellular concentration of free arachidonic acid is controlled, as cPLA2 plays an essential role in arachidonic acid release and inflammation (Leslie, 1997; Miguel et al., 1999). For example, cytokines and growth factors, such as interleukin (IL)-l, tumor necrosis factor (TNF), stem cell factor (SCF), and IL-3 increase cPLA2 messenger RNA and protein in a variety of cell types. The increased expression correlates with enhanced prostaglandin production (Lin et al. 1992). The gene for cPLA2 contains certain characteristics of a housekeeping promoter in which there is no TATA box. there is no GC-rich region or SP1 sites. In addition, In the promoter region of the gene, there is a multiple pyrimidine sequence that controls basal expression (Leslie, 1997). sites for transcription factor binding domains that have been identified by DNA sequence analysis include three AP-1, two PEA-3, one Nf-kappaB motifs, and a glucocorticoid response element (Leslie, 1997; Bingham and Austen, 1999). The presence of a glucocorticoid response element suggests that steroids possibly suppress the synthesis of cPLA2 (Leslie, 1997). There are also ATTTA motifs at the 3' untranslated region that may be another regulation site through stabilizing transcription (Bingham and Austen, 1999). 13 CPLA2 is also regulated post-translationally by Ca 2+ and phosphorylation status (Qiu et al., 1998). As previously mentioned, the N-terminus of cPLA2 contains a C2 domain, which is important for ca 2+-dependent binding of cPLA2 to membrane and phospholipid vesicles (Nalefski et al., 1994). cPLA2 trans locates from the cytosol to the nuclear envelope, endoplasmic reticulum membrane, and plasma membrane to induce arachidonic acid release in a ca 2+-dependent fashion (Schievella et al.,1995; Leslie, 1997). Reynolds et al. (1993) demonstrated that the following metal ions can replace Ca 2+ to exert similar effects: Ba 2+, Mn2+, sr 2+, and Mg2+. High concentrations of NaCl and Na2S04 can also replace Ca 2+. These data suggest that Ca 2+ may promote membrane association rather than catalysis (Dennis, 1994). Therefore, a micromolar increase in intracellular Ca 2+ concentration induces an allosteric change in the C2 domain that helps place the catalytic domain relative to its substrate (Dessen, 2000). Mitogen-activated protein kinase (MAPK) is also important for cPLA2 activation. potential phosphorylation sites. There are multiple However Borsch-Haubold (1998) stated that Ser-505 and Ser-727 are critical. Ser-505 and Ser-727 are conserved in cPLA2 from diverse species, such as humans, mice, chickens, and zebrafish (Leslie, 1997). The kinase that is responsible for 14 phosphorylation of Ser 727 has not yet been identified, but it is not MAPK (Leslie, 1997). Dessen et al. (1999) stated that Ser 505 phosphorylation is required for optimal orientation between the C2 and catalytic domains, because Ser-505 is located close to the linker region of the C2 and catalytic domains. According to Kramer et al. (1996), chinese hamster ovary cells require phosphorylation of Ser-505. However, in human platelets, phosphorylation of Ser-505 is not required for arachidonic acid release. This suggests that there are other mechanisms for activation. In addition to calcium and phosphorylation regulating CPLA2 activity, alternative mechanisms exist. Mosior et al. (1998) demonstrated that CPLA2 is activated by and has a high affinity for phosphatidylinositol 4,5 bisphosphate (PIP2) in a 1:1 stoichiometry in lipid vesicles. This membrane affinity is accompanied by an increase in cPLA2 activity. Interestingly, PIP2 can decrease the Ca 2+ requirement for CPLA2, so that under certain conditions, CPLA2 can work independently from ca 2+ (Mosior et al., 1998). cPLA2 may contain pleckstrin homology domains (PH) where proteins localize on membranes by binding polyphosphoinositides. Mosior et al. (1998) has not shown conclusive homology to any PH domain sequence in cPLA2. However, cPLA2 has a small region of basic 15 residues that is similar to phospholipase COl which binds PIP2. The relationship of the PH domain and polyphosphoinositides with cPLA2 needs further study. Recently, concerted cellular regulation by cPLA2 and sPLA2 has been discovered in arachidonic acid generating cells. The activation of cPLA2 is mediated by several signals such as phosphorylation cascades, increased intracellular Ca 2+ and binding to PIP2 (Balsinde et al., 1999). In cells that do not express sPLA2, cPLA2 accounts for the majority of arachidonic acid released. In platelets, the role of sPLA2 in arachidonic acid release cannot be demonstrated, suggesting cPLA2 is the only effector in this cell system (Bartoli et al., 1994). On the other hand, for cells with sPLA2, the majority of arachidonic acid release is shown to be mediated by activation of sPLA2. Once this enzyme is secreted, it associates with the outer surface of cells but nonetheless releases arachidonic acid internally, which leads to eicosanoid production. More importantly, researchers have demonstrated that sPLA2 has a dependency on cPLA2 activation, i.e. cPLA2 is required for sPLA2 to function correctly, but not vice versa (Balsinde et al., 1999). Balsinde and Dennis (1996) proposed that cPLA2 rearranges the membrane and allows sPLA2 to amplify the primary response initiated by cPLA2. Murakami et al. 16 (1998) stated that this bidirectional interaction between cPLA2 and sPLA2 may represent a general action leading to maximum arachidonic acid release. Therefore, cPLA2 also plays a key role as an arachidonic acid release signal, followed by sPLA2 activation as an effector (Balsinde et al., 1999). It is evident that cPLA2 plays dual roles; participating in a process to activate sPLA2 and in release of arachidonic acid (Balsinde et al., 1998). In summary, much is known about PLA2 in signal transduction. However, relatively little is known about the role of PLA2 in energy production, and ATP synthesis is critical for expression of sperm mobility phenotype. Based on a series of experiments (Froman and Feltmann, 1998; Froman et al., 1999; Froman and Feltmann, 2000; Froman, unpublished data), PLA2 appeared to be critical to the maintenance of fowl sperm motility at body temperature over a time course of minutes to hours. Consequently, the release of an endogenous substrate within fowl sperm may enable them to ascend the hen's vagina and enter the sperm storage tubules. In view of the value of genetic models in biological research, the overall objective of this thesis was to evaluate cPLA2 expression in two family groups of full- and half-sib roosters that differed in sperm mobility phenotype. Specifically, expression levels were compared by reverse 17 transcription -polymerase chain reaction (RT-PCR). Second, the DNA sequences of the calcium binding domains (C2) were compared. 18 MATERIALS AND METHODS A total of 18 sexually mature New Hampshire roosters were used for this project. Roosters differed (P < 0.001) in sperm mobility phenotype as measured by Froman and Feltmann (1998). In the first experiment, 3 full-sib roosters were used per phenotype. In the second experiment, 6 half-sib roosters were used per phenotype. All animals were housed in cages and had free access to food and water. Roosters were euthanized by cervical dislocation and immobilized by electrical shock. The right testis was exposed. A 1.6 cm3 section was aseptically placed in a microcentrifuge tube and snap frozen in an ethanol/dry ice bath. stored at -80°C prior to RNA extraction. Samples were Total RNA was isolated from approximately 5 mm3 of testis tissue using acid guanidinium thiocyanate / phenol/chloroform extraction as described by Chomczynski and Sacchi (1987). RNA was re-solubilized in autoclaved distilled water and stored at -80°C. RNA was quantified and assessed for purity by UV-spectrophotometry. Reverse transcriptase-polymerase chain reactions (RT-PCR) were conducted using procedures described by Arcellano-Panlilio and Schultz (1993) with modifications. In the first experiment, cPLA2 expression was compared to ~-actin and 18S rRNA 19 expression using relative quantitative RT-PCR. ~-actin compare cPLA2 to RNA (5 ~g 0.5 ~g) To expression, equivalent total from each tissue sample was incubated with oligo (dT)12-18 primers (Gibco BRL, Grand Island, NY) for 10 min at 70°C in a total volume of 12 the mixture was chilled to 4°C. ~l and Four microliters of 5x first-strand buffer (250 mM Tris-HCL, pH 8.3, 375 mM KCl, and 15 mM Mg C12), 2 1 ~l ~l 0.1 M dithiothreitol (OTT), 10 mM dNTP mix (10 roM for dATP, dGTP, dTTP, and dCTP), and 1 ~l (200 U) superscript II reverse transcriptase (Gibco BRL) were added to each tube. Tubes were incubated at 42°C for 120 min and then incubated at 95°C for 10 min to inactivate the reverse transcriptase. 30 ~l. ~l The RT reaction mixture was diluted with of sterile distilled water to a total volume of 50 To compare cPLA2 expression relative to 18S rRNA, RT was conducted with 2 (50~i ~l of random decamer primers Ambion, Austin, TX) instead of oligo (dT) 12-18 primers. Incubation temperatures were the same as for oligo dT priming. For comparison of cPLA2 to was conducted using 10 ~l ~-actin expression, PCR of RT product. The PCR 20 reaction mixture contained 4 U Taq DNA Polymerase (Promega, Madison, WI) in a total volume of 50 ~l consisting of 2.0 roM Tris-HCl (pH 8.0), 10.0 roM KCl, 0.01 roM OTT, 5% (v/v) glycerol, 0.05% (v/v) roM EDTA, 0.1 Tween@20, 0.05% (v/v) Nonidet@-40, 2.5 roM MgC12, 0.2 dNTP mix, sterile distilled water, and 2.0 roM ~ oligonucleotide primers specific for cPLA2 or p-actin. Mineral oil was used to cover each reaction mixture. For comparing cPLA2 expression relative to 18S rRNA in the first and second experiment, relative quantitative PCR was conducted using the QuantumRNAm 18S Internal Standards Kits (Ambion) as per the manufacturer's instructions. The 18S rRNA primer: competimer ratio was 2:8 and 3:7 for quantifying cPLA2 and p-actin expression, respectively. competimer technology allows modulation of the efficiency of 18S rRNA amplification without affecting amplification of the target gene in multiplex PCR. The 18S rRNA competimer primers have modified 3' ends that block extension by DNA polymerase enabling relative amplification efficiency of 18S rRNA cDNA to be reduced without primers being the limiting factor and loss of relative quantitation. After 18S rRNA primers and competimers were added, procedures were the same as for - - - - - - - 21 the initial part of the first experiment. In the case of ~-actin expression relative to 18S rRNA in the second experiment, PCR reactions had to be carried out in different tubes as single primer reactions instead of multiplex primer reactions, due to unpredicted interactions between ~-actin and 18S rRNA primers producing unexpected bands. Target cDNAs were amplified by PCR using the following conditions: (1) an initial 4-min incubation at 94°C, (2) 35 cycles of denaturation (1 min at 94°C), annealing (2 min at 57°C) and extension (2 min at 72°C) and (3) incubation at 72°C for 7 min. Thirty-five cycles were determined experimentally as optimal for both cPLA2 and ~-actin conditions. The negative control contained water in place of RT product. Primers used in amplification were designed from published chicken cPLA2 and mouse p-actin sequences (Table 2). Primer pairs were synthesized by the Oregon state University Center for Gene Research and Biotechnology Central services Laboratory. PCR products were resolved on 2% (w/v) and 3% (w/v) agarose gels containing 0.5 ~g/ml ethidium bromide for cPLA2 and actin and for cPLA2 and 18S rRNA, respectively. Table 2 Primer name PCR primer sequences for cPLA2 and p-actin. Primer sequence PCR fragment size (bp) PCR fragment position 5' primer= 352 175-526 of chicken cDNA Reference l Nalefske et al. (1994) CCTTATCAACACATTGTGGTGG (22 nt) 3' primer= TTAACTGGACCTCCTTCTTCTCTC (24 nt) ~-actin 243 5' primer= CGTGGGCCCTAGGCACCA (18nt) 3' primer= TTGGCCTTAGGGTTCAGGGGGG 1 (22nt) See Reference section for full citation 181-424 of mouse cDNA Tokunaga et al. (1986) 23 Gels were photographed with a MP-40 Polaroid Land camera and positive/negative film (Polaroid 665). was exposed under UV light for 90 s. Film Negatives were processed according to the product insert. The negative was soaked for 30 to 60 s in a sodium sulfite clearing solution followed by a wash under cold running water for 5 min. The negative was then dipped in 2% (v/v) PhotoFlo and air dried. The intensity and area of each amplified signal or band on the photographic negative was computed by scanning and computing densitometry (Hoefer GS-300 Scanning Densitometer and GS-350h Data System). cPLA2 amounts were expressed relative to actin or 18S rRNA, and ~-actin ~- amounts were expressed relative to 18S rRNA. Linearity of the relationship between densitometric area and ng of DNA was validated using correlation regression analysis. Densitometric areas were plotted against four concentrations of DNA for DNA sizes of 100, 200, 500, 700, and 1,000 base pairs (bp) (Mass Ruler, Bio-Rad Laboratories, Hercules, CAl. Correlation coefficients for densitometric area by DNA bp size and densitometric area by concentration of DNA were greater than r = 0.94 for areas ranging from 400-6800 relative densitometric units. 24 PCR products of cPLA2 and ~-actin were extracted using the QIA quick1M PCR Purification Kit (Quiagen, Valencia, CA) as per the manufacturer's instructions. Extracted PCR products were analyzed for purity and concentration by UV-spectrophotometry, and sequenced at the Oregon state University center for Gene Research and Biotechnology Central Services Laboratory. cPLA2 and actin expression in testes was evaluated by one-way ANOVA where phenotype was the major effect. All analyses were performed using the NCSS statistical software program (Number Cruncher, Version 2000). ~­ 25 RESULTS RT-PCR amplified a 352 bp nucleotide fragment for cPLA2. Comparison of the chicken cPLA2 fragment to published sequences showed sequence similarity of 100%, 77.3% and 76.9% for chicken, human and mouse cDNA, respectively (FASTA search; Pearson and Lipman, 1988). Testicular cPLA2 mRNA expression was compared against ~­ actin expression between high and low sperm mobility phenotypes using full-sib roosters (n=3 roosters per phenotype) in a preliminary experiment. Four different RT-PCR were performed to analyze expression levels (Figure 1). The average cPLA2 : ~-actin ratio in the high sperm mobility phenotype was 0.63 ± 0.260 (mean ± SEM; Table 3). This value was approximately twofold greater than the average cPLA2 : ~-actin ratio from the low sperm mobility phenotype, which was 0.32 ± 0.123 (P < 0.05). The same six males were used to compare the cPLA2 expression relative to 18S rRNA (Ambion, Austin, TX) levels in four replicate multiplex RT-PCR experiments (Figure 2). The average cPLA2 : 18S ratio for high sperm mobility was 0.74 ± 0.158, and the average for low sperm mobility was 0.38 ± 0.135 (Table 3). Once again the average cPLA2 expression within testes of high sperm 26 Figure 1 Testicular ~-actin and cPLA 2 expression in roosters with high or low sperm mobility phenotypes . Lanes 1 - 7 are ~-actin, and lanes 9- 15 are cPLA 2 • Lanes 1 and 9 are the negative controls. Lane 8 is the DNA ladder. Lanes 2,4,5,10,12, and 13 represent low sperm mobility phenotypes, and lanes 3, 6, 7, 11 , 14, and 15 represent high sperm mobility phenotypes. 234 5 6 7 8 9 10 11 12 13 14 15 __ 352 bp -243 bp Figure 2 Testicular cPLA2 and 18S rRNA expression in roosters with high or low sperm mobility phenotypes. The top bands are cPLA 2 and the bottom bands are 18S rRNA. Lane 1 is the DNA ladder. Lane 2 is the negative control. Lanes 4 , 7, and 8 represent low sperm mobility phenotypes, and lanes 3, 5 and 6 represent high sperm mobility phenotypes . 2 4 5 6 7 8 /352 bp -324 bp Table 3 cPLA2 mRNA expression between sets of full-sib roosters representing two sperm mobility phenotypes. Sperm mobility phenotypes Roosters per phenotype (n) Low 3 0.32 ± 0.123 A 0.38 ± 0.135 C 0.56 ± 0.151 High 3 0.63 ± 0.260 B 0.74 ± 0.158 0 0.59 ± 0.0949 p-actin AB means within a column differ (P < 0.05). co means within a column differ (P < 0.0057). 18S p-actin 18S 28 mobility roosters was approximately twofold greater compared to that observed with the low sperm mobility phenotype (P < 0.0057). ~-actin expression relative to 18S rRNA was evaluated between high and low sperm mobility phenotypes (n=3 full-sibs per phenotype) in four replicate single primer RT-PCR experiments (Figure 3). significant difference in ~-actin There was no expression between high and low phenotypes (P > 0.63; Table 3). In a subsequent experiment, 12 additional males (half-sib roosters; n=6 per phenotype) were used to further compare CPLA2 expression in high and low sperm mobility phenotypes relative to 18S rRNA in three replicate multiplex RT-PCR experiments. Ratios were 0.74 ± 0.141 and 0.49 ± 0.104 for the high and low phenotypes, respectively. comparable to the previous experiment, there was a significant difference in cPLA2 expression between high and low sperm mobility phenotypes (P < 0.023). Based upon pooled data, i.e. 9 males per phenotype, cPLA2 was expressed to a greater extent within testes of roosters from the high sperm mobility phenotype (P < 0.00022). sequence analysis failed to detect any differences in the cPLA2 nucleotide sequence (nt 175-526) between high and low sperm mobility phenotypes. 29 Figure 3 Testicular p-actin and 18S rRNA expression in roosters with high or low sperm mobility phenotypes . Lanes 1-7 are p-actin, and lanes 9-15 are 18S rRNA . Lanes 1 and 9 are the negative controls. Lane 8 is the DNA ladder. Lanes 2, 4, 5 , 10, 12 and 13 represent low sperm mobility phenotypes, and lanes 3, 6, 7, 11, 14, 15 represent high sperm mobility phenotypes. 2 3 4 5 6 7 8 9 10 11 12 13 14 15 324 bp 243 bp 30 Table 4 cPLA2 mRNA expression between sets of half-sib roosters representing two sperm mobility phenotypes. Sperm mobility phenotypes Roosters per phenotype (n) cPLA2 : 18S Low 6 0.49 ± 0.104 A High 6 0.74 AB ± 0.141 B means within a column differed (P < 0.00022). 31 DISCUSSION The primary objective of this research was to compare the levels of cPLA2 mRNA between high and low sperm mobility phenotypes. The secondary objective was to compare nucleotide sequences from a region containing the calcium binding domain. Previous experiments had shown that extracellular ca 2+ was essential for maintenance of fowl sperm motility at body temperature (Froman, unpublished data). Likewise, sperm from high sperm mobility males exhibited higher ATP content and oxygen consumption compared to sperm from average sperm mobility males (Froman and Feltmann, 1998; Froman et al., 1999). In this regard, it was noteworthy that sperm were found to contain long-chain acyl carnitine (Froman et al., 1999), and arachidonyltrifluoromethyl ketone (a PLA2 inhibitor) arrested motility within minutes (Froman, unpublished data). Moreover, ca 2+ is known to modulate PLA2 activity. Thus, PLA2 activity seemed to be critical for the maintenance of motility at body temperature. Roosters differ in the extent to which their sperm are motile, and as a consequence, roosters differ with respect to sperm mobility, i.e. the extent to which a population of sperm move. cPLA2 is the one type of PLA2 known to be transcriptionally regulated (Miguel et al., 1999). Therefore, the 32 following argument was made: if a difference in cPLA2 expression could be observed between sperm mobility phenotypes, then the gene encoding cPLA2 may influence the expression of sperm mobility phenotype. The hypothesis was tested using RT-PCR. Expression of p-actin and 18S rRNA were used as internal standards. RT-PCR is considered to be a sensitive and powerful tool for analyzing gene expression (Freeman et al., 1999). p-actin was one of the first RNAs to be used as an internal control because it is considered to reflect the expression of a house-keeping gene. Typically, p-actin mRNA is expressed at moderately abundant levels. However, the use of p-actin mRNA as an internal control has been questioned recently because expression levels have been shown to vary in some tissues (Ambion technical bulletin 151). In order to eliminate the possibility of anomalous p-actin expression and to test whether p-actin expression was comparable between high and low sperm mobility phenotypes, an 18S rRNA internal standard was used. rRNAs are continually expressed at constant rates even under conditions where mRNA transcription is altered because rRNAs are transcribed by a distinct polymerase (Ambion technical bulletin 151). Ambion's Competimer technology attenuates 18S rRNA amplification 33 at different levels depending on the expression level of the researcher's gene of interest. This attenuation allows the accumulation and detection of both 18S rRNA and target mRNA at the same time. The QuantumRNA™ 18S Internal Standards Kit provides an effective method to perform relative quantitative RT-PCR. This method still does not eliminate the possibilities of tube-to-tube variations in RT-PCR efficiencies, thus it cannot be used as an absolute quantitative RT-PCR (Death et al., 1999). For the absolute quantitative RT-PCR, homologous synthetic external RNA standards are used to eliminate the possibility of tube-to-tube variations in RT-PCR reactions by allowing primers and enzymes to compete (Death et al., 1999). Yanagisawa (1967) associated sperm motility with intracellular ATP and creatine phosphate in sea urchin sperm. Subsequently, Mohri (1976) suggested that there was an ATP transporting system using creatine phosphate for the dynein ATPase, which is involved in the flagellar movement of the sperm axoneme. Mita and Ueta (1988) showed decreased phosphatidylcholine (PC) content after sea urchin sperm were activated by dilution with sea water, leading to the conclusion that PC was an endogenous sUbstrate. Later, Mita and Ueta (1990) attributed PC hydrolysis to PLA2. Thus, PLA2 was proposed to be a key enzyme involved with energy production in sea urchin sperm. Based upon the role of PLA2 in sea urchin sperm and the effect of a specific PLA2 inhibitor on fowl sperm motility, it seemed plausible that PLA2 was critical to energy production in fowl sperm. Therefore, it was postulated that a higher expression level of cPLA2 mRNA might account for phenotypic differences in sperm mobility. The high sperm mobility phenotype showed greater expression of cPLA2 mRNA relative to both ~-actin mRNA and 18S rRNA internal standards than the low mobility phenotype. Moreover, ~-actin was shown to be expressed at comparable levels between high and low sperm mobility phenotypes. Furthermore, there were no differences in the nucleotide sequences that span the calcium binding domain between high and low sperm mobility phenotypes. Therefore, these experiments demonstrated that testes of high sperm mobility males expressed more cPLA2 than did their low mobility counterparts. While the basis for this difference is unknown, it would help explain phenotypic differences if varying amounts of PLA2 were found in sperm from different males in a population. Whether or not high sperm mobility phenotypes have higher cPLA2 activity needs to be examined. - Likewise, there may be some transcription factors that are responsible for transcribing message at different rates. 35 Ets-2 is responsible for up-regulation of the PLA2 activating protein (PLAA) gene in mice and humans (Beatty et al., 1999). PLAA activates sPLA2 activity. There may be a similar pathway for cPLA2. Therefore, discovering the transcriptional control responsible for up-regulating cPLA2 mRNA may be critical to further understand the genetic difference between these phenotypes. 36 REFERENCES Ackerman EA, and Dennis EA. Mammalian calcium­ independent phospholipase A2. Biochem Biophys Acta. 1995; 1259:125-136. Allen TE, and Grigg GW. Australian J Agric Res. Sperm transport in the fowl. 1957; 8:788-799. Ambion Technical Bulletin 151. Use of internal and external standards or reference RNAs for accurate quantitation of RNA levels. Ambion TechNotes Newsletter. 2000; 6(5):13. Arenas MI, Bethencourt FR, De Miguel MP, Fraile B, Romo E, and Paniagua R. Immunocytochemical and quantitative study of actin, desmin and vimentin in the peritubular cells of the testes from elderly men. J Reprod Fertil. 1997; 110:183-193. Arcellana-Panlilio MY, and Schultz GA. Analysis of messenger RNA. In: Guide to Techniques in Mouse Development. Methods of Enzymology (Eds. Wassarman PM, Depamphilis ML), New York: Academic Press. 1993; 225:303-328. Ashizawa K, and Sano R. Effects of temperature on the immobilization and the initiation of motility of spermatozoa in the male reproductive tract of the domestic fowl, Gallus domesticus. Comp Biochem Physiol. 1990; 96A:297-301. Bakst MR, Wishart G, and Brillard J-P. Oviducal sperm selection, transport, and storage in poultry. poultry Sci Rev. 1994; 5:117-143. Balboa MA, Balsinde J, Winstead MV, Tischfield JA, and Dennis EA. Novel group V phospholipase A2. J BioI Chem. 1996; 271:32381-32384. Balsinde J, Balboa MA, and Dennis EA. Functional coupling between secretory phospholipase A2 and cyclooxygenase-2 and its regulation by cytosolic group IV phospholipase A2. Proc Natl Acad Sci USA. 1998; 95:7951-7956. Balsinde J, and Dennis EA. Distinct roles in signal transduction for each of the phospholipase A2 enzymes present in P388D macrophages. J BioI Chem. 1996; 271:6758-6765. 37 Balsinde J, and Dennis EA. Function and inhibition of intracellular calcium-independent phospholipase A2. J BioI chem. 1997; 272:16069-16072. Balsinde J, Bianco ID, Ackermann EJ, Conde-Frieboes K, and Dennis EA. Inhibition of calcium-independent phospholipase A2 prevents arachidonic acid incorporation and phospholipid remodeling in P388D1 macrophages. Proc Natl Acad Sci USA. 1995; 92:8527-8531. Balsinde J, Maria A, Balboa PA, Dennis I, and Dennis EA. Regulation and Inhibition of phospholipase A2. Annu Rev Pharmacol Toxicol. 1999; 39:175-189. Bartoli F, Lin HI, Ghomashchi F, Gelb MH, Jain MK, and Apitz-Castro R. Tight binding inhibitors of 85-kDa phospholipase A2, but not 14-kDa phospholipase A2 inhibit release of free arachidonate in thrombin stimulated human platelets. J BioI Chem. 1994; 269:15625-15630. Beatty BG, Qi S, Pienkowska M, Herbrick J, Scheidl T, Zhang ZM, Kola I, Scherer SW, and Seth A. Chromosomal localization of phospholipase A2 activating protein, an Ets2 target gene, to 9p21. Gen. 1999; 62:529-532. Birkhead TR, Martinez JG, Burke T and Froman OP. Sperm mobility determines the outcome of sperm competition in the domestic fowl. Proc R Soc Lond B. 1999; 266:1759­ 1764. Borsch-Haubold AG. Regulation of cytosolic PLA2 by phosphorylation. Biochem Soc Trans. 1998; 26:350-354. Chen J, Engle SJ, Seilhamer JJ, and Tischfield JA. Cloning and recombinant expression of a novel human low molecular weight Ca+ dependent phospholipase A2. J BioI Chem. 1994; 269:2365-2368. chomczynski P, and Sacchi N. single step method of RNA isolation by guanidinium thiocyanate-phenol-chloroform extraction. Anal Biochem. 1987; 162:156-159. Clark JO, Schievella AR, Nalefski EA, and Lin LL. Cytosolic phospholipase A2. J Lipid Mediat. Cell signal. 1995; 12:83-117. Cupillard L, Koumanov K, Mattei MG, Lazdunski M, and Lambeau G. Cloning, chromosomal mapping, and expression of a novel human secretory phospholipase A2' J BioI Chem. 1997; 272:15745-15752. 38 Death AK, Yue DK, and Turtle JR. Competitive RT-PCR for measuring metalloproteinase gene expression in human mesangial cells exposed to a hyperglycemic environment. BioTechniques. 1999; 27:512-520. Dennis EA. Diversity of group types, regulation, and function of phospholipase A2. J BioI Chem. 1994; 269:13057-13060. Dennis EA. The growing phospholipase A2 superfamily of signal transduction enzymes. Trends Biochem Sci. 1997; 22:1-2. Dessen A. Phospholipase A2 enzymes: structural diversity in lipid messenger metabolism. Structure. 2000; 8:R15-22. Dessen A, Tang J, Schmidt JTH, Stahl M, Clark JD, Seehra J, and Somers WS. Cell. 1999; 97:439-360. Freeman WM, Walker SJ, and Vrana KE. Quantitative RT­ PCR: pitfalls and potential. BioTechniques. 1999; 26:112-125. Froman DP., personal communication, July 21, 2000. Froman DP, and Feltmann AJ. Sperm mobility: a quantitative trait of the domestic fowl (Gallus domesticus). BioI Reprod. 1998; 58:379-384. Froman DP, and Feltmann AJ. Sperm mobility: phenotype in roosters (Gallus domesticus) determined by concentration of motile sperm and straight line velocity. BioI Reprod. 2000; 62:303-309. Froman DP, Feltmann AJ, Rhoads ML, and Kirby JD. Sperm mobility: a primary determinant of fertility in the domestic fowl (Gallus domesticus). BioI Reprod. 1999; 61:400-405. Kramer RM, Robers EF, Um SL, Borsch-Haubold AG, Watson SP, Fisher MJ, and Jakubowski JA. P38 mitogen-activated protein kinase phosphorylates cytosolic phospholipase A2 (CPLA2) I thrombin-stimulated platelets. J BioI Chem. 1996; 271:27723-27729. Kramer RM, Roberts EF, Manetta J, and Putnam JE. The Ca 2+-sensitive cytosolic phospholipase A2 is a 100-kDa protein in human monoblast U937cells. J BioI Chem. 1991; 266:5268-5272. 39 Leslie CC. Properties and regulation of cytosolic phospholipase A2. J BioI Chem. 1997; 272:16709-16712. Lin LL, Lin AY, and DeWitt DL. Interleukin-1a induces the accumulation of cytosolic phospholipase A2 and the release of prostaglandin E2 in human fibroblasts. J Biol Chem. 1992; 267:23451-23454. Miguel A, Leslie G, and Leslie CC. Regulation of arachidonic acid release and cytosolic phospholipase A2 activation. J Leukoc BioI. 1999; 65:330-336. Mita M, and Ueta N. Energy metabolism of sea urchin spermatozoa, with phosphatidylcholine as the preferred substrate. Biochem Biophys Acta. 1988; 959:361-369. Mita M, and Ueta N. Phosphatidylcholine metabolism for energy production in sea urchin spermatozoa. Biochem Biophys Acta. 1990; 1047:175-179. Mohri H. Tubulin-dynein system in cell motility I. Zool Mag. 1976; 85:1-16. Mosior M, six DA, and Dennis EA. Group IV cytosolic phospholipase A2 binds with high affinity and specificity to phosphatidylinositol 4,5 bisphosphase resulting in dramatic increases in activity. J BioI Chem. 1998; 273:2184-2191. Murakami M, Shimbara S, Kambe T, Kuwata H, Winstead MV, Tischfield JA, and Kudo I. The function of five distinct mammalian phospholipases A2 in regulating arachidonic acid release. J BioI Chem. 1998; 273:14411-14423. Nalefski EA, Sultzman LA, Martin DM, Kriz RW, Towler PS, Knopf JL, and Clark JD. Delineation of two functionally distinct domains of cytosolic phospholipase A2, a re~ulatory ca2+-dependent lipid-binding domain and a Ca +-independent catalytic domain. J BioI Chem. 1994; 269:18239-18249. Okamura F, and Nishiyama H. The passage of spermatozoa through the vitelline membrane in the domestic fowl, Gallus gallus. Cell Tiss Res. 1978; 188:497-508. Pickard RT, Chiou XG, Strifler BA, DeFelippis MR, Hyslop PA, Tebbe AL, Yee YK, Reynolds LJ, Dennis EA, Kramer RM, and Sharp JD. Identification of essential residues for the catalytic function of 85-kDa cytosolic phospholipase A2. J BioI Chem. 1996; 271:19225-19231. 40 Pizzari and Froman DP., personal communication, February 21, 2000. Qui ZH, Gijon MA, de Carvalho MS, Spencer OM, and Leslie CC. The role of calcium and phosphorylation of cytosolic phospholipase A2 in regulating arachidonic acid release in macrophages. J BioI Chem. 1998; 273:8203-8211. Reynolds LJ, Hughes LL, Louis AI, Kramer RM, and Dennis EA. Metal ion and salt effects on the phospholipase A2, lysophospholipase and transacylase activities of human cytosolic PLA2' Biochim Biophys Acta. 1993; 1167:272­ 280 Schievella AR, Regier MK, smith WL, and Lin LL. Calcium-mediated translocation of cytosolic phospholipase A2 to the nuclear envelope and endoplasmic reticulum. J BioI Chem. 1995; 270:30749-30754. Syrbu SI, Waterman WH, Molski TFP, Nagarkatti 0, Hajjar JJ, and Sha'afi, RI. Phosphorylation of cytosolic phospholipase A2 and the release of arachidonic acid in human neutrophils. J Immunol. 1999; 162:2334-2340. Tang J, Kriz RW, Wolfman N, Shaffer M, Seehra J, and Jones SSe A novel cytosolic calcium-independent phospholipase A2 contains eight ankyrin motifs. J BioI Chem. 1997; 272:8567-8575. Tokunaga K, Taniguchi H, Yoda K, Shimizu M, and Sakiyama S. Nucleotide sequence of a full-length cDNA for mouse cytoskeletal p-actin mRNA. Nucl Acids Res. 1986; 14:2829. Vadas P, Browining J, Edelson J, and Pruzanski W. Extracellular phospholipase A2 expression and inflammation: the relationship with associated disease states. J Lipid Mediators. 1993; 8:1-30. 41 APPENDIX 42 APPENDIX The acid guanidinium - phenol - choloroform method (Chomczynski and Sacchi, 1987), was used to extract RNA from chicken testis and liver with a slight modification. Once excised, tissue samples were placed within 1.6 ml microcentrifuge tubes and immediately frozen in a dry ice / ethanol bath. After partial thawing, each tissue was cut into pieces approximately 5mm3 in size, and these smaller pieces were placed into a sterile tube (12 x 75 mm) containing 1 ml of the denaturing solution (Solution D) containing 250 g guanidinium thiocyanate (Ambion, Austin, TX), 293 ml distilled water (dH20), 1.76 ml of 0.75 N sodium citrate, 26.4 ml 10% N-lauryl sarcosine (Sigma, st. Louis, MO) and 0.36 ml p-mercaptoethanol (Sigma). Tissues were homogenized with a hand-held homogenizer (TissueoTearor™ Model 985-370; Biospec Products, Bartlesville, OK). The homogenizer was rinsed thoroughly after each homogenation. Each homogenate was transferred to a 17 x 100 mm sterile polypropylene tube. RNA extraction was carried out by sequentially adding 100 ~l 2 M sodium acetate (pH 4), 1 ml water-saturated phenol (pH 4.5; Ambion), and 200 alcohol mixture (49:1). ~l chloroform: isoamyl The homogenate was vortexed, 43 and then placed on ice for 15 minutes. The chilled mixture was centrifuged at 10,000 x g for 20 min at room temperature to generate 3 layers. The aqueous supernatant contained RNA, whereas the middle and bottom layers contained protein and DNA, respectively. The aqueous phase was removed, placed in a 1.6 ml sterile microcentrifuge tube, and followed by another centrifugation at 14,000 x g for 5 min to sediment residual protein and DNA. RNA precipitation from testicular tissue was carried out by adding 1 ml isopropanol to the second aqueous layer from each microcentrifuge tube. Precipitation of RNA from liver, because of the high glycogen content, was performed by adding 3 ml of 4M sodium acetate (pH 7). Tubes were stored overnight at -20°C and centrifuged at 14,000 x g for 20 min at room temperature. resuspended in 300 with 300 ~l ~l Each RNA pellet was Solution D and re-precipitated isopropanol. Re-precipitated RNA was stored at -20°C for 2 - 3 h and centrifuged at 14,000 x g for 10 min at room temperature. Each supernatant was carefully aspirated with filtered tips (USA Scientific, Ocala, FL) attached to a P-200 Pipetman (Rainin, Emeryville, CAl. Each pellet was washed with 500 ice-cold ethanol and centrifuged for 2 min. ~l 75% The wash with ice-cold ethanol was repeated, and the precipitate 44 was dried for 2 h at room temperature. Each RNA pellet was analyzed for moisture content with a microscope (20 x). Each pellet was then solubilized in 50 ~l of autoclaved distilled water by heating for 10 min at 65°C. RNA was quantified and evaluated for purity using UV-spectrophotometry. The ratio of two wavelengths 260 nm (RNA) and 280 nm (protein), was used for estimating purity and absorbance at 260 nm was used to determine RNA concentration.