AN ABSTRACT OF THE THESIS OF Lie-Fen Lin for the degree of Doctor of Philoso1Dh' in Statistics presented on March 17, 1992. Title: Uses of Bayesian Posterior Modes in Solving Complex Estimation Problems in Statistics Redacted for Privacy r ,--7,1 Abstract approved: msey Fred L. means are commonly used to In Bayesian analysis, summarize Bayesian posterior distributions. a number large of parameters Problems with often require numerical In this integrations over many dimensions to obtain means. dissertation, posterior modes with respect to appropriate are measures used to summarize Bayesian posterior distributions, using the Newton-Raphson method to locate modes. Further inference of modes relies on the normal approximation, using asymptotic multivariate normal distributions to approximate posterior distributions. These techniques are applied to two statistical estimation problems. First, Bayesian sequential dose selection procedures are developed for Bioassay problems using Ramsey's prior [28]. Two adaptive designs for Bayesian sequential dose selection and estimation of the potency curve are given. The relative efficiency is used to compare the adaptive methods with other non-Bayesian methods (Spearman-Karber, up-and-down, and Robbins-Monro) for estimating the ED50 . Second, posterior distributions of the order of an autoregressive (AR) model are determined following Robb's method (1980). Wolfer's sunspot data is used as an example to compare the estimating results with FPE, AIC, BIC, and CIC Both methods. approximation for posterior results. Robb's estimation method of the and order the have normal full Uses of Bayesian Posterior Modes in Solving Complex Estimation Problems in Statistics by Lie-Fen Lin A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy Completed March 17, 1992 Commencement June 1992 APPROVED: it z Redacted tor Privacy Professor of Statist' in charg ajor Redacted for Privacy Head of Department of Statisti Redacted for Privacy Dean of Graduate/ school Date thesis is presented Typed by Pao-Pao Liu for March 17. 1992 Lie-Fen Lin ACKNOWLEDGEMENTS I would like to express my most sincere gratitude to Dr. Fred L. Ramsey, my major professor and thesis advisor, for his guidance, encouragement and patience during the course of this work. His direct contributions helped in the completion of the thesis. I also want to thank Dan Brunk, who provided help with endless patience in the beginning of doing this thesis. During my Ph.D. study, many of my friends helped me in different ways. I especially wish to express my special thanks to Mr. So's family, they took care of my son and loved him so much during my research. I would like to thank Jane, who have helped me more than she knows. Financial support from the department is gratefully acknowledged. I am also indebted to my husband, Pao-Pao, my children Eddy and Sandra, for giving me warm and bearing up under the strain. Finally, parents. Their I want to dedicate this work to my love, support and understanding have sustained me through all these years. TABLE OF CONTENTS 1 2 3 4 INTRODUCTION 1.1 Introduction 1.2 The Normal Approximation to a Posterior Distribution 1.2.1 Introduction of the Normal Approximation 1.2.2 Bayesian Normal Approximation 1.2.3 Examples 1.3 Literature Review of the Bayesian Bioassay 1.4 Review of Autoregressive (AR) Time Series 1.5 Organization of the Dissertation MOST PROBABLE VALUES (MPV) ESTIMATORS OF THE POTENCIES IN BAYESIAN BIOASSAY 2.1 Model of Bayesian Bioassay 2.2 Modes of the Posterior Distribution 2.3 Point Estimator of an Effective Dose 2.4 Bayesian MPV Estimators Inference 2.4.1 Prior and Posterior Distributions of an Effective Dose 2.4.2 Normal Approximation Method for the Bayesian MPV Estimators Inference ADAPTIVE DESIGNS FOR ESTIMATING THE POTENCY CURVE 3.1 Adaptive Designs 3.2 Designs for the Adaptive Methods 3.3 One-step (Non-adaptive) Method 3.3.1 Comparisons of Non-adaptive Method with Adaptive Methods 3.4 Sperman-nrber (Non-parametric) Method 3.4.1 Comparisons of Spearman - Karber Method with Adaptive Methods 3.5 Up-and-down (Staircase) Method 3.5.1 Comparisons of Up-and-down Method with Adaptive Methods 3.6 Robbins-Monro Process 3.6.1 Comparisons of Robbins-Monro Process with Adaptive Methods 3.7 Comparisons NORMAL APPROXIMATION METHOD TO ESTIMATE THE ORDER OF THE AUTOREGRESSIVE (AR) MODEL UNDER BAYESIAN POINT OF VIEW 4.1 The Bayesian Approach to Order Estimation of AR Process 4.2 Normal Approximation Approach 4.3 Examples for Wolfer's Sunspot Data 1 1 3 3 4 8 12 15 20 21 21 24 28 30 30 31 34 34 45 47 50 50 52 52 56 56 61 61 70 70 73 78 5 CONCLUSIONS 85 BIBLIOGRAPHY 88 APPENDIX 92 LIST OF FIGURES Fi 1.1 3.1 3.2 3.3 Page The density functions of Beta(3, 11), N(3/14, .03665), N(2/12, .01736), and N(3/14, .0098) 39 Determination of x2,1 for s1 step 40 1 =1 in the first Determination of x30 for s1,1=0, s2,1=0 in the 42 Determination of x3,1 for s1,1=1, s2,1=0 in the second step 3.6 41 Determination of x3,1 for s1,1=0, s2,1=1 in the second step 3.5 6 Determination of x2,1 for s1,1=0 in the first step second step 3.4 ... 42 Determination of x3,1 for s1,1=1, s2,1=1 in the second step 43 3.7 The r.e. of Anm/A16, m=1,2,3, L=6 48 3.8 The r.e. of Bnm/B16, m=1,2,3, L=6 48 3.9 The r.e. of Anm/A112, m=1,2,3,4,6, L=12 49 3.10 The r.e. of Bnm/B112, m=1,2,3,4,6, L=12 49 3.11 The r.e. of NOnm/N016, m=1,2,3, L=6 51 3.12 The r.e. of B61/N061, A32/N016, A23/N016 51 3.13 The mse of SKNn, n=2,3,6 53 3.14 The r.e. of B61/SKN6, A32/SKN3, A23/SKN2 53 3.15 The mse of UDq, q=001, 035, 075 55 3.16 The r.e. of B61/UD035, B61/UD075 55 3.17 The r.e. of A32/UD035, A32/UD075 57 3.18 The r.e. of A23/UD035, A23/UD075 57 3.19 The mse of RM1Cc, c=.001, .2, .408 59 3.20 The mse of RM2Cc, c=.001, .25, 3.21 The mse of RM3Cc, c=.001, .333, 3.22 The mse of RM6Cc, c=.001, .5, 1 .5454 59 .667 60 60 3.23 The r.e. of B61/RM6Cc, c=.5, 1 62 3.24 The r.e. of A32/RM3Cc, c=.333, .667 62 3.25 The r.e. of A23/RM2Cc, c=.25, .5454 63 3.26 The r.e. of B61/RM1C2, Anm/RM6C10, Anm/RM1C4, m=2,3, L=6 63 3.27 The r.e. of B61/N016 65 3.28 The r.e. of N061/N016 65 3.29 The r.e. of SKN6/N016 65 3.30 The r.e. of UD035/N016 65 3.31 The r.e. of RM1C2/N016 65 3.32 The r.e. of XX/N016, XX=B61, N061, SKN6, UD035, RM1C2 66 3.33 The r.e. of Anm/N016, m=2,3, L=6 67 3.34 The r.e. of SKN2/N016 67 3.35 The r.e. of RM6C10/N016, RM1C4/N016 67 3.36 The r.e. of UD075/N016 67 3.37 The r.e. of XX/N016, XX=A32, A23, SKN2, UD075, RM6C10, RM1C4 68 4.1 Mean corrected of the square root of yearly averages of sunspots data 1749-1977 84 LIST OF TABLES Table 2.1 Page The values of (g1(r(Py ,RP2)), g2(go1) and (H1, H2) for n1 =n2=1 and fi=1,2 2.2 god )) 29 The values of (g1 (rpo,t(P2)), g2 (rpo,r(p2))) and (H1, H2) for n1 =n2=2 and 13=1,2 29 The estimated ED50 from means and modes for n =n 2=2 and /3=1 and 2 31 3.1 The best designs for the adaptive methods (L=6) 47 3.2 The best designs for the adaptive methods (L=12) 47 3.3 The values of c for ni=6, 3, 2, and 1 such that all the tested doses and ED50 are in [0,1] 58 The results of analyzing Wolfer's sunspot data for 1749-1924 using FPE, AIC, BIC, CIC, Robb, and normal approximation method for the order p 81 The results of analyzing Wolfer's sunspot data for 1749-1924 from the closed Newton-Cotes (N=3) and Bayesian normal approximation method for choosing the maximum order M=12 82 The results of analyzing Wolfer's sunspot data for 1749-1977 using FPE, AIC, BIC, CIC, and normal approximation method for the order p assumed the maximum order M=15 83 2.3 1 4.1 4.2 4.3 Uses of Bayesian Posterior Modes in Solving Complex Estimation Problems in Statistics 1 INTRODUCTION 1.1 Introduction In Bayesian analysis, means are commonly used to summarize Bayesian posterior distributions. For problems with a large numbers of parameters often require numerical integrations over many dimensions to obtain means. In this dissertation, posterior modes with respect to appropriate measures are used to summarize Bayesian posterior distributions, using the Newton-Raphson method to locate Further modes. approximation, inference using of modes asymptotic relies on multivariate normal normal distributions to approximate posterior distributions. These techniques are applied to two statistical problems. These are the sequential dose selection in bioassay and the selection of the order of an autoregressive (AR) time series process. In a standard bioassay problem, the experimenter attempts to test the potency of a stimulus administered at different levels to different subjects. He chooses M dosage levels, xl and treats nl levels, respectively. subjects at these Each subject has a response to a given dose of drug, either positive (response) or negative (no response). The experimenter observes the number of 2 positive responses and records them as si,...,sm. It is assumed that each subject has a threshold which the given dose must equal or exceed to produce a positive response. However, this threshold may vary from one subject to the next, and so is treated as a random variable with unknown distribution P P. is often distribution or potency curve. called the tolerance P(x) is the potency of level x of the stimulus; that is, the tolerance distribution is defined by the probability P(x) of getting a positive response to a dosage at level x for all x. The drug dosage levels may be the actual dosage levels or the logarithms of these levels. For Bayesian bioassay, Ramsey (1972) employed Ramsey prior and [28] posterior modes developed methods of for estimating the posterior density estimate the potencies, Pi's. the function to Thus, potency curve can be observed by linear interpolation. Two adaptive designs for sequentially selecting dose from the estimated potency curve are developed using posterior modes to estimate the potency curve in Chapter 3. Robb (1980) derived the marginal posterior density function of the order of AR model for estimating the order, which requires numerical integrations over many dimensions to obtain the order. The normal approximation, using multivariate normal density function, will be used to get around this problem in Chapter 4. 3 1.2 The Normal Approximation to a Posterior Distribution 1.2.1 Introduction of the Normal Approximation Let y =(y1, f(yi 8). ..,yn) be a random sample from a distribution When the distribution obeys certain regularity conditions, the likelihood function of 0 is approximately normal and remains approximately normal under mild one-toone transformations of 0 for sufficiently large n (Johnson 1967, 1970). In this case, the logarithm of the likelihood is approximately quadratic, i.e., L(81Y) " (emlY) (0 a211 ) Om) 2 ae 2 le where Om is the maximum likelihood estimator (mle) of 0. In general, the quantity 1.82L)L. n a82 mm (1.2) is a positive function of y. The logarithm of a normal density function r(x) is of the form logr (x) given and, =constant the 1 (x- 2 ) 2 2 location parameter determined by its standard deviation a. and (1.3) shows that (1.3) a the standard A, is completely Comparison of (1.1) deviation of the likelihood curve is approximately equal to n 1 a2LI-i n (302 -m (1.4) The likelihood function of 0 is approximately a normal density with mean em and variance 4 VM = (- ) a2L1 ae2 le (1.5) The approximated distribution of 0 can thus be written as N(014, -14 ) 1 le) (1.6) 1.2.2 Bayesian Normal Approximation In Bayesian analysis, deriving the means and variances (or covariances) from the posterior distribution of the parameters is often problematic. In this dissertation, a normal approximation to the posterior distribution, similar to that just displayed for the likelihood function, is developed and illustrated with examples. Example 1.1 Let X be Binomial(10, p). distribution is Beta(2, 2). The prior Thus the posterior distribution is Beta(x+2, n+2-x) with density (pix) pl+X (1 .1)) n+1-x w. r. t. dv where dv is a Lebesgue measure. (1.7) Suppose x=1; the posterior distribution is Beta(3, 11) with mean=3/14, variance=.01123, and mode of this density is 2/12. Use an asymptotic normal distribution to approximate the posterior distribution, which is P N(P*, aa loge IP*) ape If p*=mean, p ~N(3/14, .03655). .01736). (1.8) If p*=mode, p ~N(2/12, The approximate variance evaluated at the mean is 5 much larger than the true posterior variance comparing with that at the mode. For a skewed distribution the second derivative at the mode is more meaningful than the mean because the second derivative at the mean is sometimes small or close to zero such that the variance is overestimated. Therefore using modes meaningful is for a skewed distribution. In the next example, the posterior density with respect to other measure will be displayed to see how the normal approximation will be changed. Example 1.2 (continuation of example 1.1) The posterior density function of Beta(x+2, n+2-x) can be written as « p2+X (i_p) n+2-x (pix) dv p(1-p) w.r.t. dv- where dv° is an improper measure. (1.9) The modes of above density is 3/14, which is the same as the posterior mean, and the approximate variance is Posterior .0098. distribution of p can be approximated by N(3/14, .0098) when x=1. A plot of the posterior distribution Beta(3,11) and above three normal distributions are shown in Fig. 1.1. From Fig. 1.1 we can see which normal distribution is appropriate to use to approximate the posterior distribution. As in example 1.1 and example 1.2, the posterior distribution is appropriate to be approximated by the normal distribution with mean, which is the mode of the density 6 Fig. 1.1 The density functions of Beta(3, 11), N(3/14, .03655), N(2/12, .01736), and N(3/14, .0098) N(3/14, .0098) N(3/14, .03668) 01736) -0.8 -0.4 0.4 0 P 8.8 1.2 7 with respect to dv°, and variance evaluated at the mode. The posterior density function is defined with respect to some measures specific to the problem under consideration. The posterior distribution the of parameter then is approximated by the multivariate normal distribution. The approximation procedures for the one-parameter case and the multi-parameter case are given below. (A) One-parameter case (1) Determine posterior density h(0) with respect to an improper prior; (2) Find the MODE, Om, of h(0); (3) Evaluate (7 11 = [ (32 (2logh(e) lo. (1.10) (4) Treat the posterior distribution of 0 as Mem, 4) . (B) Multi-parameter case (01,...,051 (1) Obtain the posterior density h(81, ,05) with respect to an improper prior; (2) Solve alogh(0) as; (j=1,...,$) (1.12) for the MODE, Om, by the Newton-Raphson method; (3) Determine Vom a2logh (0) 1 le. , (i, j=1, . . . , s) ; (1.13) 8 (4) Treat the posterior distribution of 0 as 0 - AARV(0m, Vilm) This normal . (1.14) approximation approach will be used to approximate the posterior distribution of the potencies in Chapter 2 and used to get around the multiple summations problem in Chapter 4. There are more examples in next section to illustrate the normal approximation method using modes (with respect to a particular measure) as means of normal distributions. 1.2.3 Examples The means of the posterior distributions and the modes of the posterior density functions with respect to improper measures for some well known distributions are derived in the following examples. (A) One parameter case Example 1.3 Bernoulli. Let X1, Xn be i.i.d. Bernoulli B(p), and S be the sum of the Xi's. prior distribution of p is Beta(a, /9) for 0<p<1. Assume the The prior density function is written as = r(a) r(a) 10 + (3) dP w. r . t. dvo (1.15) P(1 The posterior distribution is Beta(a+S, n +9 -S) with (P) S+a n+a Tfar(p) (S+a)(n+P-S) (n+a+P)2(n+a+P+1) The mode and variance with respect to dv° are (1.16) 9 S +cc n +a +13 , Var (I)) 11«p) Example 1.4 (S-712)+0;+ (n+pP) 3-.9) Poisson. (1.17) Xn be i.i.d. Let X1, Poisson(0) and S be the sum of the Xi's. Assume the prior distribution of 0 is Gamma(a, fl) for 0>0. The prior density function is r (a) -112-0aeAni 71(0) (a>0 ,P>0) w.r.t. dvo = de (1.18) and the posterior distribution is Gamma(a+S, n+fl) with nn+P)2 r(e) = var(e) +P '94-c4 (1.19) ( The mode of the density with respect to dv° and the variance are the same as (1.19). Example 1.5 Exponential. Exp(A) and S be the sum of the Xi's. distribution of A is Gamma(a, Xn be i.i.d. Let X1, fl) distribution is Gamma(a+n, a+0). Assume the prior for A>0. The posterior The mean equals the mode of the density and the variance of the distribution equals the approximated variance. Example 1.6 i.i.d. N(0, a2) Normal with known a2. Let X1, and consider the estimation of 0. Xn be If we assume the prior distribution to be N(40, a02), the posterior distribution is N a h O22 2 n a2 2 1 o 1 2 n 1 02 012, (1.20) 10 Since the posterior is a symmetric distribution, the mean equals the mode and the variance equals the approximate variance. Example 1.7 Normal with known A. Let X1, i.i.d. N(A, 0) and consider the estimation of 0. Xn be Assume the prior density of u0o02/0 is x2 with uo degrees of freedom. The posterior density of ( of freedom, croz+sz =E where S2 say u1, )/0 is x2 with uo+n degrees 2. The posterior distribution of 0 has s2+1) g'(0) ° 02 °, var(e) 2 v11 -2 (s2+vout) 2 (u1-2)2(u1-4) (1.21) The prior density function is 2 -uo -U0a0 it (0) ec e-2-ir 0 2 w.r.t. dvo = e (1.22) Therefore, the mode of the density with respect to dv° and variance are s2 02 M (e) = ° , Var (0) lice) 2 (S2+13°°) 3 (1.23) Example 1.8 Let X V ..., Pareto. Pareto(0) for X1M0 and X0=1. ln(0) is Uniform(-02, co). Xn be i.i.d. Assume the prior density of The posterior density of 0 is Gamma(n, n*ln(z)), where z is the geometric mean of (X1, Xn); that is z =(11 Xe. The mean and variance of the posterior distribution of 0 are g()) - 1 1n(z) Var(0) ' 1 n(ln(z) )2 (1.24) The prior density function of 0 is proportional to one with 11 respect to d0=d0/0. The posterior density with respect to dv° has mode and variance M(0) 1 1 Var (0) Im(e) in ( z) n(ln(z) )2 (1.25) (B) Multi-parameter case Example 1.9 Normal. Let X1, Xn be i.i.d. N(01,02), with both parameters 01 and 82 unknown. Assume the prior distributions of 01 and ln(02) are independent and both are Uniform(-00, co). The posterior distribution of 01 is such that 01 ) (1.26) has a t-distribution with n-1 degrees of freedom, say v, where S2 =E (Xi-Y) 2 1 (1.27) The posterior distribution of uS2/02 is x2 with u degrees of freedom. The posterior means and variances of 01 and 82 are Var (00 r(01) = r(e,) = Var co o us2 u-2 u S2 u -2 u+1 2 (u52) 2 (u-2)2(u-4) (1.28) The covariance matrix of (0 11 0 2 ) is S2 u -2 v+1 0 0 2 (uS2) 2 (u-2)2 (u-4) (1.29) 12 The joint prior density function of (01,02) is proportional to one with respect to dva=d01d02/02. The joint mode of the posterior w.r.t durl and the approximate covariance matrix are uS2 m(e 92) = us21 , cov(el, e2) = 0 (u +1) 2 0 (uS2) 2 (U4-1)3. 2 (1.30) Modes are easier to derive than means. When the number of the observations n is large the means and the variances (or covariances) of the distributions are either close or equal to the modes and the approximate variances (or covariances). 1.3 Literature Review of the Bayesian Bioassay Recently, the Bayesian non-parametric approach has been used to estimate the tolerance distribution in the quantal bioassay. Ayer, et al. (1955), proposed an estimate of P (potency curve) based on Bernoulli data. Brunk (1970), Barlow, et al. (1972), and Robertson, et al. (1988) used the estimate of the isotonic regression to estimate the potency curve P. The isotonic regression required the function, P, to be monotonic where the estimators densities of non-decreasing were required to satisfy order restrictions. A Bayesian approach to estimating P was first proposed by Kraft and Van Eeden (1964). The prior distribution of P is 13 the Dirichlet distribution. The main properties of the Dirichlet distribution are discussed by Wilks (1962) and Johnson and Kotz (1972). Ramsey (1972) developed methods for computing the posterior mode of the joint density function. modes as estimates of the potencies. can be observed by linear He used these Thus the potency curve interpolation. The prior distribution employed is now known as the "Ramsey's prior" [28] and is similar to the Dirichlet process prior developed by Ferguson (1973). Using Ramsey's estimate, which is a smoothed version of the isotonic regression estimator, one may estimate the potency curve at any effective dose q (EDq) (the effective dose which will cause q percentage of getting a positive response). Antoniak (1974) showed that the posterior distribution of P is a mixture of Dirichlet process distributions and derived the Bayes estimator of P for two dosage levels by using the squared error loss function, where the Bayes estimators are the means of the posterior distribution of P. Unfortunately, analysis of this mixture of the Dirichlet process distributions becomes increasingly intractable when the number of stimulus levels increases. computational estimators, difficulty in evaluating To simplify the these Bayes Kuo (1988) used linear Bayes estimators to estimate the potency curve. The disadvantage of this method is that P may be non-monotonic. 14 Disch (1981) derived the marginal posterior density of P(xk), k=1,2,..,M, and P(x) , where xk is the observational dose and x is the non-observational dose. He computed the means (Bayes estimators) of the posterior distribution of P from the marginal posterior densities for any number of dosage levels. Disch also derived the prior and posterior distributions of any effective dose assuming Ramsey's prior for the potency curve. He pointed out that, if there are too many experimental dose levels or too many observations per dose level, then the computation for the posterior cumulative distribution function (c.d.f.) of EDq becomes numerically unmanageable. As noted previously, the multivariate normal distribution will be used to approximate the posterior distribution of P. Therefore, the marginal posterior distribution can be approximated by the normal distribution and the posterior c.d.f. of EDq can be estimated. The modes of the posterior distribution of P will be used as the estimators to estimate the potency curve (Ramsey (1972)). The modes of the posterior will converge to the results of mle's. Ramsey showed in an example in that an optimal design one experimental unit is assigned per fix dose level. In this situation, using Ramsey's method, we can still estimate the potency curve. Kuo (1983) used the Dirichlet process prior, in which parameters are distributed uniformly over 15 [0,1], and the squared error loss function to minimize the risk function, to derive the optimal design. design, In the optimal the doses were not uniformly spaced, but were shifted somewhat toward the prior estimated of the ED50 for two dosage levels. In this All optimal designs are dependent on p1. dissertation, two adaptive sequentially choosing design doses potency curves are developed. designs for and estimating the Both are sequential methods using Ramsey's prior and use previous step information in choosing the new dose level in each step. 1.4 Review of Autoregressive (AR) Time Series Denote by (Xt) order p. an autoregressive process of finite In general, an AR process of order p is denoted as an AR(p) process which is given by e(B)xt = wt ,t=1,2,... (1.31) where the wt are white noise with mean zero and finite variance a2. The stationary conditions for the Oi are very complicated. One way to get around the difficulty of insuring stationarity with respect to the conditions given above is to reparameterize the model in terms of the partial autocorrelations. If we let denote the kth partial autocorrelation, i.e. the conditional correlation between Xt 1 p is the prior sample size; it can be interpreted as measure the strength of the belief in the prior guess. If p is large compared to the experiment sample size, little weight is given to observations. If (3 is small compared to the experiment sample size, little weight is given to the prior guess. 16 and Xt+k given the intervening X's, Xt+i, .. . , Xt+k_1 , then an AR(p) process has Ivkl <1 for all k5p and ck=0 for all k>p (Ramsey (1974)). Barndorff-Nielsen and Schou (1973) showed that there is a one-to-one mapping from (ci, (01,...,0p) to ... , 9p) , and the stationarity conditions in terms of the Bp's are simply shown as -1<91:<1 for k=1,2,...,p. denote the kth element of 0 in an AR(p) model. Let 0 N k That is, one may solve for the O's strictly in terms of p's, i.e., k=1, 2, ...,p j=1, ...,k-1 ok,k = (Pk 0k,j = ek-1,j (Pkek-1,k-j . (1.32) Suppose there are n observations Xi,X2,...,Xn from an AR(p) process, then 0 (B) Xt=wt, t=1,2,...,n. Since wi,...,wn are i.i.d. N(0,02), the joint density of the n observations is n 1 fp (ini 6p, 02) = (27102) 2 IMpl 2 eXp{-Hp(e) /202} (1.33) where 01(1:0,...,0p,p) 1 14p={ TI ;4 ll a2 (i,j=1,2, ...,p) (k>0) Yk= r( XtXt+k ) Hp (0p) =0 11,pDp01,p °LP DP = (1' ePS" ' °NI) I d11 -d12 -d13 -die d22 d23 -d1,p+1 d2,p+1 d3,p+1 (1.34) - d2, +1 dp+1p+1., 17 n-i-j+1 E Xj.kXj+k di, = di, = k=0 the In above equation, "prime" means "transpose". Expressing 1iip1 1 2 p =H _.(14) 2 (1.35) in terms of T's, we can rewrite (1.33) as _n p i 2 [ ji (1-91) 2 (27,2) 9p. 02) = (27102) 4 * expf- 1(1)(9P) 1 202 (1.36) where Hp(Op) = Kp(ipp) (1.37) Let L be the log likelihood function of (1.33) so that L = Hp (Op) lna2 + In Ihrpl 202 (1.38) The role's for a2,0p.1,...,Opip are obtained by solving the following equations: n aL = 30 aL a + Hp(9) -0 (1.39) a3 - p,p dp+1,j+1} aep.i = 0 (j=1,2, ,P) (1.40) where M 2 lnIMpll ae,j Equation (1.39) yields the role for a 2 , (1.41) 18 B2 _ H(0*) n Unfortunately, (1.42) the equations of are not easily (1.40) solved, since the Mj are very complex functions of the B's. These mle's will be discussed further in Chapter 4. One approximation to the exact role's of the B's results from ignoring the term L, dominates inl m I involving I MpI , because Hp(0) for sufficiently large samples (Box and Jenkins (1970)). Then, o*p = (Dp) -1 dp where dp= (d12,d13,.,d1,p0 ) (1.43) ',Dp first row and first column. i is the same as Dp without the These are generally called the least squares estimates of Bp. The primary interest here is to estimate the order p of the autoregressive model. Recently, increasing use has been made of goodness-of- fit criteria, which depend on the role of the variance a2, say, n E rte (P) R 2-1 (1.44) n where r t (p) are the estimated residuals from a model with p parameters estimated. Akaike (1969, 1970 and 1974) advocated a decision theoretic approach and used the future prediction error (FPE) for the model of order p, FPE(p) (n+P+1)R n -p 1 P 0,=1,2, ...,A6, and Akaike's information criterion (AIC), (1.45) 19 AIC(p) = 2P (1.46) where we may simply choose the model order p as the value that minimizes FPE(p) or AIC(p). Modifications to AIC(p) have been suggested to improve the large sample performance, since Shibata (1976) showed that we do not get a consistent estimator for the order using AIC(p). These suggestions relate to replacing 2p/n in (1.46) by pn-11n(n) 1978; Schwarz 1978) or by 2pn-11n(ln(n)) (Rissenan (Hannan and Quinn 1979), which will yield consistent estimators for order. simulation study of Lutkepohl A (1985) has shown that for multivariate autoregressions, the modification of Schwarz (1978), sometimes called the Bayesian information criteria (BIC), BIC(p) = In Rp + pinn n (1.47) leads most often to correct estimates for model order and has the smallest mean squared prediction error. Robb (1980) also used a Bayesian approach to order estimation of autoregressive time series. The marginal posterior probability distribution of the order, given the data, is obtained. The value with maximum posterior probability is the Bayes estimate of the order with respect to a particular loss function. The form of the density function of the order, given the data, is very complicated. As noted previously, the normal approximation method is used here to simplify complexity. 20 1.5 Organization of the Dissertation In Chapter 2, the modes (most probable values (MPV) estimators) of the posterior distribution, and the point estimators and their associated normal approximation inferences regarding an effective dose in Bayesian bioassay are presented. In Chapter 3, two adaptive methods for sequentially choosing fixed doses and estimating the potency curves are developed and comparisons with non-adaptive, up- and-down, Robbins-Monro, and Spearman-Kdrber methods for estimating the ED50 are given. In Chapter 4, the marginal posterior of density autoregressive time function series is the order discussed. approximation method applied to The of the normal simplify the multiple integrations required to compute their densities is given. In Chapter discussed. 5, the conclusions of the dissertation are 21 MOST PROBABLE VALUES (MPV) ESTIMATORS 2 OF THE POTENCIES IN BAYESIAN BIOASSAY 2.1 Model of Bayesian Bioassay The function P(x) function in x. is assumed to be an increasing For observational doses xi it is assumed that x1<x2<...<xm. Pi. M) The random variable si has a binomial distribution with parameters assume that si, (i=1, (ni, P(x1)). We sm are independent and denote P(x1) as The joint likelihood for Pl, ..., Pm is L (.91, . . . , Stet I P1, . . . , Pm) ac 1-1 Pis' (1-Pi) . (2.1) 1-1 Prior Distribution The prior chosen is Ramsey's prior [28] (Ramsey (1972)) which is a Dirichlet process prior with parameter alp (i=1,2,..., M+1) (see also Ferguson (1973)). Let a1 be non- negative constants and the summation of a1 (1= 1,2,..., M+1) be unity. Let the function Q(x) be a prior guess at the unknown potency curve P(x) and denote Q(x1) as Q1. We can select al = ai = Qi Qi-1 am.1 = 1 QM (i=2, 3, , )4 (2.2) For any observational doses xi<...<xm, the successive differences in potency have an ordered Dirichlet distribution with the density functions r and r° with 22 respect to the Lebesgue measure, dv, and an improper measure, dv°, respectively, where M +1 fl i=1 - Pi -1) (Pi ads -1 w. r. t. dv (2.3A) M +1 (Pi Pi_1) ash i=1 w.r.t. dvQ (2.3B) where dv = n (dPi) (2.4A) dv dvQ n (Pi Pi -1) and O<P7 <...<Pm5_1. (2.4B) Note that P0=Q0=0 and Pm+1=Qm+1=1. For any non-observational dose x between xk and xk+i, we assume an ordered Dirichlet prior over (P1, Pk+1, ..., Pm) with parameters (91, ..., 9, 9*, 9M+1) and 0.5_1D15_....PkP(x).5_Pk+1...Pm1 where Pk/ P(x) 9k+1, I Vi = PQ1 = alP Qi_1) = Bpi = P (Qi = 13 (1 (Pm+1 QM) q)* = 13 [Q(x) = P [Qk+3. (p* + 0** = E aiP (1=2, ...,k, k +2, .. A) = am+113 Qk] Q(x) ] ak+iP =P (2.5) Then the prior is proportional to M+1 i-1,i*k+1 (pi -Pi -1) [P(x) -pk],.-1 [pk+1 -p(2) ,9-1 (2.6) 23 Note that P0=0 and P14+1=1. The marginal distribution of P(x) is a Beta distribution, P(x) Q(x) *$, (l-Q(x)) *# ). Thus, prior mode = prior mean = Q(x). The constant is non-negative and can be used to specify the degree of smoothing in the posterior estimate. For #=0 and #-00, the posterior estimators are the isotonic regressor and Q, respectively. Also, fl can be interpreted as a measure of the strength of belief in the prior guess Q. Posterior Distribution The joint density of the posterior distribution for the observational doses is proportional to M+1 [ H Pisi w.r. t . [ i=1 dv (2.7A) or M+1 (1-Pi) [ i=1 [ H aiP] i=1 w. r. t. dvo (2.7B) If there is a dose x between xk and xk+i, the joint density of the posterior distribution is proportional to [P(x) -4] 9-1 M+1 [pk+i-P(x) 9---1 H (P1 -P2_1) 9i -1} i=1,i*k+1 M 1=1 or PiSi w. r . t . dP(x)ildPi (2.8A) 24 M+1 {[P(X)Pk]*.[Pic+1-1)(A7) ] il II (Pi P1-1)14)1} 1=1,1*k+1 * TIPP i=1 II dPi dP (x) w. r. t. M +1 [P(x) -Pk] [Pk+i-P(x)] i=1,i*k+1 (2.8B) 2.2 Modes of the Posterior Distribution For the potency curve, P(x), both the joint modes and means of the posterior density may be considered estimators . as For calculating the means, we need to derive the marginal posterior density functions of Pi from (2.7A) (Disch, 1981). In what follows, we will concentrate on the joint posterior modes as estimators, and we will refer to them as "most probable value" g(P1,..., Pm) be expression density function. (MPV) estimators. Let which is the joint (2.7B), Setting the partial derivatives of the logarithm of g(P1,..., Pm) with respect to the potencies to zero, we have the expressions api log g(P1, (P1, . . . Pm) Si 1 Pi n.-si + 3. -Pi (1 =1, 2, where P=(P1, aiP ..., Po=0, and Pm+1=1. ..., Pm), i,j=1,...,M, where 21=(H1, ai#141 Pi (2.9) Let f = (f1, and df=[dfu] fm) , for 25 = logg (P) a si ni-si Pi 1-Pi aip ai+iP Pi -pi -1 Pi+1-Pi (i = 1, =0 a2 dfL i = logg(P) ..., (1=1, (3 .P1 ni-si -si (1....pi) aPi aPi-1 32 logg(P) = 32 apiapi (2.11) aiP (2.12) (Pi-Pi-1) 2 a = +11 (i= 1,...,M) (2.13) (Pi+l-Pi) 2 aPiaP14.1 df AO ( pi.cpi) 2 (Pi-pi -1) 2 logg(P) = (2.10) ai+10 2 32 df., , logg(P) = 0 for li jI z 2 (2.14) We can solve the M equations in (2.10) for modes H by using the Newton-Raphson iteration process with Pr Pr+i f (Pr) dri (Pr) (2.15) for the (r+l)th iteration P"1 until the sequence converges to H. These modes are unique since (2.7B) function. is a concave In the Newton-Raphson method in the bioassay problem, the solutions of modes are very sensitive to the initial values Po. introduced by Ayer The et isotonic regression estimator al. (1955), Brunk (1970), and Robertson (1988), will be used as the initial values of Po. The simple form of this estimator is s s P(x) = min max (Esj/En) i ilsOf 1li For the j =r Dirichlet (2.16) .1'-r distribution, the means of the 26 distribution equal the modes of the density e with respect to measure dv °, which is a property of the Dirichlet prior distribution. It will not be so in the posterior. In the following example, we will see how different the modes are from the means. Example 2.1 Consider the dose levels M=2 and the prior guess Q(x)=x for 0 .x1. Assume the observational doses are x1=1/3 and x2=2/3 and get ai=1/3 for i=1, 2, and 3. Then the prior density function is proportional to 1 1 P13 (P2-P1) 1 3 (1-P2) 3 w. r. t. otO (2.17) and the posterior density function is g(Pli P2) 4122-32 S P13 (1-P1)n1-51(P2-P1) 3 P22 (1-132) 3 w. r. t. dvo (2.18) where dvo dP1 dP2 P1(P2 -P1) (1-P2) (2.19) Let B(a,b) be a Beta distribution with parameters a and b. The posterior means of the posterior distribution, of P1 and P2, with respect to dvadPi for i=1,2 should be s2 8T1,1) = c E{(-1) I CgAB(i+n2-s2+1, * B(s +1+1, i+ni-si+n2-s2+ 3 } 3 th-s, X(P2) = C E {(-1)-itnisiBu+s1+4, j =0 k 1 * B(j+si+s,+ +1, n2-s2+1)} (2.20) 27 in which the normalizing constant C can be obtained from the following formula n -s 1 = E {(_1)ichis1B(J+s1+4, 4)* (2.21) B(j+s1 +s2+4, n2 -s2 +2)} Define gl and g2 as ) ( = alogg s +.3 n1 -s1 8133. P1 1 -P1 (pi, P2) = f_o_gs 1 I.3 P2-P1 aP2 2 P2 -pi. s2 - 13 +n2 -s2 (2.22) 1 -P2 P2 The modes of P1 and P2 will be such that g1 and g2 equal zero. of The forms of the modes are not explicit but the forms the means are known (2.20). In order to evaluate the differences between the modes and the means we replace the modes of P1 and P2 by the means in (2.20) and evaluate gi(r(Pi) r(P2)) a g2 g'(P2) (r(Pi.) ) " 0 (2.23) In the following two examples, the difference between the modes and the means are examined. The values of g1 and g2 are evaluated at r(P0 and r(P2) from (2.19) n1 =n2=2 , for the cases both of )9=1,2 n1 =n2=1, (see Table 2.1 and 2.2) . )3=1,2 and of In Table 2.1, n1 =n2=1, /3=1,2 and the absolute values of gi (r(P1), g'(P2)) and g2(g1P1), (1,0) , are less than .00005 if g'(P2)) and (1,1) . For (s1,s2) = (0,1) , (si,s2) = (0,0), the absolute values 28 of gl and g2 are a greater than 0.2. In Table 2.2, n1 =n2=2, and the absolute values of 0=1,2 g2(r(P1), r(P2)) g1(r(P1), are less than .0002 if (1,0), (2,0), (2,1), and (2,2). (s1,s2) r(P2)) and = (0,0), For (si,s2) = (0,1), (0,2), (1,1), and (1,2), the absolute values of functions g1 and g2 are greater than 0.15. From Table 2.1 and Table 2.2 we see that the means are equal to the modes (g1.0) when s1 >s2 and the means are not equal to the modes (g1 #0) when s1<s2. We can also observe that H1 5r(P1) and H2r(P2) for s1 5s2, where Hi is the mode of Pi. In general, for any M dosage levels, if there exists any si5si.o, then H1 5..r(P1) and Holr(Pm). The joint modes at the peak of the posterior distribution will converge to the mle's. The joint modes of the posterior density will be used to estimate the actual potency curve. 2.3 Point Estimator of an Effective Dose Ramsey (1972) developed a method for computing the mode which is used to estimate the true potency curve. estimator can estimate any effective dose. mode of ith observational dose. His Let Hi be the The estimator H(x), of P(x), at dose level x is If (A7) = 11. 2 + Q(x)-Qi H1 -Hi {(21+1 Qi} (2.24) where Q0=H0=0 and Qm+1=Hm+1=1. When estimating the effective dose EDq, the experimenter observes which dose xh yields H(xh)=q. In other words, if the observational dose xi is 29 Table 2.1 The values of (gi (r(Pl) , '(P2)) , g2 and (H1, H2) for n1 =n2=1 and /3=1,2 ray , P (si, so ('(P1) , r(Po (H1, HO (0,0) (1,0) (1,1) (.11111,.28889) (.20635,.79365) (.44445,.55556) (.71111,.88889) (-.00003,.00001) (-.21220,.21219) (-.00001,.00001) (.00000,-.00005) (.11111,.28889) (.18765,.81235) (.44445,.55556) (.71111,.88889) (0,0) (0,1) (1,0) (1,1) (.16667,.40476) (.25758,.74242) (.41667,.58333) (.59524,.83333) (-.00002,.00002) (-.13372,.13371) (-.00001,.00001) (.00000,-.00003) (.16667,.40476) (.24994,.75005) (.41667,.58333) (.59524,.83333) 1 (0,1) 2 I A (g1, g,) r(p2) ) ) : evaluated at (r(P1) , r(P2) ) Table 2.2 The values of (g1 . ('(P1) Rp2) ) g2(rp1) , Rp2) ) ) and (H1, HO for n1 =n2=2 and /3=1,2 (si,s,) ('(P1) , ray ) (g1, gO (H1, (0,0) (0,1) (0,2) (1,0) 1 (1,1) (1,2) (2,0) (2,1) (2,2) (.06667,.18333) (.12917,.49834) (.13446,.86554) (.26667,.35833) (.40952,.59048) (.50417,.87083) (.46667,.53333) (.64167,.73333) (.81667,.93334) (-.00005, .00001) (-.62512, .28126) (-.28769, .28767) (-.00002, .00002) (-.27985, .27985) (-.28129, .62514) (-.00001, .00001) (.00001, -.00002) (.00003, .00016) (.06667,.18333) (.10613,.51484) (.12159,.87841) (.26667,.35833) (.40055,.59945) (.48515,.89387) (.46667,.53333) (.64167,.73333) (.81667,.93334) (0,0) (0,1) (0,2) (1,0) 2 (1,1) (1,2) (2,0) (2,1) (2,2) (.11111,.28889) (-.00004, .00002) (.16945,.53056) (-.31998, .18069) (.19834,.80166) (-.23857, .23857) (.27778,.42222) (-.00002, .00002) (.38384,.61616) (-.15042, .15042) (.46945,.83056) (-.18069, .31975) (.44444,.55556) (- .00001,-.00000) (.57778,.72222) (.00000, - .00000) (.71111,.88889) (.00002, - .00009) (.11111,.28889) (.16057,.53889) (.18828,.81172) (.27778,.42222) (.37994,.62006) (.46110,.83943) (.44444,.55556) (.57778,.72222) (.71111,.88889) 'A': evaluated at (r(P1), r(P2)). 30 such that H1 =q, then the estimated EDq is dose x1. Otherwise, we can determine a pair of (xi,xi+i) which will satisfy Hi<q<Hi.o. Q(xh) in which H(xh)=q. Q(xh) = 0- + 1 We have the equation Q(xh) H(xh) Qi (2.25) Therefore, we have (1-111 1/141 Qi) 111(Q1+1 (2.26) Once we obtain Q(xh), we can find the estimated EDq which is xh from Q-1. Example 2.2 (continuation of example 2.1) For n =n2 =1 and 19=1, 1 2, we know that the estimated potency curve by using means and modes are different for (s1,s2)=(0,1) but the estimated ED50 (=0.5) are the same in both cases. In this case, both means and modes give the same estimated ED50. Similarly, for n1 =n2=2 and fl=1, 2, the estimated means and modes are different for (s1,s2) {(0,1),(0,2),(1,1),(1,2)). e Both means and modes have the same estimated ED50=0.5 for (s1,s2)=(0,2) and (1,1). For (s1 ,s2)=(0,1) and (1,2), the estimated ED50 for means and modes are displayed in Table 2.3. 2.4 Bayesian MPV Estimators Inference 2.4.1 Prior and Posterior Distributions of an Effective Dose In section 2.3, we determined the point estimate of an effective dose. Disch (1981) derived a prior c.d.f. of the 31 Table 2.3 The estimated ED50 from means and modes for n1 =n2=2 and /3 =1 and 2 g (s1, s2) 1 (0, ED50 from means 1) (1, 2) 2 (0, 1) (1, 2) Ed50 from modes .66777 .33223 .65456 .34544 .63846 .36153 .63240 .36760 effective dose q (EDq) which is an incomplete Beta(1-q;b,a), a=pQ(x) and b=P(1-Q(x)). The posterior c.d.f. (derived from the marginal posterior distribution of P(x)) of the EDq is a linear combination of the incomplete Beta distribution functions. Computation distribution of P(x) of the marginal posterior involves multiple summations which cause complexity of computation. The normal approximation method can be used here, so the posterior distribution of the potencies can be approximated by the multivariate normal distribution and the marginal posterior distribution of P(x) can be approximated by an univariate normal distribution. 2.4.2 Normal Approximation Method for the Bayesian MPV Estimators Inference The posterior density function is proportional to M { II P:71 i=1 M+1 1-1 w.r. . t. dvo .z=1 = g(p) (2.27) The modes H=(H/,...,EW can be calculated by using the Newton-Raphson iteration process described in section 2.2. 32 The approximate covariance matrix, VH, is defined as a2 logg(P) ( vm) 1 (2.28) the approximate joint posterior distribution of So, Pi (i=1,...,M) is P MVN( H, ) VH (2.29) and the approximate marginal posterior distribution of Pi (i=1, M) for the observational dose xi is N(H1, V(Hi)), where V(Hi)= [VH]fl. For any non-observational dose x between xi and xi+i, we have (Ramsey (1972)) Q(x) -Qi P(x) Pi Q1+1- Q(x) P(x) (xi <x < xi.1) . (2.30) From (2.30), we can find P (x) = P (xi) + Q(x) -Qi (Pi+i Qi+1 Pi) P1) = Pi + t (2.31) where Q(x) wi+3. (2.32) Qi Therefore, the marginal posterior distribution of the nonobservational dose x for xi<x<xi+i can be approximated by P(x) ....N(r(P(x)), Var(P(x))) (2.33) where '(P(x)) = Hi + t (Hi+i Var(P(x)) = (1 t) 2 Hi) Val- (Pi) + + 2 t (1 t2 Va. r(Pi+i) t) Cov(Pi, P1 +1) (2.34) 33 and, the approximated posterior c.d.f. of EDq is 1 -E. f(y) dy = 1 0(q- r(P(x))) (2.35) slVar (P (x)) ) where 0 is a c.d.f. of standard normal distribution. If the estimated EDq is the observational dose xi, f(y) will be the density function of N(Hi, V(Hi)) density of (2.33) . However, f(y) will be the if the estimated EDq is between xi and xi+1' Example 2.3 We want to estimate the first quartile, of the distribution of the EDq. T1, If there is an observational dose such that FEDq(xi)=Pr(EDq5.xi)=.25, we have Ti=xi. (xi, If not, we determine the pair of observational doses xi+1) such that FEDg (Xi) ) < . 25<FEDg (Xj+1 ) , i.e. xi<Ti<xi+i and FEDq (TO = 1 (D(qVVar (P(71)) (2.36) We rewrite (2.36), which should be a quadratic function of , as q-ir(P(ri)) - 0-1(.75) IlVar (P(Ti)) (2.37) where '(P (T1)) and Var(P(TO) then solve for T1. are described in (2.34) and 34 3 ADAPTIVE DESIGNS FOR ESTIMATING THE POTENCY CURVE 3.1 Adaptive Designs The adaptive designs developed here are for sequential selection of the test doses for estimating the potency curve. Then use the estimated potency curve to obtain the final ED50 estimate in the last step. The prior is assumed to be the Ramsey's prior [28] (Ramsey (1972)) method is in this Bayesian analysis. sequential, the prior modal The adaptive function incorporating into a non-informative function. Q(x) is uniform over analysis. available [0,1] testing at We assume in the first step of the If there are L (=m*n) for Q(x) fixed experimental subjects doses chosen by the experimenter, Ramsey (1972) showed that the best design (in the sense of estimating the ED50 by comparing bias, standard deviation, and the mean square error) used one subject per dose. In this adaptive method, we will perform n steps and assign one subject per dose to m doses. In the first step, we choose doses uniformly for dose i/(m+1), i=1,..,m. Then, the estimated potency curve is used as the prior modal function to find the new dosage levels for the next step. Algorithms for evaluating two adaptive designs using (A) full information and (B) reduced information follow. an example for L=6, m=1 and n=6, these two adaptive designs. Also is given to illustrate 35 (A) Full Information Method The prior is proportional to (P(xj)-P(xj_1))4i13 (3.1) We choose 0=2 for all n steps and use m doses in each step. In the last step we use L (=m*n) doses and full prior distribution, incorporating all L parameters, to estimate the potency curve and the ED50. The algorithm is shown below. Step 1 : Q(x)=x, sZox.51. Selected dosage levels: xLi= i /(m +l), i=1,...,m. m+1 Prior ..: II (P(xl,i) -P(xi,i_l) )441, p1=2, al= n74-1 Likelihood ac where (3.2) , 1 P (xi) 8 (1-P (2ci,i) Posterior c< Likelihood * Prior. )i-s,.i (3.3) Evaluate the new m doses from the posterior modal function, 111(x), such that x2,i=1.11-1(i/(m+1)), i=1,...,m. Step k (k=2,...,n-1) : Selected dosages (X1,...,X0, where .xiadi xm "1= (x1.1, x J,I, ,m =(X , Sort Sil i )l ' SI kin x 2 ILT3. =41' J-1 k/ .. 1 m+1 Lr-1 III' / M \\/ m+1 j=2 , , k 36 by the first column, xj,i, to (xt,st), where X= (xi , ,xkm) Ey=(sko, , i sk,m) 131=-"(s1 , " I skm) km Likelihood cc f P(xi) si (1-P (xi) ) 1 -si (3.4) i-3. Jart+1 cc H Prior ( P (xi ) -P (xi where ) ) 41115k , i=3. Pk=2, ai=xi-x1_1, i=1,...,m+1. (3.5) Posterior c< Likelihood * Prior. Evaluate the new m doses from the posterior modal function Hk(x) such that xk+i,i=Hk-1(i/(m+1)), i=1,...,m. Step n : Selected dosages (Xi, 21=(x1,1,.",xim) ,Xn) , where i xm (11;11 ( j j=2,...,n zf Sort , ' II ( rij-1 k m+1 M )) . sit SI Lx2 by the first column, xbi, to (xt,st), where X--(x1,...,x), 8=(si,...,s1.). Likelihood oci=iI P (xi) si (1-P (xi) ) 1-si (3.6) L+1 Prior cc (P(xi) -P(xj_1)) ai/Sn, where (3.7) Pn=2, Posterior oc Likelihood * Prior. The estimated potency curve Hn(x) is the estimated posterior modal function. 37 (B) Reduced Information Method The prior is proportional to (3.1), where ai=1/(m+1), i=1,...,m+1. We begin by choosing /3=2 and then, for each step, increase Q by the increment m. The posterior modes are computed in each step and the posterior modal function Hk(x) is adjusted from the previous step modal function Hk_1(x). The new m doses are chosen from the adjusted modal function Hk(x). Step 1 The algorithm is shown below. : Q(x)=x, Selected dosage levels: xL= i /(m +l), i=1,...,m. m+1 Prior oc II (p(x) -p(x,) )441-, 01=2, a1= m1 +1 1 where 4 -=-,..,m+1. (3.8) Likelihood cc 11 P(x1,i)s"(1P(x1,i))1 -s,,i (3.9) iii Posterior c< Likelihood * Prior. Evaluate the new m doses from the estimated posterior modal function H1(x) such that x2, i=1-11-1( i/ (m+1) ) Step k (k=2,...,n-1) , i=1 , . . . ,m. : Selected dosages Xk=(xko,...,xk,m) m Likelihood cc fl P(x.k,i) S" (1--P(xk,i)) 1-sk1 (3.10) m+1 Prior ac fl (p(xk,i)-p(xk,i_1)) i-1 where (3.11) Pk=Pk_l+m, ai= m1 1 , i=1, ...,m+1. 38 Posterior ec Likelihood * Prior. The estimated posterior modal function is 0 sxsxk,i 14(Xk,l) Hk-1(X) [ (i +1) Hk(Xk, i) 1Hic(XJ, i+1)) (m+1) 1 + (111+1) (lik(XL i+3.) lik(XL i) ) Hki. (X) 14(x) = r for Xk,15 X SXk.ifi, i=1,2,...,m-1 [(m+1)Hk(X.kad m] + (Ri+1) (1Hk (Xk,m) ) Hk_i (X) , for xk,m where Hic_1 sx s 1 (xk,i)=i/(m+1), i=1,...,m. chosen as xk+iii=Hk-1(i/ (m+1) ) Step n (3.12) , The new m doses are 1=1, ... ,m. : Xn=(xn,i,...,xn,m) Selected dosages m Likelihood oc II P i-i (x, i)84" (1-P (x, i) )1-sn'i (3.13) m..1. Prior oc if (P(x,i)-P(x,i..3.))ailln, where i=i Pm=i3m-i+m, ai=m+1 Posterior ec i, 1=1, ...,m+1. Likelihood * Prior. (3.14) The estimated posterior modal function is (m+1)Hn(Xn,i)Hn-1 (x) , 0 Sx5xn,i [(i+1)H(x,i)-iHn(xn,i+1)) Hm(x)= +(m+1) (Hm(xn,i+1) -11,2(xn,i))Hn_1(x) , for xn,is x sxn,i+1, i=1,2,...,m-1 [(m+1) H (xn,m) -m)+(m+1) (1-Hn(xn,,))Hn_1(x) for xn,m sx s 1 where H 11-1(x0=i/(m+1), i=1,. , (3.15) .. ,m. The estimated potency 39 curve function Hn(x) is the estimated posterior modal function. Example 3.1 Let L=6, m=1 and n=6. The procedures for design A and design B are the same in the first step. Step 1: Prioroc13(x1,1)111u1 (1-P (x1,1) ) I31a2 (3.16) where fl1 =2, ai=1/2, i=1,2. Fixed dose x141=1/2. so, Prior .2c P(1/2)[1-P(1/2)] Likelihood 04 Posterior cc P(1/2) 81.1(1- P(1 /2) )1 -81.1 (3.17) P(1/2) 81.1+1(1-P(1/2)) 2 -S'.1 (3.18) -> The estimated mode is H1(1/2) S1.+1 3 =1 2/3 6 (3.19) H1(1/2)=1/3, so (see Fig. 3.1) 1-x2,1 1-1/2 1-x1,1 1 -111.(xl_i) - x2,1=5/8 Fig. 3.1 Determination of x21 for s1,1=0 in the first step 0.9 0.3 0.7 0.6 03 0.4 0.3 0.333 Di 0.1 V s1 1 =1 H (1/2)=2/3, so (see Fig. 3.2) 1 (3.20) 40 Ic2,1 _ 1/2 x2,1 =3 x1,1 /8 (3.21) After the first step the procedures diverge. illustrated separately. They are For ease of explanation, design B is discussed first. Fig. 3.2 Determination of x2,1 for si,f=1 in the first step 1 110 0 6 5 3 2 .1 n n. n , n i A A fl ft76 f i ...7 11:11 09 1 X2,1 Design B Step k: (k=2,...,6) Prior°c P(xk,1)13kul (1-P (xk,l) ) giku2 (3.22) fixed dose x1(,1 is selected from the (k-1) th step, pk=1+k, a.=1/2, i=1,2. So, 1+k Prior e< P (xk,i) 2 (1_p(xk,1) ) Likelihoodoc P(xk,i) 1+k 2 (3.23) (1-P(xk,1) )1-8k>_ (3.24) 1+k+sk.i Poster ior <P(xk,i) 1+k (1P(Xic,i) ) The estimated mode is (3.25) 41 k+1 Hk(Xk, sk,14- 2 k+2 1 1 2 2 (A*2) ' fssk,1=1 (3.26) For example k=2, H2 (x2,1) (1) 3/8 , 52,1=0 5/8 S2,1=1 s1,1=0 s21=0 : the fixed doses are x11=1/2, x2,1=5/8, and H1 (x1.1) =1/3, H2(x20)=3/8. so (3.27) H2(x1,1) 112(x) can be expressed as (3.12), = 2*112(x2,1) *Hi (x1,1) = 2 (3/8) (1/3)=1/4. H2(x3,1)=1/2, H2(x2,1)<H2(x3,1)<1, (see Fig. 1-x3,1 1-x2,1 1-1/2 1 -H22- (X2,1) Since 3.3) x3,1=0.7 (3.28) Fig. 3.3 Determination of x31 for s10=0 s2,1=0 in the second step a9 it2(4 06 9.7 9 05 0 :-..9 3 ol 2 0. 1 0 f uo20.30.40.5umuu i X3,1 (2) s11=0 s21=1 : the fixed doses are x11=1/2, x21=5/8, and H1 (x1,1) =1/3 so H ( ) 112 (X2,1) 5/8. 2*H2 (x2,1) *Hi H2 (x) (x1,1) can be expressed as (3.12), = 2 (5/8) (1/3)=5/12. H2(x3,1)=1/2, H2(x1,1)<H2(x3,1)<H2(x2,1), (see Fig. 3.4) Since 42 2 X1,1 * ( .5-H ()) X2.1 -X1.1 x3.1 x11+ H2 (X2.1) H2 (Xi,i) = x3,1=0.55 (3.29) x31 Fig. 3.4 Determination of for s 1°=0 s2,1=1 in the second step . 1 09 10(1) a 07 .923 04 0S . 04 i Ufa 0. 3 0. 2 t 1 0 0 0.1 0.2 03 OA OS a 0.7 0:8 09 i (3) s10=1 s2,1=0 : the fixed doses are x1,1=1/2, x2,1=3/8, and H2(x) can be expressed as (3.12), ili(xi,i)=2/3/ H2 (X2,1)=3/8* so H ( [2*H2(x2,1) -1 = ]-1-2* (1-H2(x2,1 ) *Hi (x1,1)=0.58333. Since H2(x3,1)=1/2, H2(x2,1)<H (x3,1)<H2(xi,i), L1X2,1 X3,1 = X2'1+ H2 (X1X,1) H2 (X2,1) * (see. Fig. 3.5) 5-112 (X2,1) ) X3,1=0 45 (3.30) Fig. 3.5 Determination of x3,1 for s 1,1 =1 s 2,1 =0 in the second step i 09 09 0. 7 6 6 -SU 4.. 05 O 03/ 0 3 02 0. 00A0.20.3040.50.60/0209 x3 , 1' 1 43 (4) s1,1=1 s2,1=1 : the fixed doses are x1,1=1/2, x2,1=3/8, and H1 (x1 1)=2/3, H2(x2,1)=5/8. H2 (x) can be expressed as (3.12), so H2 ( XL1 ) = [2*H2(x2,1)-1] +2*(1-H2(x2,1))*H/(x0=0.75. H2(x3,1)=1/2, O<H2(x3,1)<H2(x2,1) x3,1 X2,1 1/2 H2 (X2,1) , Since (see Fig. 3.6). x 3,1 =0 3 (3.31) Fig. 3.6 Determination of x3,1 for s1 1 =1 s21=1 in the second step 1 mod 09 0 0 77 0. 1 5 04 03 02 0. 1 o 0 0.1 0.2 0.3 OA 0.5 Ob X3,1 This continues from k=2 to k=6 and the final selected dose in the last step is the final ED50 estimate. The six selected doses and the final ED50 estimate are shown in the Appendix. Design A Step k: (k=2,...,6) Let the fixed doses X=(x1,1,fxko), where x 1(0 is selected from the (k-1)th step, and the corresponding responses are . Sort X in ascending order, such that xi<...<xk, with corresponding S=(si,...,sk). k +1 Prior 41 (P(xi)-P(xi_0)ailik 11=1. (3,32) 44 ai=xi-xi_1, where 13k=2, i=1, ,k+1, (xo=0, xio0=1, P(xo)=0, P(xk+.1)=1). k Likelihood oil P(xi)si (1-P(xj))1-si (3.33) 11-1. k k+1 Posterior .11 P (xi) si (1-P (xi) )1-si -r-r n (p(x,) -p(xi_o ) 2ai i1 1=1 There is no explicit form of H(x1). (3.34) The Newton-Raphson method is used to calculate H(x). (1) So, s11 =0 s2,1=0 7L=(x1, ai=1/2, x2)=(1/2, 5/8) and El= (si a2=1/8, H2(x2)=.34375. X3=1, H2 (X0)=0 X the fixed doses are x1,1=1/2, x2,1=5/8. : and a3=3/8. If H2(x1_i) , H2 (X3)=1) , We H2(x30)=0.5 , s2) = (0,0) , have p2=2, /31=2, H2 (X1) =0 . 25 and H2(x1), i=1,2,3 (x0=0, then Xi-Xi_1 * ( . 5-H2 (Xi_i) ) 3'1=X2-1+ H2 (Xi) -H2 (Xi_i) (3.35) From (3.35), x3,1 can be calculated as .71429. (2) sl=0 s2,1=1 : the fixed doses are x11=1/2, x2,1=5/8. So, X =(x1, x2)=(1/2, 5/8) and S=(si,s2)=(0,1), ai=1/2, a2=1/8, a3=3/8. H2(x2)=.68038. and From (3) s1=1 s2,1=0 : (3.35), We have H2(x1)=0.39522 a2=1/8, and x3,1 can be calculated as .54593. the fixed doses are x1,1=1/2, x2,1=3/8. So, X =(x1, x2)=(3/8, 1/2) and 8=(si,s2)=(0,1), a1=3/8, 132=2, 13 =2, and a3=1/2. pi=2, We have H2(x1)=0.31962 132=2, and H2(x2)=.60478. From (3.35), x3,1 can be calculated as .45407. (4) sio=1 s21=1 : So, X =(x1, x2)=(3/8, the fixed doses are x11=1/2, x2,1=3/8. 1/2) and 121=(s1,s2)=(1,1), /31=2, 132=2, 45 a1=3/8, a2=1/8, H2(x2)=.75000 and a3=1/2. We have H2(x1) =O. 65625 and From (3.35), x3,1 can be calculated as .28571. This continues from k=2 to k=6 and the final selected dose is the final ED50 estimate. The six selected doses and the final ED50 estimate are shown in the Appendix. An example of computing the exactly sampling distribution of the final ED50 estimate will be given in next section to evaluate the efficiency of different combinations of m and n in estimating the true ED50. 3.2 Designs for the Adaptive Methods Assume that the actual potency curve is P(x)=xd, d>0, The goal of this section is to construct the best design for estimating the true ED50 of a given L subjects. For L=6, four experimental designs are examined. With the possible {n;m} arrangements, we consider {6;1), {3;2), {2;3), and {1;6) experiments where n is the number of steps and m is the number of doses. subject in each step. Each dose is assigned to one There are 64 possible outcomes for all experiments. For L=12, six experimental designs are examined. With the possible {n;m) arrangements, we consider {12;1), {6;2 }, {4;3), {3;4), {2;6), and {1;12) experiments. There are 212=4096 possible outcomes for all experiments. The values of d are chosen from [ .001, 20]. For any d, calculate exactly sampling distribution for the final ED50 estimate. The relative efficiency (r.e.) is used to compare 46 (n;m) designs with (1;L) design in adaptive method A (full information) and method B (reduced information). For convenience, we will adopt the following to describe the experiments: Anm : adaptive method A for n steps and m doses per step. (fl=2 for all steps); Bnm : adaptive method B for n steps and m doses per step. (31=2, Pi=pi.i+m for ith step, i=2,...,n). AIL and B1L are equivalent designs. The selected doses x,,...,x6 and estimated ED50, L=6, for Anm and Bnm designs are shown in the Appendix. The r.e. of design Y relative to design X is defined as r.e. (Y/A) mse(X) 100% mse(Y) (3.36) For convenience the notation "Y/X" is used for r.e.(Y/X). Note that the scales of all figures for d in this chapter are logarithmic. The notation d-1 will be used for de(.5,4); otherwise, d#1 will be used. The best designs of adaptive methods for L=6 and 12 are shown in Table 3.1, 3.2, respectively (see Fig. 3.7 3.10). From above computation, we see that design B, with one dose (close to the prior ED50) per step, is the best (highest r.e.) for estimation of the true ED50 if the initial uniform prior modal function Q(x) true potency curves (d-1). is close to the If the prior guess is bad (prior ED50 is not close to the true ED50 for d4.1), design A for man appears the best. Assuming P(x)=xd, d>0, Ox5.1 and L=6 (L=m*n) , there are 47 Table 3.1 The best designs for the adaptive methods (L=6) Method A A61 B61 A23, A32 B16 d.-1 d+1 Table 3.2 Method B Both A and B B61 A23, A32 The best designs for the adaptive methods (L=12) Method A Method B Both A and B B121 d-1 A121 B121 d+1 A34, A43 B112 A34, A43 four methods which will be described in the following sections for estimating the ED50: (A) one-step method (nonadaptive), (B) Spearman-Karber method (non-parametric) (27] (Finney (1964)), (C) up-and-down (staircase) method (Dixon (1948, 1965), Little (1974)), and (D) Robbins-Monro process (Cochran and Davis (1965)). 3.3 One-step (Non-adaptive) Method This is a one-step method of Bayesian bioassay. Bayesian posterior modes for /3 =2, ai=1/(m+1), i=1,...,m, are used to estimate the potency curve. We assign n subjects per dose to m equally spaced doses (x1=i/(m+1), i=1,...,m) and find the estimated ED50. For convenience , we will adopt the following to describe the experiments: NOnm : non-adaptive method assigning n subjects to each m doses. (Q =2, one-step). The fixed doses and estimated ED50 of all possible outcomes 48 Fig. 3.7 The r.e. of Anm/A16, m=1,2,3, L=6 -4- A61/A16 A32/A16 220 see 140 lee 60 0.01 0.1 10 100 d Fig. 3.8 The r.e. of Bnm/B16, m=1,2,3, L=6 Bsi/Bis -4- 1332/1316 170 150 130 I; 118 C. 90 70 50 0.01 0.1 s d 10 see 49 Fig. 3.9 The r.e. of Anm/A112, m=1,2,3,4,6, L=12 -+ 800 A121/A112 A62/A112 .94#1.41-2 -a' 04042 i=i8e/ii112 600 I 400 200 0 0.01 0.1 100 10 d Fig. 3.10 The r.e. of Bnm/B112, m=1,2,3,4,6, L=12 -+ 180 A -a 150 834/"12 026/6112 ... ... .... 8121/8112 B82/8112 B43/BiL2 .......... **if- -"/:!' 120 '449 oct - : -0 -04: 44Kx*--4(-4-01 98 L .. - 89 * .... 30 0 0.01 8.1 1 d 10 100 50 for NO16, NO23, NO32, and NO61 are shown in the Appendix. The best design of the non-adaptive method is NO61 for d-+1; otherwise, NO16 is the best (see Fig. 3.11). The NO61 design will be compared with other methods for estimating ED50 for d-a in section 3.7; otherwise, NO16 will be used. 3.3.1 Comparisons of Non-adaptive Method with Adaptive Methods NO61 will be compared with B61 for d-l. will be compared with NO16 for d+1. NO61 A32 and A23 Comparing the r.e., is more efficient than the B61 design for d-41; otherwise, A23 and A32 dominate the NO16 design (see Fig. 3.12). 3.4 Spearman-Kirber (Non-parametric) Method The Spearman-Kdrber estimator estimator of the ED50. is a non-parametric If the levels are ordered such that xi<...<xm, this estimator is defined by mx-.1 (Pi +1-P1) (xi+x1 +1) 2 (3.37) provided that P1=0 and Pm=1, where Pi=si/ni, ni is the number of the observations and si is the number of the positive responses at dose xi, i=1,...,m. If P1>0, then an extra level is added below x1, where no responses are assumed to occur. Similarly, if Pm<1, an extra level is added above xm, where responses are assumed to occur. The levels are assumed to be equally spaced and nin, i=1,...,m. So, we will have n1 =6, 3, and 2 possible experiments and the test 51 Fig. 3.11 The r.e. of NOnm/N016, m=1,2,3, L=6 --- NO61/N016 -4NO32/N018 6 200 160 120 L 80 40 0 0.01 0.1 1 10 100 d Fig. 3.12 The r.e. of B61/N061, A32/N016, A23/N016 -+- B81/N081 A32/N016 400 300 U 200 C. 100 0 9.91 0.1 3. d 10 100 52 dosage levels x1=i/(m+1), i=1,..,m. For convenience, we will adopt the following to describe the experiments: SKNn Spearman-Kdrber methods for ni=ne(2, 3, 6). : The fixed doses and the estimated ED50 of all possible outcomes for SKN6, SKN3, and SKN2 are shown in the Appendix. SKN6 has smaller mse when compared with SKN2 and SKN3 when the prior is close to the true potency curve (d-,1) (see Fig. 3.13). SKN6 is more efficient for d-,1; otherwise, SKN2 is more efficient. The SKN6 design will be compared with the other methods for estimating ED50 when d-+1 in section 3.7; otherwise, SKN2 will be used. 3.4.1 Comparisons of Spearman-Kerber Method with Adaptive Methods SKN6 will be compared with B61, compared with Anm for n=2, 3. and SKNn will be Comparing the r.e., SKN6 is more efficient than the adaptive B61 design for d-+1; otherwise, A23 and A32 are more efficient than the SKN2 and SKN3 designs respectively (see Fig. 3.14). 3.5 Up-and-down (Staircase) Method The up-and-down method is another non-parametric method for estimating ED50. sequentially. The dose levels are determined A series of test dose levels is chosen with equal spacing between doses. The first level should be chosen as near as possible to the ED50. Then, a series of 53 Fig. 3.13 The mse of SKNn, n=2,3,6 -4- SKN6 SKN3 0.1 0.08 0.06 8 p E 0.04 0.02 a 0.01 0.1 1 180 10 d Fig. 3.14 The r.e. of B61/SKN6, A32/SKN3, A23/SKN2 -4- 861/SKN6 A32/SKN3 600 400 300 U L. 200 100 e 0.01 0.1 i d 10 lee 54 trials increasing the performed, is dose following a negative response and decreasing the dose following a positive response. The estimated ED50 is Xf+kD, where Xf is the last dose administered, k is a value from the provided table (Dixon, 1965), and D is the interval between doses. In this example, an experiment is conducted on six subjects. We will choose x1=0.5, which is close to the true ED50 for d close to 1. Since the true potency curve is assumed to be P(x)=xd, d>0 and (:))cl, the D value (dose interval) should be chosen in (0, .075) such that all doses and ED50 lie in (0, 1). Three values of De(.001, .035, .075) are chosen in computing the exact distribution of the ED50. For convenience , we will adopt the following to describe the experiments: UDq : up-and-down method using cle(001, 035, 075) as dose interval. The fixed doses and the estimated ED50 of all possible outcomes for UD001, and UD075 are shown in the UD035, Appendix. UD001 has smaller mse when compared with UD035 and UD075 for d-41 (see Fig. 3.15). UD001 is more efficient for d-41; otherwise, UD075 is more efficient. Since D is .001, the fixed doses and estimated ED50 are all close to 0.5 for all 64 outcomes. Also, UD001 is more efficient for d-)1, but extremely less efficient for d#1. however, is not realistic. This extreme case, So the UD035 will be used to 55 Fig. 3.15 The mse of UDq, q=001, 035, 075 -+- U0991 UD035 9.25 9.2 0.15 a N E 0.1 0.05 9 0.01 0.1 1 lee 10 d Fig. 3.16 The r.e. of B61/UD035, B61/UD075 261/UD035 -I- E161/UD075 409 300 I; 200 C. 100 e 0.01 0.1 1 d 10 lee 56 compare with other methods for estimating ED50 for d-41 in section 3.7; otherwise, UD075 will be used. 3.5.1 Comparisons of Up-and-down Method with Adaptive Methods Comparing the r.e., UD035 is more efficient (UD075 is less efficient) than the B61 design for d -+1, and UD035 and UD075 are less efficient than the A23 and A32 designs for d#1, but UD075 is more efficient than A23 and A32 designs when d is extremely small (d<.003) or large (d>10) (see Fig. 3.16 ,...3.18). 3.6 Robbins-Monro Process The Robbins-Monro stochastic approximation process is used in sequential experiments to estimate the ED50. To start the experiment, an initial guess xi is made at the ED50, and n1 subjects are given the dose x1. have positive responses and pi=si/ni is If si subjects the proportion response, a second group of n2 subjects is tested at the dose level x2=x1-c(p1 -.5). More generally, the dose level at which the (r+l)th group of subjects is tested is found from xr by = (P1-4) (3.38) where c is a suitable chosen constant. We will let x1=0.5 (the prior ED50) and choose c such that all the tested doses and ED50 are in [0,1]. The experimenter conducted on six subjects resulting in n1 =6, 3, 57 Fig. 3.17 The r.e. of A32/UD035, A32/UD075 A32/U13836 -4- A32/UD076 1699 1600 1200 908 L 600 300 0 0.01 0.1 1 100 10 d Fig. 3.18 The r.e. of A23/UD035, A23/UD075 -4- A23/UD035 A23/U0876 1599 1200 900 U 600 300 0 0.01 8.1 1 d 19 108 58 2, and 1 different experiments to be examined by using the Robbins-Monro process. The appropriate c values for the different n1 are listed in Table 3.3. For convenience, we will adopt the following to describe the experiments: RMnCc : Robbins-Monro process for ni=n and constant c (see Table 3.3). Table 3.3 The values of c for n1=6, 3, 2, and 1 such that all the tested doses and ED50 are in [0,1] ni=6 ni=3 ce(0,1) cc(0,2/3) n1=2 c(0,.5454) ni=l c(0,.4082) The following examples of Robbins-Monro methods are used in this section. RM6C0 RM6C5 RM6C10 RM3C0 RM3C3 RM3C6 RM2C0 RM2C2 RM2C5 RM1C0 RM1C2 RM1C4 n1 =6 n1 =6 n.=6 n.1 =3 n.1 =3 n.1 =3 n1 =2 n1 =2 n-=2 n.1 =1 n1 =1 n1 =1 c=.001 c=.5 c=1 c=.001 c=.333 c=.667 c=.001 c=.25 c=.5454 c=.001 c=.2 c=.408 The fixed doses and estimated ED50 of all possible outcomes for the above examples are shown in the Appendix. Fig. 3.19 ~3.22 indicate that RMnC0 for fixed n is more efficient for d-,1 but extremely less efficient for d#1, and so is excluded from the comparisons. RM6C10 has the smallest mse when compared with RM1C6, RM2C5, and RM3C6 for d#1. RM2C2 has the smallest mse when compared with RM1C2, RM3C3, and RM6C5 for d -+1 (when .7d51.5), but rose's of all 59 Fig. 3.19 The mse of RM1Cc, c=.001, .2, .408 -4- RM1C0 RM1C2 0.25 0.2 0.15 U E 0.1 9.95 e 0.01 0.1 10 199 d Fig. 3.20 The mse of RM2Cc, c=.001, .25, .5454 -4- RM2C0 RM2C2 0.25 0.2 0.15 U U 0.1 0.05 0 0.01 0.1 1 d 10 100 60 Fig. 3.21 The mse of RM3Cc, c=.001, .333, .667 -4- RM3C0 RM3C3 0.25 0.2 0.15 II U E E. 1 0.95 e 0.01 8.1 1 10 109 d Fig. 3.22 The mse of RM6Cc, c=.001, .5, -- 1 RM6C0 RM6C5 0.25 8.2 0.16 S U E 8.1 0.06 0 0.01 0.1 1 d 10 199 61 four are similar. For RM1Cc designs, there are 6 fixed doses sequentially chosen, making them more comparable with adaptive designs. methods for So, the RM1C2 will be compared with other estimating ED50 for d -+l in section 3.7; otherwise, RM6C10 and RM1C4 will be used for dill.. 3.6.1 Comparison of Robbins-Monro Process with Adaptive Methods Comparing the RM6Cc method with the B61 design for d-41, RM6Cc is more efficient for small c, but less efficient for large c (see Fig. 3.23). Comparing RMnCc (n=2, 3) with the Anm design for d4,1, RMnCc is less efficient than Anm design for small c, but more efficient for large c (see Fig. 3.24, 3.25) . Comparing the higher efficiency of the Robbins-Monro method with adaptive designs, RM1C2 is more efficient than B61 for d-,1, and RM6C10 and RM1C4 both are more efficient than the A23 and A32 designs for d+1 (see Fig. 3.26). Robbins-Monro process methods The is more efficient than adaptive in comparing the uniformly optimal cases with respect to each method. In the Robbins-Monro process and the previous up-and- down method, estimation the ED50 depends on the initial chosen dose, x1, and the constants, c and D. This results in making them more difficult to use than the other methods. 3.7 Comparisons 62 Fig. 3.23 The r.e. of B61/RM6Cc, c=.5, -+. 1 561/RM6C5 861/RM6C10 300 250 280 S 150 100 50 e 6.01 0.1 1 lee Le d Fig. 3.24 The r.e. of A32/RM3Cc, c=.333, .667 -4- A32/RM3C3 A32/RM3C6 1280 1000 800 S I: 600 498 280 e 0.01 0.1 i d 10 190 63 Fig. 3.25 The r.e. of A23/RM2Cc, c=.25, .5454 A23/RM2C2 A23/RM2C6 1280 1000 600 a 600 488 200 0 0.01 0.1 1 109 10 d Fig. 3.26 The r.e. of B61/RM1C2, Anm/RM6C10, Anm/RM1C4, m=2,3, L=6 -._4- B61/RM1C2 A32/RM6C10 10 390 000041b4 A2#/R01$4 260 200 160 L 100 50 0 0.01 0.1 1 d 10 100 64 The best designs for the adaptive methods have been compared with non-adaptive, Spearman-Kdrber, up-and-down, and Robbins-Monro methods in previous sections. Since the complexities of comparing other methods with up-and-down and Robbins-Monro methods are many, these comparisons will be discussed in two parts. For d-,1, we would like to compare {B61, NO61, SKN6, UD035, RM1C2). For d#1, we would like to compare {A23, A32, NO16, SKN2, UD075, RM6C10, RM1C4). All the comparisons are based on the r.e. of the chosen designs relative to the NO16 design (see Fig. 3.32 and Fig. 3.37). The individual r.e. plots of the chosen compared cases for d-fl are shown in Fig. 3.27 UD035 and RM1C2 have the highest efficiencies when d=1, but the efficiencies decrease quickly (become lower efficiency) when d is shifted from 1 (see Fig. 3.32). UD035 and RM1C2 have the steepest curves, demonstrating more variability in their relative efficiencies than the others. SKN6 and NO61 have higher efficiencies than B61 for d-41 (see Fig. 3.32). The individual r.e. plots of the chosen compared cases for d#1 are shown in Fig. 3.33 Both RM6C10 and RM1C4 dominate the other cases (see Fig. 3.37). Fig. 3.34 indicates that SKN2 is the least efficient when the prior modal function is far away from the true model (d+1). r.e. of UD075 is less than 100% when dc(.08, .6) 3.36). The (see Fig. UD075 is more efficient than A23 and A32 when d is extremely small (d<.05) or large (d>9); otherwise, A23 and 65 Fig. 3.27 The r.e. of B61/N016 Fig. 3.28 The r.e. of N061/N016 1.7e 298 150 160 139 120 U L 89 90 C. 49 "re 60 ..... ... ..... . 1.11:1 0.01 0.1 1 10 .. : .11 0.01 100 ........ 0.1 d ..... ,11 1 10 100 d Fig. 3.29 The r.e. of SKN6/N016 Fig. 3.30 The r.e. of UD035/N016 699 608 480 1300 L 200 100 t-N14;i^. 8 0.01 0.1 1 d Fig. 3.31 The r.e. of RM1C2/N016 250 200 169 100 50 e 0.01 0.1 1 d 10 100 10 100 99 qqd ZVE ST.UL 91 '9NNS Jo '9TON/XX 'T9G=XX 'T90N 'gum ZDIW 9TON/T99 +- 9TON/T9ON 9 009 9T 9T SOS 00V 00C 5 see ear 0 *0 TO 0 T OT ØØT 67 Fig. 3.33 The r.e. of Anm/N016, m=2,3, L=6 A32/N016 -4 Fig. 3.34 The r.e. of SKN2/N016 A23/N016 240 171 218 151 180 /1.1.131 111 120 98 0.01 91 9.1 lee 1 0.01 0.1 d 1 10 100 d Fig. 3.35 The r.e. of RM6C10/N016, RM1C4/N016 Fig. 3.36 The r.e. of UD075/N016 RM6C10/N016 -+ RM1C4/N016 1500 500 1200 408 900 300 I. 600 280 300 lee 0 0 0.01 8.1 1 d 10 108 0.01 0.1 1 10 100 68 Fig. 3.37 The r.e. of XX/N016, XX=A32, A23, SKN2, UD075, RM6C10, RM1C4 A32/N016 A23/N016 -41 I i 1 I I 1 1 1 1 1 ink 360 ... AkNge4,4Q16 240 180 U *.1 120 60 0 8.81 0.1 1 d 10 100 69 A32 are more efficient (see Fig. 3.37). Since the Spearman- Kdrber and non-adaptive methods are less efficient for d41, and the Robbins-Monro and up-and-down methods demonstrate more variability in estimating the ED50, the adaptive designs A23 and A32 are more consistently efficient. The Spearman-Kdrber estimator, Robbins-Monro process, and up-and-down method are designed for estimating the ED50. They cannot be used to estimate the potency curves. The adaptive designs cannot only be used to estimate the ED50, but also can be used to estimate the potency curves. 70 4 NORMAL APPROXIMATION METHOD TO ESTIMATE THE ORDER OF THE AUTOREGRESSIVE (AR) MODEL UNDER BAYESIAN POINT OF VIEW 4.1 The Bayesian Approach to Order Estimation of AR Process Let v. be the prior probability that the order of a stationarity autoregressive time series is j (j=0,1,...,M) such that E vi=1, where M is the maximum order of the AR model. Let Xn:=(Xl, Xn) ' be a vector of n consecutive observations and 90e=(91,...,9m) autocorrelations, from a stationary AR(p) unknown. be a vector of partial model with p The joint density of X, p, and 0 (Robb (1980)) is given as 41,1:40(Zni j 41)//) = Gn II m 2-3 [ k=j+1 8 (9k) ] [ II -7:=0 (1(PD 2] [2-1Km(pm) n (4.1) where __n 2 r (yn) Gn = (2v) (n+3) Yn 2 (p0 s 0 M II 8 (tpk) E 1 k=14+1 (4.2) 6() is the Dirac delta function and Km(%) is defined as (1.37). From (4.1), Robb (1980) expressed the marginal posterior probability density of the order given the data as 71 ff1 1 4, (in, chpi 'Pm) cl(Pm (2En, k, (pm) dcpm k=0 civ1 1 n+3 r i (1-4)1) Ki ( gi) chpi 2 chpi n+3 1: k=o - 4 (9 k) (1-91)1] -1 nic2-jc[II i=0 1 2 dVk dV1 I E Ik k=0 (4.3) where 1 = n+3 1 -I ICk2-ic (1-91)-511c(1Pk) 2 thp chpi . (4.4) The Bayes estimator is used to minimize the Bayes risk with respect to the loss Robb chose function. the particular loss function as: L(0, a) = 0 = 1 if e=a (decision is correct) otherwise (decision is wrong) . (4.5) The Bayes risk is defined by R(0, 8) = E( L(0,8(2))] = f F(8,1) dlix (4.6) where F (a, I ) f(X,O) = fe L(e, a) f(.7f, 0) do (0) . is the density of X given 0, (4.7) v(0) is the prior probability distribution for 0, and x and 6 are the domain 72 of X and 0, respectively. minimizing F(6(8), X). F(L.in) = E So, R(0, 6) is minimized by In the present case, we have L(k,j) f(Jrn,k)Irk k=0 L(k,j) [f(27,,;k)/nk]uk k=0 = E L(k,j) k=0 = krj E 1k (4.8) for some je(0, 1, ..., M). If j is chosen to be the integer between 0 and M such that I. is a maximum, the function F(j,8n) is minimized and j should be a Bayes estimator of the order p. Robb derived the approximated posterior probability of the order given data to simplify the multiple integration in (4.4). And Robb wrote (4.3) as Itpir(i lira) 7C.12-i (21c/ (2yn+1) i+1 1 32[ 2 1=1 kk Enk2-k[2n/(2yn+1] 2 H k=0 (1-91) II (4.9) 2 .1=0 where (ei is the approximated mle of p1. One way to deal with the multiple integrations in (4.3) is to use the closed Newton-Cotes integration formulas (Burden (1981)) to approximate Ij in (4.4). the closed Newton-Cotes formulas is in The boundary of (-1, quadrature formula for Newton-Cotes is given as 1]. The 73 Ef (x) dx z E ci f (xi) (4.10) where Ci and xi (1=1, N) are the weight coefficients and the roots of the function, respectively. In (Burden, 1981), we can find the corresponding Ci and x. for N up to 5. With Newton-Cotes closed formula, we have /k = 7C k 2 -k E N . . . E {C1i ii=0 2 cik (3.-(pid 21 k (1-(pL)7KkOpii, ..., (pi) for k=1, ..., M. . ik.° -( n4.3) 2 (4.11) } In general, the answer is accurate enough if N=3 because the degree of precision is up to (2N-1) for Newton-Cotes closed formula. To deal with the multiple summations is still a big problem because we have to run Nk iterations to get the final answer and Kk(tpk) is difficult to calculate. It takes a very long time to get the answer if k is large even with modern computers. In the following section the normal approximation method will be applied again to solve the computation problem mentioned above. 4.2 Normal Approximation Approach The marginal probability density of order p given the data is shown as (4.3). Ik= ji. il f ri k (fp k ) The Ik in (4.4) can be expressed as k41 (4.12) where 74 -(n+3) fk(+11 f(pk) = 7tk2-k [11 (1 -(p j) 2] Kk(9k) 1=0 2 (4.13) To apply the normal approximation we will approximate fk(9k) by a constant Ck multiplied the multivariate normal density function of ifk with mean c and covariance E* and express as f k (9 k ) fk ((Pi' (Pk) Ck MVN(111k; op*, E*) k -1 Ck(±) 71E* I2- exp{--21 271 (,,*) Es" (9-9*)1 (4.14) where 9* has to be satisfied with = affik (4.15) and -1 -a2logfic(9k) E* 1( a9 &pi )idtp. (4.16) Substitute 9* into (4.14) and get _1 k fk(11)*) E* I C k (+; ) 2 (4.17) Substituting (4.16) into (4.17), we can find -1 Ck fk(C) (2 a) -a2logfk(4pk) Ck as 1 2 2 [( a(Pkavi (4.18) From (4.12) and (4.14) we have 75 Ik p = i pi Li fk (4x) dq)k chPi mvN(Ipk; "% Es) dpk Ck d(pi. = Ck (4.19) The multiple integrations of Ik has been simplified and approximated only by a constant Ck in (4.19). So we can approximate (4.3) as C 'Piz(' f. (i=o, M E Ck . . . , (4.20) k=0 where C k is given in (4.18). However, before approximating Ik by Ck. used here to find 9* and Z. Ui = alogfk(pk) api dUij The Newton-Raphson method is Define (1=1, . . . , k) a Icopkd n+3 (4.21) ' 2(9k) 1-1 , and E* are needed 1Cic a2 log fk (tpk) acpiacpi i (1+(p1) (1_91) 2 + n+3 2 Kk(41$k) (n+3) [ [ a2 vlopk,, a(pi.,...k a 4.k re-%.ric, (, \ i=j 2Kk (4k) ' °, i 24 (9k) , a2 (n+3) a(PiU(Pi n+3 21(k(f p 1 (4.22) gki a 41..k w.f.., %Irk, v tin --k kil ij . oc) In order to obtain the first and second derivative of Kk(tpk) 76 with respect to we we need to express all of the functions of 9k in terms of O's. From (1.34) and (1.37), we have Kk (41k) = Hk (0k) (4.23) 1, kDke1, k Applying chain rule we obtain a k. ---=( 2 D I 8 1 . K (9 k ) (4.24) where aelk a9, Dk* (aek,i _ is same as Dk (4.25) without the first row and 01,k = (1, 0k,1 The expressions Oksi (j=1, ek,k) k) in terms of 9 is shown in (1.32), i.e., ek,k = Ok 0 0 k-1, j fk°k-1,k-j (j=1, k-1) Therefore, each element in (4.25) can be found as aek,, _ aek-1,m _A aok-i,k_m s'k.k k-1) (4.26) aek,, uk-1,k-m avk (m=1, ..., k-1) (4.27) aok,k _ 0 ay, a ek,k (i,m=1, (i=1, k-1) (4.28) 1 a (Pk Differentiate (4.24) and (4.25) and get (4.29) 77 a2 ) 414; alEk * r aoia9i L2/21,01, ki + [2 D*k* c#3° (4.30) aqvk aPe ( a2eLl . a(piapj Lk (i,J=1,...,k) a(Pia9.1'...- &Piaci (4.31) where Dk** are same as Dk without the first row and the first column of Dk. Similarly, we can express each element in (4.31) as aNkm a2ek-1,m 4i4j a2ek,m _ a2ok,rn aq) jay a2ek,n, 439 jag) 89, (i,j=1,2, - 0 41 a20k-1,k-m _ (4.32) aok-i, 4payi .3914k a213k, k, k aq, jag, (4.33) k-1) (4.34) for m=1, ..., k-1 and "" 424, for m=k. 0 (i,j =1, ..., (4.35) Let 9 = (91, cd u (4.36) dU = [dUu] (i,j=1, k) . The mode 9* can be found by using Newton-Raphson method shown as (pro = yr - U(4r) de (yr) for (r+1) to iteration. (4.37) From (1.43) we can evaluate the least 78 square estimates 13*=(0 p1 * . . . ,0 *) which will be used to choose the initial value of cp, i.e., 0* = [D "Yid (p=1, 1.4 = ((Qi, In (4) I r =0 = (4.38) k) u1,1 * (4.39) ekA) If the sequence converges, say, to 9*, then (1)*=((p1 *, is the mode. ,ck*) Substituting e* into (4.22), we can solve for E*, i.e., E* = d0) -11 (4.40) according to (4.16) and (4.25). Once we obtain 9* and E*, C k can be calculated from (4.13) and (4.18), i.e., Ck = IC k2-Ic{k IT (1- (C)2) i Kk(r) 2 -(n+3) 2 k 1 (270 21E4.12 i=0 4.3 (4.41) Examples for Wolfer's Sunspot data Wolfer's sunspot data consists monthly means of daily relative sunspot number which are based upon counts of spots and groups of spots beginning in 1749. The yearly means of sunspot data observed in 176 consecutive years which can be found in most of time series analysis books. current data is collected by observatory from 1749 to 1977. the Tokyo The most Astronomical We transform the data by taking square root of this sunspots data from 1749 to 1924 corrected for the mean. to comparing each other. The following methods will be used Akaike's future prediction error (FPE) and information criterion (AIC), Schwarz's Bayesian information criterion (BIC) and Hannan and Quinn's 79 information criterion (CIC), Robb's Bayes estimation of the order and the Bayesian normal approach all choose a maximum order M=15 to estimate the order of AR time series. For Robb's Bayes estimator of order and the Bayesian normal approach, let /7)=1/16, j=0,1, function as (4.5). ..., 15 and define the loss The estimation criteria for AR order are list as following. FPE(p) = min/FPE(j) = AIC(p) = minIAIC(j) = BIC(p) = minIBIC(j) CIC(p) = minICIC(j) InRobb (p) = max n +j+1R nj1 j = 0, 1, 1nRi + 2j n I j = 0, 1, ..., M} = 1nR. + i inn .7 = + j lnlnn 1nR n .7 iiii} -1 j = 0, 1, ..., MI 1 I j .7 = 0 , 1, M 1 1 Ail, 1 Ii pix(jlin) . . . ..; = 0, 3., ... ,m E 1k k=0 Normal (p) = max pix( j lin) = mCi E ck I j = 0, 1, . . . ,M kO where R. (1.44) is the role of the variance a2 from a model J with j parameters estimated and rpfx(ji Xn) are estimated by (4.9) and Cj can be calculated from (4.41). The estimation results of analyzing the transformed sunspot data from these methods is given in Table 4.1. Akaike's FPE and AIC both have the absolute minimum value at 80 the 9th order but Schwarz's BIC, Hannan and Quinn's CIC and Robb's and the Bayesian normal approach all have the same estimated order at the 2nd order, which means all the consistent estimators for order yield the same results. The asymptotic results of Schwarz Bayesian criterion do not depend on the prior distribution and our Bayesian normal approach has the same results as Schwarz's BIC results and both put very large weights on the 2nd and 3"1 orders. The closed Newton-Cotes method mentioned in section 4.1 is very accurate, but the running time is very much. It is good to compare this method with the normal approximation method for M=12 and n=3. The results is shown in Table 4.2 Both methods have the same results that the maximum posterior probability of the order is at j=2. However, the running time of the normal approximation approach is much less than the Newton-Cotes method. Consider the most current sunspot data collected from 1749 to 1977. By using FPE, AIC, BIC, CIC, and Bayesian normal approach to analyze the mean corrected square root of the yearly averages (the maximum order M=15), the results is shown in Table 4.3 and plot of the data is given in Fig. 4.1. The best fitted AR model is the 9th order for the most current transformed sunspots data for all criteria. FPE, AIC, BIC, and CIC do not give full posterior results, but the Robb's and normal approximation approach do. 81 Table 4.1 The results of analyzing Wolfer's sunspot data for 1749-1924 using FPE, AIC, BIC, CIC, Robb, and normal approximation metnoa ror rne oraer p 701(01 Xn) j FPEJ . AICJ . BIC. CIC. J J Robb Normal 0 5.3565 1.6669 1.6669 1.6669 .0000 .0000 1 1.7905 0.5711 0.5891 0.5784 .0000 .0000 2 1.0395 0.0273 0.0633* 0.0419* .7677^ .6678^ 3 1.0383 0.0262 0.0802 0.0481 .2070 .2793 4 1.0496 0.0370 0.1091 0.0663 .0204 .0272 5 1.0584 0.0454 0.1354 0.0819 .0024 .0042 6 1.0535 0.0407 0.1487 0.0845 .0008 .0018 7 1.0371 0.0249 0.1511 0.0761 .0008 .0053 8 1.0295 0.0177 0.1618 0.0761 .0000 .0023 9 1.0115* 0.0000* 0.1621 0.0658 .0000 .0107 10 1.0201 0.0834 0.1885 0.0814 .0000 .0011 11 1.0276 0.0157 0.2138 0.0960 .0000 .0002 12 1.0394 0.0270 0.2432 0.1147 .0000 .0000 13 1.0511 0.0381 0.2723 0.1331 .0000 .0000 14 1.0508 0.0378 0.2899 0.1401 .0000 .0000 1.0627 0.0489 0.3192 0.1586 .0000 'A': indicates that the value is maximum. '*': indicates that the value is minimum. .0000 15 82 Table 4.2 j The results of analyzing Wolfer's sunspot data for 1749-1924 from the closed Newton-Cotes (N=3) and Bayesian normal approximation method for choosing the maximum order M=12 closed Newton-Cotes Normal 0 0.0000 0.0000 1 0.0000 0.0000 2 0.5556* 0.6678* 3 0.2469 0.2793 4 0.1098 0.0272 5 0.0488 0.0042 6 0.0217 0.0018 7 0.0096 0.0053 8 0.0043 0.0023 9 0.0019 0.0107 10 0.0008 0.0011 11 0.0004 0.0002 12 0.0002 '*': indicates that the value is maximum. 0.0000 83 Table 4.3 j The results of analyzing Wolfer's sunspot data for 1749-1977 using FPE, AIC, BIC, CIC, and normal approximation method for the order p assumed the maximum order M=15 FPE. AICJ . BICJ . J CIC.J 701E01 Xn) 0 6.3096 1.8333 1.8333 1.8333 0.0000 1 2.0921 0.7294 0.7444 0.7355 0.0000 2 1.1353 0.1182 0.1482 0.1303 0.0022 3 1.1308 0.1142 0.1592 0.1324 0.0009 4 1.1408 0.1229 0.1829 0.1471 0.0000 5 1.1440 0.1258 0.2008 0.1561 0.0000 6 1.1109 0.0964 0.1864 0.1327 0.0000 7 1.0879 0.0755 0.1804 0.1178 0.0006 8 1.0634 0.0526 0.1726 0.1011 0.0011 9 1.0088* 0.0000* 0.1349* 0.0544* 0.9109 10 1.0173 0.0084 0.1583 0.0689 0.0769 11 1.0261 0.0169 0.1819 0.0835 0.0066 12 1.0349 0.0255 0.2054 0.0980 0.0006 13 1.0439 0.0341 0.2290 0.1127 0.0000 14 1.0392 0.0295 0.2394 0.1142 0.0000 15 1.0479 0.0378 0.2627 0.1285 'A': indicates that the value is maximum. '*': indicates that the value is minimum. 0.0000 ., Fig. 4.1 Mean corrected of the square root of yearly averages of sunspots data 1749-1977 0 50 100 150 200 85 CONCLUSIONS 5 In Bayesian analysis, means are commonly used to summarize Bayesian posterior distributions. a large number of parameters, Problems with often require numerical integrations over many dimensions to obtain means. In this dissertation, posterior modes with respect to appropriate measures were distributions. used to summarize Bayesian posterior Two statistical estimation problems were investigated here. These were the sequential dose selection in bioassay, and the selection of the order of an autoregressive model. First, for Bayesian bioassay, two adaptive designs were developed for sequential dose selection to estimate the potency curve by using posterior modes. The first was a full information method employing the full likelihood for all collected doses and using a full prior distribution to obtain modes and estimate the potency curve. the reduced information method for The second was simplifying complexity of the full information method. the In this second procedure, the Dirichlet prior was modified by updating the prior parameters in each step. Modes were obtained at experimental doses in each step, so the full modal potency curve was determined according to these modes and the previously estimated potency curve. The relative efficiencies of the adaptive designs for estimating the ED50 were compared. For prior guess 86 close functions to the true function, the reduced information method involving assignment of subjects to doses close to the ED50, is more efficient. For prior guess functions which are not close to the true function, the full information method of choosing nearly equal numbers of doses and steps is more efficient. A comparison of the relative efficiencies of the adaptive designs with other non-Bayesian methods (SpearmanKarber, up-and-down, and Robbins-Monro) shows that the full information is appropriate for estimating the ED50 when the prior guess function is not close to the true function. The reduced information method is less efficient than other methods for estimating the ED50 when the prior guess is close to the true function. These non-Bayesian methods were designed for estimating the ED50 only, while the adaptive designs were designed for estimating both the ED50 and the potency curve. Second, determination of the order of an autoregressive model following Robb's method marginal posterior considered. (1980) probabilities of by evaluating the the order was The normal approximation method was used to approximate a function in the posterior density such that the integrations simplified. over many dimensions problem was This method was compared with other methods (FPE, AIC, BIC, and CIC) by choosing Wolfer's sunspot data an example. FPE, AIC, BIC, and CIC were developed to 87 estimate the order of an autoregressive model. In contrast to Robb's method and the normal approximation approach, these methods do not give full posterior results. Bayesian methods (Robb's, BIC, All the and normal approximation approach) have the same estimated order. For further inference, approximate posterior distributions can be based on the multivariate normal distribution. 88 BIBLIOGRAPHY 1. Akaike, H. (1969), "Fitting Autoregressive Models for Prediction," Annals of the Institute of Statistical Mathematics, 21, 243-7. 2. Akaike, H. 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Johnson, R.A.(1967), "An Asymptotic Expansion for Posterior Distributions," Ann. Math. Statist, 38, 18991907. 26. Johnson, R.A. (1970), "Asymptotic Expansions Associated with Posterior Distributions," Ann. Math. Statist, 41, 851-64. 27. Kotz, S., Johnson, N.L., Read, C.B. (1981), Encyclopedia of Statistical Sciences, 4, 354-7, Wiley 90 Interscience. 28. Kotz, S., Johnson, N.L., Read, C.B. (1981), Encyclopedia of Statistical Sciences, 7, 503-5, Wiley Interscience. 29. Kraft, C.H. and Van Eeden, C. (1964), "Bayesian Bioassay," Ann. Math. Statist, 35, 886-90. 30. Kuo, L. (1983), "Bayesian Bioassay Design," Ann. Statist., 11, 886-95. 31. Kuo, L. (1988), "Linear Bayes Estimators of the Potency Curve in Bioassay," Biometrics, 75, 91-6. 32. Lindley, D.V. (1965), Introduction to Portability and Statistics from a Bayesian Viewpoint, Part 2, Inference, Cambridge University Press. 33. Little, R.E. (1974), "A Mean Square Error Comparison of Certain Median Response Estimates for the Up-andDown Method with Small Samples," Journal of the American Statistical Association, 69, 202-206. 34. Lutkepohl, H. (1985), "Comparison of Criteria for Estimating the Order of a Vector Autoregressive Process," Journal of Time Series Anal., 6, 35-52. 35. Press, J.S. (1989), Bayesian Statistics, Wiley Interscience. 36. Ramsey, F.L.(1972), "A Bayesian Approach to Bioassay," Biometrics, 28, 841-58. 37. Ramsey, F.L.(1974), "Characterization of the Partial Autocorrelation Function," Annals of Statistics, 2, 1296-1301. 38. Rissanen, J. (1978), "Modeling by Shortest Data Description," Automatica, 14, 465-71. 39. Robb, L.J. (1980), "Estimation of the Order of an Autoregressive Time Series -- A Bayesian Approach," Ph. D. Dissertation, Oregon State University, Corvallis. 40. Robertson, T., Wright, F.T., Dykstra, R.L. (1988), Order Restricted Statistical Inference, Wiley. 41. Schwarz, G. (1978), "Estimating the Dimension of a Model," Ann. Stat, 6, 461-64. 42. Shibata, R. (1976), "Selection of the Order of an 91 Autoregressive Model by Akaike's Information Criteria," Biometrika, 63, 117-26. 43. Wetherill, G.B. (1963), "Sequential Estimation of Quantal Response Curves," Journal of the Royal Statistical Society, B, 25, 1-48. 44. Wilks, S.S. (1962), Mathematical Statistics, Wiley, New York. APPENDIX 92 The fixed doses and the estimated ED50 for 64 possible outcomes when L=6 (L=m*n) for Anm and Bnm designs. Al6=B16 X1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 1 1 0 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 X2 X3 X4 X5 X6 ED50 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.88088 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.75466 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.70695 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.62746 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.80740 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.59947 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.54918 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.84868 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.70227 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.61619 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.58150 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.42056 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.40795 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.37254 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.86009 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.72231 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.64861 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.57944 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.67704 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.46987 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.40053 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.72269 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.41513 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.29773 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.38546 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.27769 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.27154 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.24534 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.86314 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.72846 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.66341 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.59205 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.71972 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.53013 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.45082 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.75553 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.58487 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.38381 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.45005 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.35139 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.33659 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.29305 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.77069 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.61454 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.54995 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.41850 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.32296 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.28028 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.19260 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.50000 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.27731 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.24447 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.15132 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.22931 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.13991 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.13686 0.14286 0.28571 0.42857 0.57143 0.71429 0.85714 0.11912 93 A23 S X1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 1 1 1 0 1 1 0 0 0 0 1 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 0 1 1 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 0 1 1 0 1 1 1 0 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 0 0 1 1 1 0 1 0 1 1 0 1 1 1 0 0 0 0 0 0 0 0 1 1 1 0 1 0 1 0 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 X2 X3 X4 X5 X6 ED50 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.91389 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.81711 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.80461 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.75612 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.89677 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.79034 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.72100 0.25000 0.50000 0.75000 0.52778 0.78395 0.89198 0.59958 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.73701 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.64491 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.59235 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.54288 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.72158 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.60265 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.52031 0.25000 0.50000 0.75000 0.39938 0.59347 0.72942 0.41999 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.84712 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.69663 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.59456 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.46488 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.74798 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.52913 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.43092 0.25000 0.50000 0.75000 0.31404 0.55246 0.84208 0.31239 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.58001 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.45712 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.39735 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.35509 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.47969 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.40765 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.27842 0.25000 0.50000 0.75000 0.27058 0.40653 0.60062 0.26299 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.87042 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.75936 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.70830 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.56017 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.80182 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.65353 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.53717 0.25000 0.50000 0.75000 0.20833 0.66667 0.86111 0.34171 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.68761 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.53512 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.47087 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.30337 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.56908 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.40544 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.25202 0.25000 0.50000 0.75000 0.15792 0.44754 0.68596 0.15288 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.65829 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.43983 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.34647 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.24064 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.46283 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.29170 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.19818 0.25000 0.50000 0.75000 0.13889 0.33333 0.79167 0.12958 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.40042 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.24388 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.20966 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.18289 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.27900 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.19539 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.10323 0.25000 0.50000 0.75000 0.10802 0.21605 0.47222 0.08611 94 A32 S X1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 1 1 1 0 1 0 0 0 0 1 1 1 1 1 0 0 0 1 1 0 1 1 0 0 0 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 1 0 1 0 1 X2 X3 X4 X5 X6 ED50 0.33333 0.66667 0.56667 0.81333 0.74704 0.89766 0.92088 0.33333 0.66667 0.56667 0.81333 0.74704 0.89766 0.83865 0.33333 0.66667 0.56667 0.81333 0.74704 0.89766 0.89815 0.33333 0.66667 0.56667 0.81333 0.74704 0.89766 0.73875 0.33333 0.66667 0.56667 0.81333 0.63702 0.76797 0.78463 0.33333 0.66667 0.56667 0.81333 0.63702 0.76797 0.70641 0.33333 0.66667 0.56667 0.81333 0.63702 0.76797 0.76484 0.33333 0.66667 0.56667 0.81333 0.63702 0.76797 0.62898 0.33333 0.66667 0.56667 0.81333 0.49356 0.86510 0.87643 0.33333 0.66667 0.56667 0.81333 0.49356 0.86510 0.76993 0.33333 0.66667 0.56667 0.81333 0.49356 0.86510 0.77721 0.33333 0.66667 0.56667 0.81333 0.49356 0.86510 0.54524 0.33333 0.66667 0.56667 0.81333 0.41558 0.71583 0.72316 0.33333 0.66667 0.56667 0.81333 0.41558 0.71583 0.55282 0.33333 0.66667 0.56667 0.81333 0.41558 0.71583 0.54787 0.33333 0.66667 0.56667 0.81333 0.41558 0.71583 0.40480 0.33333 0.66667 0.38889 0.61111 0.54585 0.67564 0.70564 0.33333 0.66667 0.38889 0.61111 0.54585 0.67564 0.63324 0.33333 0.66667 0.38889 0.61111 0.54585 0.67564 0.63265 0.33333 0.66667 0.38889 0.61111 0.54585 0.67564 0.52829 0.33333 0.66667 0.38889 0.61111 0.42746 0.57254 0.58914 0.33333 0.66667 0.38889 0.61111 0.42746 0.57254 0.50000 0.33333 0.66667 0.38889 0.61111 0.42746 0.57254 0.50000 0.33333 0.66667 0.38889 0.61111 0.42746 0.57254 0.41086 0.33333 0.66667 0.38889 0.61111 0.34884 0.65116 0.65375 0.33333 0.66667 0.38889 0.61111 0.34884 0.65116 0.50000 0.33333 0.66667 0.38889 0.61111 0.34884 0.65116 0.50000 0.33333 0.66667 0.38889 0.61111 0.34884 0.65116 0.34625 0.33333 0.66667 0.38889 0.61111 0.32436 0.45415 0.47171 0.33333 0.66667 0.38889 0.61111 0.32436 0.45415 0.36676 0.33333 0.66667 0.38889 0.61111 0.32436 0.45415 0.36735 0.33333 0.66667 0.38889 0.61111 0.32436 0.45415 0.29436 0.33333 0.66667 0.26667 0.73333 0.41763 0.82800 0.84524 0.33333 0.66667 0.26667 0.73333 0.41763 0.82800 0.74260 0.33333 0.66667 0.26667 0.73333 0.41763 0.82800 0.76086 0.33333 0.66667 0.26667 0.73333 0.41763 0.82800 0.53023 0.33333 0.66667 0.26667 0.73333 0.30458 0.69542 0.69885 0.33333 0.66667 0.26667 0.73333 0.30458 0.69542 0.50000 0.33333 0.66667 0.26667 0.73333 0.30458 0.69542 0.50000 0.33333 0.66667 0.26667 0.73333 0.30458 0.69542 0.30115 0.33333 0.66667 0.26667 0.73333 0.21739 0.78261 0.75831 0.33333 0.66667 0.26667 0.73333 0.21739 0.78261 0.50000 0.33333 0.66667 0.26667 0.73333 0.21739 0.78261 0.50000 0.33333 0.66667 0.26667 0.73333 0.21739 0.78261 0.24169 0.33333 0.66667 0.26667 0.73333 0.17200 0.58237 0.46977 0.33333 0.66667 0.26667 0.73333 0.17200 0.58237 0.25740 0.33333 0.66667 0.26667 0.73333 0.17200 0.58237 0.23914 0.33333 0.66667 0.26667 0.73333 0.17200 0.58237 0.15476 0.33333 0.66667 0.18667 0.43333 0.28417 0.58442 0.59520 0.33333 0.66667 0.18667 0.43333 0.28417 0.58442 0.44718 0.33333 0.66667 0.18667 0.43333 0.28417 0.58442 0.45213 0.33333 0.66667 0.18667 0.43333 0.28417 0.58442 0.27684 0.33333 0.66667 0.18667 0.43333 0.23203 0.36298 0.37102 0.33333 0.66667 0.18667 0.43333 0.23203 0.36298 0.29359 0.33333 0.66667 0.18667 0.43333 0.23203 0.36298 0.23516 0.33333 0.66667 0.18667 0.43333 0.23203 0.36298 0.21537 0.33333 0.66667 0.18667 0.43333 0.13490 0.50644 0.45476 0.33333 0.66667 0.18667 0.43333 0.13490 0.50644 0.23007 0.33333 0.66667 0.18667 0.43333 0.13490 0.50644 0.22279 0.33333 0.66667 0.18667 0.43333 0.13490 0.50644 0.12357 0.33333 0.66667 0.18667 0.43333 0.10234 0.25296 0.26125 0.33333 0.66667 0.18667 0.43333 0.10234 0.25296 0.16135 0.33333 0.66667 0.18667 0.43333 0.10234 0.25296 0.10185 0.33333 0.66667 0.18667 0.43333 0.10234 0.25296 0.07912 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0.26000 0.58571 0.18667 0.43333 0.26000 0.58571 0.18667 0.43333 0.26000 0.58571 0.18667 0.43333 0.26000 0.58571 0.18667 0.43333 0.20577 0.38558 0.18667 0.43333 0.20577 0.38558 0.18667 0.43333 0.20577 0.38558 0.18667 0.43333 0.20577 0.38558 0.18667 0.43333 0.16000 0.50000 0.18667 0.43333 0.16000 0.50000 0.18667 0.43333 0.16000 0.50000 0.18667 0.43333 0.16000 0.50000 0.18667 0.43333 0.12571 0.30000 0.18667 0.43333 0.12571 0.30000 0.18667 0.43333 0.12571 0.30000 0.18667 0.43333 0.12571 0.30000 ED50 0.85333 0.81000 0.81000 0.73667 0.76949 0.72000 0.72000 0.67051 0.81333 0.72000 0.72000 0.56667 0.70333 0.57500 0.57500 0.46667 0.65873 0.60714 0.60714 0.51984 0.55891 0.50000 0.50000 0.44109 0.61111 0.50000 0.50000 0.38889 0.48016 0.39286 0.39286 0.34127 0.79048 0.72857 0.72857 0.55952 0.67070 0.50000 0.50000 0.32930 0.73333 0.50000 0.50000 0.26667 0.44048 0.27143 0.27143 0.20952 0.53333 0.42500 0.42500 0.29667 0.32949 0.28000 0.28000 0.23051 0.43333 0.28000 0.28000 0.18667 0.26333 0.19000 0.19000 0.14667 86 "I9E s 0 0 0 0 0 I 0 I 0 0 I I I 0 0 T 0 I I I 0 I T I 0 0 0 0 0 1 0 T 0 0 I I I 0 0 T 0 I I I 0 I I I 0 0 0 0 0 T 0 1 0 0 T T 0 0 0 I T I 0 I T I I I 0 0 0 0 0 1 0 T 0 0 T 1 i 0 0 I 0 I I T 0 T I I 0 0 0 0 0 T 0 I 0 0 I I I 0 0 I 0 I I I 0 I T I 0 0 0 0 0 T 0 T 0 0 T I 1 0 0 I 0 T I I 0 I I T 0 0 0 0 I 0 T 0 0 I 1 I 0 0 I 0 I 0 I I I 0 I I 0 0 0 0 0 T 0 I 0 0 T T I 1 0 0 0 I 1 0 I T T T Ix ZX Ex 4X 1x 9x OSCIE 00005'O 00SZ9'0 0000L'0 0005C0 ILS81:0 OSZI8'0 EEEE8'0 00005'0 00S19'0 0000L'0 000SC0 ILS8C0 OSZT8'0 L9T6L'0 00005'0 00SZ9'0 0000L'0 0005CO ILS8C0 E68SL'0 9L6LCO 00005'0 00SZ9'0 0000L'0 0005C0 IL58C0 E685C0 ETEEL*0 00005*0 00SZ9'0 0000L'0 00054:0 6ZPIL'0 LOTWO L999L'0 00005*0 00529'0 000000 0005C0 6Z4IC0 LOTWO PZOZCO 00005*0 00SZ9'0 0000L'0 0005CO 6Z4IL-0 SZT89'0 U80L:0 0000S-0 00529'0 000000 0005L'0 6n/1t:0 SZT89'0 000;9'0 00005*0 00529'0 0000L'0 00059'0 ILS89'0 SL81L*0 0005C0 0000S-0 00529'0 000000 00059'0 1L589'0 SL8TCO L9169'0 00005'0 00519'0 0000L'0 00059'0 ILS89-0 E68S9'0 9L6L9'0 00005'0 00519'0 0000L'0 00059'0 IL589'0 £6859'0 EEEE9'0 00005'0 00SZ9'0 0000L'0 00059'0 6IL09'0 L0T49'0 L9999'0 00005'0 00529-0 0000L'0 00059'0 4TL09'0 LOT69'0 90119'0 00005'0 00SZ9'0 0000L'0 00059'0 4IL09'0 05295'0 ZZL65'0 00005'0 00SZ9'0 0000L'0 00059'0 4TL09'0 05295'0 8LLZ5'0 00005-0 00SZ9'0 00055-0 00009'0 98249'0 OSL89-0 ZZZZL-0 0000S.0 00529'0 00055-0 00009'0 98Z49'0 OSL89'0 8L1S9'0 00005'0 00SZ9'0 00055-0 00009'0 98249'0 £6809'0 46Z£9-0 00005*0 00SZ9'0 00055-0 00009'0 98ZP9'0 £6809'0 EEE8S'0 00005-0 00SZ9'0 00055-0 00009'0 61495'0 L0165'0 L9919'0 0000S.0 00SZ9'0 00055'0 00009'0 6095'0 LOT6S'0 4ZOLS'0 00005'0 00529'0 00055'0 00009'0 61495'0 SZTES'0 E£855"0 0000S'0 00SZ9'0 00055-0 00009'0 61795'0 SZTES*0 00005'0 00005'0 00SZ9'0 00055*0 00005'0 ILSE5'0 SL895'0 00009'0 00005*0 00519'0 00055'0 00005-0 ILSES*0 1L89S*0 L9145'0 00005'0 00SZ9-0 00055'0 0000S-0 ILSES*0 £6805-0 9L6ZS-0 00005'0 00SZ9'0 00055-0 0000S-0 ILSE5'0 E6805'0 L990"0 00005*0 005Z9'0 00055'0 00005-0 LS8W0 41Z84'0 L99[5'0 00005'0 00SZ9'0 00055'0 00005'0 LS8W0 PIZWO 84044'0 00005*0 00SZ9'0 00055*0 00005'0 LS8Z4'0 005LE-0 L9916'0 00005*0 00529'0 00055*0 00005'0 LS8Z4'0 005LE'0 EEEEE'0 00005'0 00SLE'0 0000'0 00005*0 E41L5*0 00SZ9'0 L9999'0 00005*0 00SLE'0 0000'0 00005-0 E4TL5-0 00SZ9'0 EEE8S-0 0000S.0 4E-0 00 0000'0 00005*0 EPILS-0 98LIG*0 ZS6S5'0 00005-0 00SLU0 0000'0 0000S.0 £PIL5'0 98LIS*0 EEEWO 00005'0 00SLE'0 0000'0 00005'0 61494'0 LOI64'0 EEEES*0 00005*0 004E'0 0000'0 00005*0 614917'0 LOTWO 4ZOL6*0 0000S-0 00SLE'0 0000-0 00005'0 61494'0 SZTE4'0 EE8S6'0 00005*0 00SLUO 0000'0 00005*0 61494'0 SZIWO 0000'0 00005*0 00SLE'0 0000'0 000017-0 ILSWO SL894'0 00005'0 00005"0 005LE*0 0000'0 00001e0 IL50'0 SL80'0 L9I64'0 00005'0 004E*0 0000'0 000017'0 USW() E6804-0 9L6W0 00005*0 00SLE'0 0000'0 00004'0 USW() £6800-0 ££E8C0 00005'0 00SLE'0 0000'0 00004'0 4ILSE-0 LOIWO L99T4*0 0000S.0 005LCO 0000'0 00004'0 4ILSE-0 LOI6E-0 90L91"0 00005'0 00SLUO 0000'0 00004'0 4ILSE*0 OSZTUO ZZLVE*0 00005*0 00SLE'0 0000-0 000017'0 4ILSE-0 OSZIE'0 8LLI.r0 00005*0 00SLE'0 0000E"0 000SE-0 98Z6E*0 05LE4*0 ZZZL4*0 00005'0 00SLE'0 00001'0 0005E*0 9816£'0 OSLE4°0 8LZ06*0 0000S.0 00SLE'0 0000£'0 0005£'0 98Z6C0 £685C0 46Z8E'0 00005-0 00SLUO 0000£'0 000SE-0 9816E'0 £685E-0 EEEEE'0 00005*0 00SLE'0 00001'0 0005E-0 60TE-0 LOTPUO L9991'0 0000S.0 00SLE'0 0000£'0 000SE*0 6ZPIE*0 LOI4£'0 4ZOZE'0 0000S.0 00SLE'0 0000E-0 000SE'0 6Z4I£'0 SZT8Z-0 £E80£'0 00005-0 00SLE'0 0000E-0 0005E'0 6Z4TE'0 SZI8Z°0 00051-0 00005'0 00SLE'0 0000E'0 0005Z-0 ILS8Z'O SL8TE'0 0005E-0 00005*0 00SLE'0 0000E'0 00051'0 TLS8Z'0 5L8T1'0 L916Z'0 00005*0 00SLE'0 0000E-0 00051*0 ILS8Z*0 E68SZ*0 9L6LZ'0 00005'0 00SLE'0 0000E*0 000SZ-0 ILS8r0 £68SZ'0 EEEEZ'O 00005*0 00SLE'0 0000£'0 00051'0 6Z6IZ'0 LOIVZ'O L999r0 00005'0 00SLE'0 0000£'0 000S1*0 6ZPIZ*0 LOI4Z*0 PZOZZ'O 0000S.0 00SLE'0 0000£'0 00051'0 6Z4IZ*0 OSL8T*0 E£80Z'O 0000S.0 005LE-0 0000£'0 00051'0 60TZ'O OSL8I*0 L9991-0 99 The fixed doses (xj=3./(m+1), i=1,...,n) and the estimated ED50 for NOnm designs when L=6 (L=m*n). (Note : N016=A16=B16) NO23 S 0 0 0 0 2 1 0 1 1 1 2 2 2 2 0 0 0 0 1 1 2 0 1 2 1 0 1 1 1 2 2 0 2 1 2 2 0 0 0 1 0 2 1 0 1 1 1 2 2 0 2 1 2 2 X1 X2 X3 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 N032 s 0 0 0 0 0 1 1 2 3 0 1 1 1 2 1 3 2 0 2 1 2 2 3 3 3 3 2 3 0 1 2 3 xi. x2 ED50 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.78512 0.71275 0.57797 0.50000 0.75120 0.67356 0.50000 0.42203 0.70455 0.50000 0.32644 0.28725 0.50000 0.29545 0.24880 0.21488 NO61 s 0 1 2 3 4 5 6 xl ED50 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.71429 0.66667 0.60000 0.50000 0.40000 0.33333 0.28571 ED50 0.82400 0.71617 0.60902 0.78386 0.60000 0.50000 0.57638 0.43724 0.39098 0.79692 0.66013 0.56276 0.75165 0.50000 0.40000 0.45179 0.33987 0.28383 0.76000 0.54821 0.42362 0.50000 0.24835 0.21614 0.24000 0.20308 0.17600 100 The fixed doses (x1 =i/(m+1), i=1,...,n) and the estimated ED50 for SKNn (n=2,3,6) designs when L=6 (L=m*n) SKN2 S X1 x2 x3 0 0 0 1 0 1 2 0 1 1 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.25000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 0.75000 1 2 2 0 2 1 2 0 0 0 1 1 1 2 2 2 0 0 0 1 2 0 1 2 0 1 2 0 1 2 0 1 2 0 1 1 1 2 2 2 2 0 1 2 SKN3 s 0 0 0 0 1 1 0 1 2 3 0 1 1 2 1 3 2 0 2 1 2 2 3 3 3 3 2 3 0 1 2 3 xl x2 ED50 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.33333 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.66667 0.83333 0.72222 0.61111 0.50000 0.72222 0.61111 0.50000 0.38889 0.61111 0.50000 0.38889 0.27778 0.50000 0.38889 0.27778 0.16667 SKN6 s 0 1 2 3 4 5 6 xl ED50 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.75000 0.66667 0.58333 0.50000 0.41667 0.33333 0.25000 ED50 0.87500 0.75000 0.62500 0.75000 0.62500 0.50000 0.62500 0.50000 0.37500 0.75000 0.62500 0.50000 0.62500 0.50000 0.37500 0.50000 0.37500 0.25000 0.62500 0.50000 0.37500 0.50000 0.37500 0.25000 0.37500 0.25000 0.12500 . 101 The fixed doses and estimated ED50 for 64 possible outcomes when L=6 for UDq (q=001) design. UD001 S X1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 0 0 0 1 1 1 1 0 0 1 1 0 0 1 0 1 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 0 1 1 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 1 1 0 0 0 1 1 0 1 0 0 0 0 1 1 1 1 0 0 1 1 0 0 1 1 1 1 1 0 1 0 1 0 1 0 1 0 1 0 1 >C2 X3 >c4 X5 X6 EI) 5 0 0.50000 0.50100 0.50200 0.50300 0.50400 0.50500 0.50589 0.50000 0.50100 0.50200 0.50300 0.50400 0.50500 0.50462 0.50000 0.50100 0.50200 0.50300 0.50400 0.50300 0.50389 0.50000 0.50100 0.50200 0.50300 0.50400 0.50300 0.50303 0.50000 0.50100 0.50200 0.50300 0.50200 0.50300 0.50332 0.50000 0.50100 0.50200 0.50300 0.50200 0.50300 0.50257 0.50000 0.50100 0.50200 0.50300 0.50200 0.50100 0.50214 0.50000 0.50100 0.50200 0.50300 0.50200 0.50100 0.50150 0.50000 0.50100 0.50200 0.50100 0.50200 0.50300 0.50285 0.50000 0.50100 0.50200 0.50100 0.50200 0.50300 0.50214 0.50000 0.50100 0.50200 0.50100 0.50200 0.50100 0.50174 0.50000 0.50100 0.50200 0.50100 0.50200 0.50100 0.50117 0.50000 0.50100 0.50200 0.50100 0.50000 0.50100 0.50137 0.50000 0.50100 0.50200 0.50100 0.50000 0.50100 0.50083 0.50000 0.50100 0.50200 0.50100 0.50000 0.49900 0.50050 0.50000 0.50100 0.50200 0.50100 0.50000 0.49900 0.49990 0.50000 0.50100 0.50000 0.50100 0.50200 0.50300 0.50245 0.50000 0.50100 0.50000 0.50100 0.50200 0.50300 0.50175 0.50000 0.50100 0.50000 0.50100 0.50200 0.50100 0.50137 0.50000 0.50100 0.50000 0.50100 0.50200 0.50100 0.50083 0.50000 0.50100 0.50000 0.50100 0.50000 0.50100 0.50102 0.50000 0.50100 0.50000 0.50100 0.50000 0.50100 0.50050 0.50000 0.50100 0.50000 0.50100 0.50000 0.49900 0.50017 0.50000 0.50100 0.50000 0.50100 0.50000 0.49900 0.49961 0.50000 0.50100 0.50000 0.49900 0.50000 0.50100 0.50070 0.50000 0.50100 0.50000 0.49900 0.50000 0.50100 0.50017 0.50000 0.50100 0.50000 0.49900 0.50000 0.49900 0.49983 0.50000 0.50100 0.50000 0.49900 0.50000 0.49900 0.49930 0.50000 0.50100 0.50000 0.49900 0.49800 0.49900 0.49950 0.50000 0.50100 0.50000 0.49900 0.49800 0.49900 0.49896 0.50000 0.50100 0.50000 0.49900 0.49800 0.49700 0.49860 0.50000 0.50100 0.50000 0.49900 0.49800 0.49700 0.49789 0.50000 0.49900 0.50000 0.50100 0.50200 0.50300 0.50211 0.50000 0.49900 0.50000 0.50100 0.50200 0.50300 0.50140 0.50000 0.49900 0.50000 0.50100 0.50200 0.50100 0.50104 0.50000 0.49900 0.50000 0.50100 0.50200 0.50100 0.50050 0.50000 0.49900 0.50000 0.50100 0.50000 0.50100 0.50070 0.50000 0.49900 0.50000 0.50100 0.50000 0.50100 0.50017 0.50000 0.49900 0.50000 0.50100 0.50000 0.49900 0.49983 0.50000 0.49900 0.50000 0.50100 0.50000 0.49900 0.49930 0.50000 0.49900 0.50000 0.49900 0.50000 0.50100 0.50039 0.50000 0.49900 0.50000 0.49900 0.50000 0.50100 0.49983 0.50000 0.49900 0.50000 0.49900 0.50000 0.49900 0.49950 0.50000 0.49900 0.50000 0.49900 0.50000 0.49900 0.49898 0.50000 0.49900 0.50000 0.49900 0.49800 0.49900 0.49917 0.50000 0.49900 0.50000 0.49900 0.49800 0.49900 0.49863 0.50000 0.49900 0.50000 0.49900 0.49800 0.49700 0.49825 0.50000 0.49900 0.50000 0.49900 0.49800 0.49700 0.49755 0.50000 0.49900 0.49800 0.49900 0.50000 0.50100 0.50155 0.50000 0.49900 0.49800 0.49900 0.50000 0.50100 0.50225 0.50000 0.49900 0.49800 0.49900 0.50000 0.49900 0.49863 0.50000 0.49900 0.49800 0.49900 0.50000 0.49900 0.49917 0.50000 0.49900 0.49800 0.49900 0.49800 0.49900 0.49898 0.50000 0.49900 0.49800 0.49900 0.49800 0.49900 0.49950 0.50000 0.49900 0.49800 0.49900 0.49800 0.49700 0.49583 0.50000 0.49900 0.49800 0.49900 0.49800 0.49700 0.49639 0.50000 0.49900 0.49800 0.49700 0.49800 0.49900 0.49930 0.50000 0.49900 0.49800 0.49700 0.49800 0.49900 0.49983 0.50000 0.49900 0.49800 0.49700 0.49800 0.49700 0.49783 0.50000 0.49900 0.49800 0.49700 0.49800 0.49700 0.49670 0.50000 0.49900 0.49800 0.49700 0.49600 0.49700 0.49650 0.50000 0.49900 0.49800 0.49700 0.49600 0.49700 0.49704 0.50000 0.49900 0.49800 0.49700 0.49600 0.49500 0.49340 0.50000 0.49900 0.49800 0.49700 0.49600 0.49500 0.49411 102 The fixed doses and estimated ED50 for 64 possible outcomes when L=6 for UDq (q=035) design. UD035 S X1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 0 0 1 1 1 0 1 0 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 0 0 0 1 1 1 0 1 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 X2 X3 x4 x5 x6 ED50 0.50000 0.53500 0.57000 0.60500 0.64000 0.67500 0.70626 0.50000 0.53500 0.57000 0.60500 0.64000 0.67500 0.66184 0.50000 0.53500 0.57000 0.60500 0.64000 0.60500 0.63629 0.50000 0.53500 0.57000 0.60500 0.64000 0.60500 0.60598 0.50000 0.53500 0.57000 0.60500 0.57000 0.60500 0.61603 0.50000 0.53500 0.57000 0.60500 0.57000 0.60500 0.58988 0.50000 0.53500 0.57000 0.60500 0.57000 0.53500 0.57487 0.50000 0.53500 0.57000 0.60500 0.57000 0.53500 0.55250 0.50000 0.53500 0.57000 0.53500 0.57000 0.60500 0.59961 0.50000 0.53500 0.57000 0.53500 0.57000 0.60500 0.57487 0.50000 0.53500 0.57000 0.53500 0.57000 0.53500 0.56080 0.50000 0.53500 0.57000 0.53500 0.57000 0.53500 0.54092 0.50000 0.53500 0.57000 0.53500 0.50000 0.53500 0.54802 0.50000 0.53500 0.57000 0.53500 0.50000 0.53500 0.52909 0.50000 0.53500 0.57000 0.53500 0.50000 0.46500 0.51750 0.50000 0.53500 0.57000 0.53500 0.50000 0.46500 0.49640 0.50000 0.53500 0.50000 0.53500 0.57000 0.60500 0.58586 0.50000 0.53500 0.50000 0.53500 0.57000 0.60500 0.56125 0.50000 0.53500 0.50000 0.53500 0.57000 0.53500 0.54802 0.50000 0.53500 0.50000 0.53500 0.57000 0.53500 0.52909 0.50000 0.53500 0.50000 0.53500 0.50000 0.53500 0.53577 0.50000 0.53500 0.50000 0.53500 0.50000 0.53500 0.51750 0.50000 0.53500 0.50000 0.53500 0.50000 0.46500 0.50592 0.50000 0.53500 0.50000 0.53500 0.50000 0.46500 0.48639 0.50000 0.53500 0.50000 0.46500 0.50000 0.53500 0.52464 0.50000 0.53500 0.50000 0.46500 0.50000 0.53500 0.50592 0.50000 0.53500 0.50000 0.46500 0.50000 0.46500 0.49409 0.50000 0.53500 0.50000 0.46500 0.50000 0.46500 0.47536 0.50000 0.53500 0.50000 0.46500 0.43000 0.46500 0.48250 0.50000 0.53500 0.50000 0.46500 0.43000 0.46500 0.46350 0.50000 0.53500 0.50000 0.46500 0.43000 0.39500 0.45110 0.50000 0.53500 0.50000 0.46500 0.43000 0.39500 0.42625 0.50000 0.46500 0.50000 0.53500 0.57000 0.60500 0.57375 0.50000 0.46500 0.50000 0.53500 0.57000 0.60500 0.54890 0.50000 0.46500 0.50000 0.53500 0.57000 0.53500 0.53651 0.50000 0.46500 0.50000 0.53500 0.57000 0.53500 0.51750 0.50000 0.46500 0.50000 0.53500 0.50000 0.53500 0.52464 0.50000 0.46500 0.50000 0.53500 0.50000 0.53500 0.50592 0.50000 0.46500 0.50000 0.53500 0.50000 0.46500 0.49409 0.50000 0.46500 0.50000 0.53500 0.50000 0.46500 0.47536 0.50000 0.46500 0.50000 0.46500 0.50000 0.53500 0.51362 0.50000 0.46500 0.50000 0.46500 0.50000 0.53500 0.49409 0.50000 0.46500 0.50000 0.46500 0.50000 0.46500 0.48250 0.50000 0.46500 0.50000 0.46500 0.50000 0.46500 0.46423 0.50000 0.46500 0.50000 0.46500 0.43000 0.46500 0.47092 0.50000 0.46500 0.50000 0.46500 0.43000 0.46500 0.45198 0.50000 0.46500 0.50000 0.46500 0.43000 0.39500 0.43875 0.50000 0.46500 0.50000 0.46500 0.43000 0.39500 0.41414 0.50000 0.46500 0.43000 0.46500 0.50000 0.53500 0.55415 0.50000 0.46500 0.43000 0.46500 0.50000 0.53500 0.57875 0.50000 0.46500 0.43000 0.46500 0.50000 0.46500 0.45198 0.50000 0.46500 0.43000 0.46500 0.50000 0.46500 0.47092 0.50000 0.46500 0.43000 0.46500 0.43000 0.46500 0.46423 0.50000 0.46500 0.43000 0.46500 0.43000 0.46500 0.48250 0.50000 0.46500 0.43000 0.46500 0.43000 0.39500 0.35408 0.50000 0.46500 0.43000 0.46500 0.43000 0.39500 0.37361 0.50000 0.46500 0.43000 0.39500 0.43000 0.46500 0.47536 0.50000 0.46500 0.43000 0.39500 0.43000 0.46500 0.49409 0.50000 0.46500 0.43000 0.39500 0.43000 0.39500 0.42408 0.50000 0.46500 0.43000 0.39500 0.43000 0.39500 0.38464 0.50000 0.46500 0.43000 0.39500 0.36000 0.39500 0.37750 0.50000 0.46500 0.43000 0.39500 0.36000 0.39500 0.39650 0.50000 0.46500 0.43000 0.39500 0.36000 0.32500 0.26889 0.50000 0.46500 0.43000 0.39500 0.36000 0.32500 0.29374 103 The fixed doses and estimated ED50 for 64 possible outcomes when L=6 for UDq (q=075) design. UD075 X1 S 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 0 1 1 0 1 0 1 0 1 1 1 0 0 0 0 1 1 1 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 1 0 0 1 1 0 0 1 0 1 0 1 0 1 0 1 0 1 0 1 0 1 0 1 1 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 0 1 1 1 1 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 1 1 1 0 0 0 0 1 1 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 X2 X3 X4 X5 X6 0.50000 0.57500 0.65000 0.72500 0.80000 0.87500 0.50000 0.57500 0.65000 0.72500 0.80000 0.87500 0.50000 0.57500 0.65000 0.72500 0.80000 0.72500 0.50000 0.57500 0.65000 0.72500 0.80000 0.72500 0.50000 0.57500 0.65000 0.72500 0.65000 0.72500 0.50000 0.57500 0.65000 0.72500 0.65000 0.72500 0.50000 0.57500 0.65000 0.72500 0.65000 0.57500 0.50000 0.57500 0.65000 0.72500 0.65000 0.57500 0.50000 0.57500 0.65000 0.57500 0.65000 0.72500 0.50000 0.57500 0.65000 0.57500 0.65000 0.72500 0.50000 0.57500 0.65000 0.57500 0.65000 0.57500 0.50000 0.57500 0.65000 0.57500 0.65000 0.57500 0.50000 0.57500 0.65000 0.57500 0.50000 0.57500 0.50000 0.57500 0.65000 0.57500 0.50000 0.57500 0.50000 0.57500 0.65000 0.57500 0.50000 0.42500 0.50000 0.57500 0.65000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.57500 0.65000 0.72500 0.50000 0.57500 0.50000 0.57500 0.65000 0.72500 0.50000 0.57500 0.50000 0.57500 0.65000 0.57500 0.50000 0.57500 0.50000 0.57500 0.65000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.57500 0.50000 0.42500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.35000 0.42500 0.50000 0.57500 0.50000 0.42500 0.35000 0.42500 0.50000 0.57500 0.50000 0.42500 0.35000 0.27500 0.50000 0.57500 0.50000 0.42500 0.35000 0.27500 0.50000 0.42500 0.50000 0.57500 0.65000 0.72500 0.50000 0.42500 0.50000 0.57500 0.65000 0.72500 0.50000 0.42500 0.50000 0.57500 0.65000 0.57500 0.50000 0.42500 0.50000 0.57500 0.65000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.57500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.50000 0.42500 0.50000 0.57500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.50000 0.42500 0.35000 0.42500 0.50000 0.42500 0.50000 0.42500 0.35000 0.42500 0.50000 0.42500 0.50000 0.42500 0.35000 0.27500 0.50000 0.42500 0.50000 0.42500 0.35000 0.27500 0.50000 0.42500 0.35000 0.42500 0.50000 0.57500 0.50000 0.42500 0.35000 0.42500 0.50000 0.57500 0.50000 0.42500 0.35000 0.42500 0.50000 0.42500 0.50000 0.42500 0.35000 0.42500 0.50000 0.42500 0.50000 0.42500 0.35000 0.42500 0.35000 0.42500 0.50000 0.42500 0.35000 0.42500 0.35000 0.42500 0.50000 0.42500 0.35000 0.42500 0.35000 0.27500 0.50000 0.42500 0.35000 0.42500 0.35000 0.27500 0.50000 0.42500 0.35000 0.27500 0.35000 0.42500 0.50000 0.42500 0.35000 0.27500 0.35000 0.42500 0.50000 0.42500 0.35000 0.27500 0.35000 0.27500 0.50000 0.42500 0.35000 0.27500 0.35000 0.27500 0.50000 0.42500 0.35000 0.27500 0.20000 0.27500 0.50000 0.42500 0.35000 0.27500 0.20000 0.27500 0.50000 0.42500 0.35000 0.27500 0.20000 0.12500 0.50000 0.42500 0.35000 0.27500 0.20000 0.12500 ED50 .94197 .84680 .79205 .72710 .74862 .69260 .66042 .61250 .71345 .66042 .63027 .58767 .60290 .56233 .53750 .49227 .68397 .63125 .60290 .56233 .57665 .53750 .51268 .47082 .55280 .51268 .48732 .44720 .46250 .42178 .39522 .34197 .65802 .60477 .57823 .53750 .55280 .51268 .48732 .44720 .52918 .48733 .46250 .42335 .43768 .39710 .36875 .31602 .61602 .66875 .39710 .43768 .42335 .46250 .18733 .22918 .44120 .48733 .33733 .25280 .23750 .27822 .00477 .05802 104 The fixed doses and estimated ED50 for 64 possible outcomes when L=6 for RM1Cc (n=1, c=.001) design. RM1C0 S X1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 X2 X3 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50075 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.50050 0.50025 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49975 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 0.50000 0.49950 0.49925 X4 0.50092 0.50092 0.50092 0.50092 0.50092 0.50092 0.50092 0.50092 0.50058 0.50058 0.50058 0.50058 0.50058 0.50058 0.50058 0.50058 0.50042 0.50042 0.50042 0.50042 0.50042 0.50042 0.50042 0.50042 0.50008 0.50008 0.50008 0.50008 0.50008 0.50008 0.50008 0.50008 0.49992 0.49992 0.49992 0.49992 0.49992 0.49992 0.49992 0.49992 0.49958 0.49958 0.49958 0.49958 0.49958 0.49958 0.49958 0.49958 0.49942 0.49942 0.49942 0.49942 0.49942 0.49942 0.49942 0.49942 0.49908 0.49908 0.49908 0.49908 0.49908 0.49908 0.49908 0.49908 X5 X6 0.50104 0.50114 0.50104 0.50114 0.50104 0.50094 0.50104 0.50094 0.50079 0.50089 0.50079 0.50089 0.50079 0.50069 0.50079 0.50069 0.50071 0.50081 0.50071 0.50081 0.50071 0.50061 0.50071 0.50061 0.50046 0.50056 0.50046 0.50056 0.50046 0.50036 0.50046 0.50036 0.50054 0.50064 0.50054 0.50064 0.50054 0.50044 0.50054 0.50044 0.50029 0.50039 0.50029 0.50039 0.50029 0.50019 0.50029 0.50019 0.50021 0.50031 0.50021 0.50031 0.50021 0.50011 0.50021 0.50011 0.49996 0.50006 0.49996 0.50006 0.49996 0.49986 0.49996 0.49986 0.50004 0.50014 0.50004 0.50014 0.50004 0.49994 0.50004 0.49994 0.49979 0.49989 0.49979 0.49989 0.49979 0.49969 0.49979 0.49969 0.49971 0.49981 0.49971 0.49981 0.49971 0.49961 0.49971 0.49961 0.49946 0.49956 0.49946 0.49956 0.49946 0.49936 0.49946 0.49936 0.49954 0.49964 0.49954 0.49964 0.49954 0.49944 0.49954 0.49944 0.49929 0.49939 0.49929 0.49939 0.49929 0.49919 0.49929 0.49919 0.49921 0.49931 0.49921 0.49931 0.49921 0.49911 0.49921 0.49911 0.49896 0.49906 0.49896 0.49906 0.49896 0.49886 0.49896 0.49886 ED50 0.50122 0.50106 0.50102 0.50086 0.50097 0.50081 0.50077 0.50061 0.50089 0.50073 0.50069 0.50053 0.50064 0.50047 0.50044 0.50027 0.50073 0.50056 0.50053 0.50036 0.50047 0.50031 0.50027 0.50011 0.50039 0.50023 0.50019 0.50003 0.50014 0.49998 0.49994 0.49978 0.50022 0.50006 0.50002 0.49986 0.49997 0.49981 0.49978 0.49961 0.49989 0.49973 0.49969 0.49953 0.49964 0.49948 0.49944 0.49928 0.49973 0.49956 0.49953 0.49936 0.49948 0.49931 0.49928 0.49911 0.49939 0.49923 0.49919 0.49903 0.49914 0.49898 0.49894 0.49878 105 The fixed doses and estimated ED50 for 64 possible outcomes when L=6 for RM1Cc (n=1, c=.2) design. RM1C2 S X1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 0 1 1 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 1 0 1 0 0 1 1 1 0 0 1 0 1 1 0 1 1 1 1 X2 X3 x4 X5 X6 ED50 0.50000 0.60000 0.65000 0.68333 0.70833 0.72833 0.74500 0.50000 0.60000 0.65000 0.68333 0.70833 0.72833 0.71167 0.50000 0.60000 0.65000 0.68333 0.70833 0.68833 0.70500 0.50000 0.60000 0.65000 0.68333 0.70833 0.68833 0.67167 0.50000 0.60000 0.65000 0.68333 0.65833 0.67833 0.69500 0.50000 0.60000 0.65000 0.68333 0.65833 0.67833 0.66167 0.50000 0.60000 0.65000 0.68333 0.65833 0.63833 0.65500 0.50000 0.60000 0.65000 0.68333 0.65833 0.63833 0.62167 0.50000 0.60000 0.65000 0.61667 0.64167 0.66167 0.67833 0.50000 0.60000 0.65000 0.61667 0.64167 0.66167 0.64500 0.50000 0.60000 0.65000 0.61667 0.64167 0.62167 0.63833 0.50000 0.60000 0.65000 0.61667 0.64167 0.62167 0.60500 0.50000 0.60000 0.65000 0.61667 0.59167 0.61167 0.62833 0.50000 0.60000 0.65000 0.61667 0.59167 0.61167 0.59500 0.50000 0.60000 0.65000 0.61667 0.59167 0.57167 0.58833 0.50000 0.60000 0.65000 0.61667 0.59167 0.57167 0.55500 0.50000 0.60000 0.55000 0.58333 0.60833 0.62833 0.64500 0.50000 0.60000 0.55000 0.58333 0.60833 0.62833 0.61167 0.50000 0.60000 0.55000 0.58333 0.60833 0.58833 0.60500 0.50000 0.60000 0.55000 0.58333 0.60833 0.58833 0.57167 0.50000 0.60000 0.55000 0.58333 0.55833 0.57833 0.59500 0.50000 0.60000 0.55000 0.58333 0.55833 0.57833 0.56167 0.50000 0.60000 0.55000 0.58333 0.55833 0.53833 0.55500 0.50000 0.60000 0.55000 0.58333 0.55833 0.53833 0.52167 0.50000 0.60000 0.55000 0.51667 0.54167 0.56167 0.57833 0.50000 0.60000 0.55000 0.51667 0.54167 0.56167 0.54500 0.50000 0.60000 0.55000 0.51667 0.54167 0.52167 0.53833 0.50000 0.60000 0.55000 0.51667 0.54167 0.52167 0.50500 0.50000 0.60000 0.55000 0.51667 0.49167 0.51167 0.52833 0.50000 0.60000 0.55000 0.51667 0.49167 0.51167 0.49500 0.50000 0.60000 0.55000 0.51667 0.49167 0.47167 0.48833 0.50000 0.60000 0.55000 0.51667 0.49167 0.47167 0.45500 0.50000 0.40000 0.45000 0.48333 0.50833 0.52833 0.54500 0.50000 0.40000 0.45000 0.48333 0.50833 0.52833 0.51167 0.50000 0.40000 0.45000 0.48333 0.50833 0.48833 0.50500 0.50000 0.40000 0.45000 0.48333 0.50833 0.48833 0.47167 0.50000 0.40000 0.45000 0.48333 0.45833 0.47833 0.49500 0.50000 0.40000 0.45000 0.48333 0.45833 0.47833 0.46167 0.50000 0.40000 0.45000 0.48333 0.45833 0.43833 0.45500 0.50000 0.40000 0.45000 0.48333 0.45833 0.43833 0.42167 0.50000 0.40000 0.45000 0.41667 0.44167 0.46167 0.47833 0.50000 0.40000 0.45000 0.41667 0.44167 0.46167 0.44500 0.50000 0.40000 0.45000 0.41667 0.44167 0.42167 0.43833 0.50000 0.40000 0.45000 0.41667 0.44167 0.42167 0.40500 0.50000 0.40000 0.45000 0.41667 0.39167 0.41167 0.42833 0.50000 0.40000 0.45000 0.41667 0.39167 0.41167 0.39500 0.50000 0.40000 0.45000 0.41667 0.39167 0.37167 0.38833 0.50000 0.40000 0.45000 0.41667 0.39167 0.37167 0.35500 0.50000 0.40000 0.35000 0.38333 0.40833 0.42833 0.44500 0.50000 0.40000 0.35000 0.38333 0.40833 0.42833 0.41167 0.50000 0.40000 0.35000 0.38333 0.40833 0.38833 0.40500 0.50000 0.40000 0.35000 0.38333 0.40833 0.38833 0.37167 0.50000 0.40000 0.35000 0.38333 0.35833 0.37833 0.39500 0.50000 0.40000 0.35000 0.38333 0.35833 0.37833 0.36167 0.50000 0.40000 0.35000 0.38333 0.35833 0.33833 0.35500 0.50000 0.40000 0.35000 0.38333 0.35833 0.33833 0.32167 0.50000 0.40000 0.35000 0.31667 0.34167 0.36167 0.37833 0.50000 0.40000 0.35000 0.31667 0.34167 0.36167 0.34500 0.50000 0.40000 0.35000 0.31667 0.34167 0.32167 0.33833 0.50000 0.40000 0.35000 0.31667 0.34167 0.32167 0.30500 0.50000 0.40000 0.35000 0.31667 0.29167 0.31167 0.32833 0.50000 0.40000 0.35000 0.31667 0.29167 0.31167 0.29500 0.50000 0.40000 0.35000 0.31667 0.29167 0.27167 0.28833 0.50000 0.40000 0.35000 0.31667 0.29167 0.27167 0.25500 106 The fixed doses and estimated ED50 for 64 possible outcomes when L=6 for RM1Cc (n=1, c=.408) design. RM1C4 S X1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 0 1 1 0 1 0 1 0 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 0 1 1 1 1 0 0 0 0 0 0 1 0 1 1 0 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 0 0 0 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 1 1 1 0 0 0 0 1 1 1 0 0 1 1 0 0 1 0 0 1 1 1 0 0 0 0 1 1 0 0 0 1 1 0 1 1 0 0 0 1 1 1 0 1 1 1 0 1 0 1 0 1 x2 x3 X4 x5 x6 ED50 0.50000 0.70408 0.80612 0.87415 0.92517 0.96599 1.00000 0.50000 0.70408 0.80612 0.87415 0.92517 0.96599 0.93197 0.50000 0.70408 0.80612 0.87415 0.92517 0.88435 0.91837 0.50000 0.70408 0.80612 0.87415 0.92517 0.88435 0.85034 0.50000 0.70408 0.80612 0.87415 0.82313 0.86395 0.89796 0.50000 0.70408 0.80612 0.87415 0.82313 0.86395 0.82993 0.50000 0.70408 0.80612 0.87415 0.82313 0.78231 0.81633 0.50000 0.70408 0.80612 0.87415 0.82313 0.78231 0.74830 0.50000 0.70408 0.80612 0.73810 0.78912 0.82993 0.86395 0.50000 0.70408 0.80612 0.73810 0.78912 0.82993 0.79592 0.50000 0.70408 0.80612 0.73810 0.78912 0.74830 0.78231 0.50000 0.70408 0.80612 0.73810 0.78912 0.74830 0.71429 0.50000 0.70408 0.80612 0.73810 0.68707 0.72789 0.76190 0.50000 0.70408 0.80612 0.73810 0.68707 0.72789 0.69388 0.50000 0.70408 0.80612 0.73810 0.68707 0.64626 0.68027 0.50000 0.70408 0.80612 0.73810 0.68707 0.64626 0.61224 0.50000 0.70408 0.60204 0.67007 0.72109 0.76190 0.79592 0.50000 0.70408 0.60204 0.67007 0.72109 0.76190 0.72789 0.50000 0.70408 0.60204 0.67007 0.72109 0.68027 0.71429 0.50000 0.70408 0.60204 0.67007 0.72109 0.68027 0.64626 0.50000 0.70408 0.60204 0.67007 0.61905 0.65986 0.69388 0.50000 0.70408 0.60204 0.67007 0.61905 0.65986 0.62585 0.50000 0.70408 0.60204 0.67007 0.61905 0.57823 0.61224 0.50000 0.70408 0.60204 0.67007 0.61905 0.57823 0.54422 0.50000 0.70408 0.60204 0.53401 0.58503 0.62585 0.65986 0.50000 0.70408 0.60204 0.53401 0.58503 0.62585 0.59184 0.50000 0.70408 0.60204 0.53401 0.58503 0.54422 0.57823 0.50000 0.70408 0.60204 0.53401 0.58503 0.54422 0.51020 0.50000 0.70408 0.60204 0.53401 0.48299 0.52381 0.55782 0.50000 0.70408 0.60204 0.53401 0.48299 0.52381 0.48980 0.50000 0.70408 0.60204 0.53401 0.48299 0.44218 0.47619 0.50000 0.70408 0.60204 0.53401 0.48299 0.44218 0.40816 0.50000 0.29592 0.39796 0.46599 0.51701 0.55782 0.59184 0.50000 0.29592 0.39796 0.46599 0.51701 0.55782 0.52381 0.50000 0.29592 0.39796 0.46599 0.51701 0.47619 0.51020 0.50000 0.29592 0.39796 0.46599 0.51701 0.47619 0.44218 0.50000 0.29592 0.39796 0.46599 0.41497 0.45578 0.48980 0.50000 0.29592 0.39796 0.46599 0.41497 0.45578 0.42177 0.50000 0.29592 0.39796 0.46599 0.41497 0.37415 0.40816 0.50000 0.29592 0.39796 0.46599 0.41497 0.37415 0.34014 0.50000 0.29592 0.39796 0.32993 0.38095 0.42177 0.45578 0.50000 0.29592 0.39796 0.32993 0.38095 0.42177 0.38776 0.50000 0.29592 0.39796 0.32993 0.38095 0.34014 0.37415 0.50000 0.29592 0.39796 0.32993 0.38095 0.34014 0.30612 0.50000 0.29592 0.39796 0.32993 0.27891 0.31973 0.35374 0.50000 0.29592 0.39796 0.32993 0.27891 0.31973 0.28571 0.50000 0.29592 0.39796 0.32993 0.27891 0.23810 0.27211 0.50000 0.29592 0.39796 0.32993 0.27891 0.23810 0.20408 0.50000 0.29592 0.19388 0.26190 0.31293 0.35374 0.38776 0.50000 0.29592 0.19388 0.26190 0.31293 0.35374 0.31973 0.50000 0.29592 0.19388 0.26190 0.31293 0.27211 0.30612 0.50000 0.29592 0.19388 0.26190 0.31293 0.27211 0.23810 0.50000 0.29592 0.19388 0.26190 0.21088 0.25170 0.28571 0.50000 0.29592 0.19388 0.26190 0.21088 0.25170 0.21769 0.50000 0.29592 0.19388 0.26190 0.21088 0.17007 0.20408 0.50000 0.29592 0.19388 0.26190 0.21088 0.17007 0.13605 0.50000 0.29592 0.19388 0.12585 0.17687 0.21769 0.25170 0.50000 0.29592 0.19388 0.12585 0.17687 0.21769 0.18367 0.50000 0.29592 0.19388 0.12585 0.17687 0.13605 0.17007 0.50000 0.29592 0.19388 0.12585 0.17687 0.13605 0.10204 0.50000 0.29592 0.19388 0.12585 0.07483 0.11565 0.14966 0.50000 0.29592 0.19388 0.12585 0.07483 0.11565 0.08163 0.50000 0.29592 0.19388 0.12585 0.07483 0.03401 0.06803 0.50000 0.29592 0.19388 0.12585 0.07483 0.03401 0.00000 107 The fixed doses and estimated ED50 when L=6 for RM2Cc (n=2, c=.001, .25) designs. RM2C0 s x1 X2 x3 0 0 0 1 0 1 2 0 1 1 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50050 0.50050 0.50050 0.50050 0.50050 0.50050 0.50050 0.50050 0.50050 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.49950 0.49950 0.49950 0.49950 0.49950 0.49950 0.49950 0.49950 0.49950 0.50075 0.50075 0.50075 0.50050 0.50050 0.50050 0.50025 0.50025 0.50025 0.50025 0.50025 0.50025 0.50000 0.50000 0.50000 0.49975 0.49975 0.49975 0.49975 0.49975 0.49975 0.49950 0.49950 0.49950 0.49925 0.49925 0.49925 1 2 2 0 2 1 2 2 0 0 0 1 0 2 1 0 1 1 1 2 2 0 2 2 0 0 0 1 1 2 1 1 0 1 2 0 1 2 2 0 2 1 2 2 ED50 0.50092 0.50075 0.50058 0.50067 0.50050 0.50033 0.50042 0.50025 0.50008 0.50042 0.50025 0.50008 0.50017 0.50000 0.49983 0.49992 0.49975 0.49958 0.49992 0.49975 0.49958 0.49967 0.49950 0.49933 0.49942 0.49925 0.49908 RM2C2 0 0 s X1 x2 0 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.62500 0.62500 0.62500 0.62500 0.62500 0.62500 0.62500 0.62500 0.62500 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.37500 0.37500 0.37500 0.37500 0.37500 0.37500 0.37500 0.37500 0.37500 1 0 2 1 0 1 1 1 2 2 0 2 1 2 2 0 0 0 0 1 1 1 1 0 2 1 2 2 0 2 1 2 2 0 0 0 1 0 2 1 0 1 1 2 2 2 2 1 0 1 2 x3 0.68750 0.68750 0.68750 0.62500 0.62500 0.62500 0.56250 0.56250 0.56250 0.56250 0.56250 0.56250 0.50000 0.50000 0.50000 0.43750 0.43750 0.43750 0.43750 0.43750 0.43750 0.37500 0.37500 0.37500 0.31250 0.31250 0.31250 ED50 0.72917 0.68750 0.64583 0.66667 0.62500 0.58333 0.60417 0.56250 0.52083 0.60417 0.56250 0.52083 0.54167 0.50000 0.45833 0.47917 0.43750 0.39583 0.47917 0.43750 0.39583 0.41667 0.37500 0.33333 0.35417 0.31250 0.27083 108 The fixed doses and estimated ED50 when L=6 for RM2Cc (n=2, c=.5454) design. RM2C5 X1 00 00 00 01 01 0 0 2 1 02 02 02 10 10 10 1 1 1 2 0 1 0 1 2 0 1 2 0 11 11 12 12 12 20 20 20 1 2 2 0 1 21 21 1 2 0 0 1 2 1 2 2 2 0 22 22 1 2 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 x2 x3 0.77273 0.90909 0.77273 0.90909 0.77273 0.90909 0.77273 0.77273 0.77273 0.77273 0.77273 0.77273 0.77273 0.63636 0.77273 0.63636 0.77273 0.63636 0.50000 0.63636 0.50000 0.63636 0.50000 0.63636 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.36364 0.50000 0.36364 0.50000 0.36364 0.22727 0.36364 0.22727 0.36364 0.22727 0.36364 0.22727 0.22727 0.22727 0.22727 0.22727 0.22727 0.22727 0.09091 0.22727 0.09091 0.22727 0.09091 ED50 1.00000 0.90909 0.81818 0.86364 0.77273 0.68182 0.72727 0.63636 0.54545 0.72727 0.63636 0.54545 0.59091 0.50000 0.40909 0.45455 0.36364 0.27273 0.45455 0.36364 0.27273 0.31818 0.22727 0.13636 0.18182 0.09091 0.00000 109 The fixed doses and estimated ED50 when L=6 for RM3Cc (n=3, c=.001, .333, .667) designs. RM3C0 0 0 0 0 1 0 1 2 3 0 1 1 1 1 2 2 2 2 3 3 3 3 2 3 0 1 2 3 0 1 2 3 xl x2 ED50 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50050 0.50050 0.50050 0.50050 0.50017 0.50017 0.50017 0.50017 0.49983 0.49983 0.49983 0.49983 0.49950 0.49950 0.49950 0.49950 0.50075 0.50058 0.50042 0.50025 0.50042 0.50025 0.50008 0.49992 0.50008 0.49992 0.49975 0.49958 0.49975 0.49958 0.49942 0.49925 RM3C3 0 0 0 0 1 1 0 1 2 3 0 1 1 2 1 3 2 0 2 1 2 2 3 3 3 3 2 3 0 1 2 3 x1 x2 ED50 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.66667 0.66667 0.66667 0.66667 0.55556 0.55556 0.55556 0.55556 0.44444 0.44444 0.44444 0.44444 0.33333 0.33333 0.33333 0.33333 0.75000 0.69444 0.63889 0.58333 0.63889 0.58333 0.52778 0.47222 0.52778 0.47222 0.41667 0.36111 0.41667 0.36111 0.30556 0.25000 RM3C6 0 0 0 0 1 0 1 2 3 0 1 1 1 2 1 3 2 0 2 1 2 2 2 3 3 0 3 1 3 2 3 3 x1 x2 ED50 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.83333 0.83333 0.83333 0.83333 0.61111 0.61111 0.61111 0.61111 0.38889 0.38889 0.38889 0.38889 0.16667 0.16667 0.16667 0.16667 1.00000 0.88889 0.77778 0.66667 0.77778 0.66667 0.55556 0.44444 0.55556 0.44444 0.33333 0.22222 0.33333 0.22222 0.11111 0.00000 110 The fixed doses and estimated ED50 when L=6 for RM6Cc (n=6, c=.001, 1) designs. .5, RM6C0 s xl ED50 O 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50050 0.50033 0.50017 0.50000 0.49983 0.49967 0.49950 1 2 3 4 5 6 RM6C5 O 1 2 3 4 5 6 xl ED50 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.75000 0.66667 0.58333 0.50000 0.41667 0.33333 0.25000 RM6C10 s xl ED50 O 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 0.50000 1.00000 0.83333 0.66667 0.50000 0.33333 0.16667 0.00000 1 2 3 4 5 6