Chapter 12: DNA- The Molecule of Heredity • DNA determines the structure of proteins –All living things contain proteins –Provide complete instructions for making proteins –Made up of nucleotides History of DNA Griffith (1928) • Tried to figure out how bacteria causes pneumonia • Experiment: – 1st: injected mice with disease-causing bacteria (all died) and again with harmless bacteria (no sickness) • He heated the disease-causing bacteria to kill them and injected it into mice (mice lived) – 2nd: mixed heat-killed bacteria with live, harmless bacteria and injected into mice (all died) • Conclusion: transformation 1 strain changed into another – Genes control changes to organisms History of DNA Avery (1944) • Repeated Griffith’s work – Experiment: Made an extract from heat-killed bacteria and treated it with enzymes (destroyed organic compounds) • Transformation still occurred • Repeated using enzymes to break down DNA – Transformation did not occur • Conclusion: DNA stores and transmits genetic info Hershey and Chase (1952) – Did experiments using radioactive viruses to infect bacteria (bacteriophages) • Used radioactive markers to determine what actually entered a bacterial cell – Conclusion: Discovered DNA was the genetic material of all living things Franklin and Wilkins (1950’s) – Experiment: Used X-ray diffraction on DNA – Conclusion: strands in DNA are twisted around each other (helix) Watson and Crick (1953) – No experiment – Conclusion: Discovered the structure of DNA • Made up of 2 chains of nucleotides held together by nitrogen bases • Double helix (twisted ladder) Chapter 12 Scientist Review: Match the scientist with the description of his or their conclusions: Griffith Avery Hershey &Chase _____ concluded that the genetic material of a bacteriophage is DNA _____ concluded that DNA was the factor that caused one bacterium to transform into another _____ concluded that bacteria could be transformed from harmless to disease-causing by an unknown factor DNA in Cells • Located in the nucleus of cells as chromosomes • Packed tightly • Consists of more than 30 million base pairs • Complimentary DNA strands – Can use 1 strand to make a copy of the other strand using base pairing Nucleotides • Make up DNA • 3 parts to a nucleotide: – A simple sugar called Deoxyribose – A phosphate group – A nitrogen base Nitrogen Bases • 4 possible nitrogen bases: –Adenine (A) –Guanine (G) –Cytosine (C) –Thymine (T) Adenine (A) and Guanine (G) • Double-ringed nitrogen bases • Called purines Thymine (T) and Cytosine (C) • Single-ringed nitrogen bases • Called pyrimidines Chargaff • % of Guanine and Cytosine are equal • % of Adenine and Thymine are equal • Nucleotides join together to form long chains of complimentary base pairs – Adenine always pairs with Thymine (A-T or T-A) – Guanine always pairs with Cytosine (G-C or C-G) Structure of DNA • Nitrogen bases of the nucleotides hold 2 strands of DNA together with weak hydrogen bonds • Twisted DNA double helix Sides of the ladder: • alternating phosphate groups and sugar molecules Rungs of the ladder: • pairs of nitrogen bases • joined by weak hydrogen bonds DNA Replication • Making a copy of DNA • DNA is copied before cell division – Takes 6 hours in humans – During the S phase of interphase • DNA will separate into 2 strands – Carried out by the enzyme DNA polymerase • Unzips DNA by breaking hydrogen bonds to unwind the double helix – Each strand acts as a template or model to make new DNA strands • Makes new complimentary strands through base-pairing • Example: – TACGTT – Old DNA strand ATGCAA – New DNA strand • After DNA is replicated, DNA will have 1 old strand and 1 new strand Chapter 12 Bell Ringer #1: 1. The structure of a DNA molecule can be described as a _____. 2. During DNA replication, the DNA molecule ______ into two strands. 3. DNA looks like a twisted ladder. Which parts of a twisted ladder represent the hydrogen bonds and the sugar-phosphate backbones? The Genetic Code • DNA controls protein synthesis • Proteins have chains of amino acids • A code is needed to convert messenger RNA (mRNA) into a protein • 20 amino acids – Codon: a group of 3 Nitrogen bases that code for a specific amino acid • 64 possible combinations of codons • Some code for amino acids • Some code for making proteins • More than 1 codon can code for the same amino acid • There is 1 start codon (amino acid methionine) – DNA TAC – RNA AUG • There are 3 stop codons – Code for no amino acids • The sequence of nucleotides (N-bases) is the code for what controls the production of all proteins Transcription • • • • Occurs in the nucleus Making an RNA copy of a part of DNA Makes messenger RNA (mRNA) Requires RNA polymerase – Binds to and separates DNA – Strands of DNA used as a template – Binds to DNA regions called promoters • 4 Steps: – RNA polymerase unzips the DNA – Free RNA nucleotides floating in the cytoplasm base pair with nucleotides on DNA strand (makes mRNA) – mRNA strand breaks away and DNA strands go back together – mRNA leaves nucleus and goes out to the cytoplasm • Result of transcription: formation of 1 singlestranded RNA molecule Example: DNA A G C T G A C T G mRNA Example: DNA mRNA A U G C C G T A G C A U C G T A G C Name of amino acid: Two Types of Nucleic Acids: RNA and DNA DNA RNA (3 types) Sugar Deoxyribose Ribose Bases G, C, A, T G, C, A, U (uracil) Structure Doublestranded Single-stranded Location in a Cell Base Pairing Only in the nucleus C-G and A-T In nucleus and cytoplasm C-G and A-U Messenger RNA (mRNA) • Brings instructions from DNA out of the nucleus and into the cytoplasm • Moves toward the ribosomes Ribosomal RNA (rRNA) • Makes up ribosomes • Binds to messenger RNA • Uses the instructions from DNA to put amino acids in the correct order Transfer RNA (tRNA) • Delivers the amino acids to the ribosomes to be made into a protein RNA Editing • DNA has introns (sequences of nucleotides) – Edited out before they become functional – Not involved in coding for proteins • Exons: code for proteins – Remaining pieces of DNA put together with cap and tail = final RNA molecule DNA Controls Protein Synthesis • What are proteins? – Long chains of amino acids (polypeptides) – Key structures and regulators of cell functions • Help with structural parts • Enzymes chemical reactions • Help in transport through cell membrane Making Proteins • Protein production is similar to building car –DNA provides workers with instructions for making proteins –Workers build proteins (RNA) –Other workers bring parts (amino acids) to the assembly line Translation • Process of building proteins from mRNA • Takes place in the ribosomes • Transfer RNA (tRNA) brings amino acids to the ribosomes – Attaches to only 1 type of amino acid – Amino acid will become bonded to 1 side of the tRNA – The other side of the tRNA has 3 nitrogen bases called an anticodon • Pairs up with mRNA codon • Amino acids are joined by peptide bonds • Anticodon bind to the codon of mRNA through base pairing – Example: Codon: CGA Anticodon: GCU • A chain of amino acids form until a stop codon is reached – Translation will end – Amino acid strand is released from the ribosome to become proteins Chapter 12 Bell Ringer #2: 1. The 3 main types of RNA are ___, ___, & ___. 2. Copying part of a nucleotide sequence of DNA into a complementary sequence in RNA is called ____. 3. During the process of _____, the information carried by mRNA is used to produce proteins. 4. Each tRNA molecule contains 3 unpaired bases, called the _____, which ensure that amino acids are added in the correct sequence. Mutations • Any change in the sequence of DNA • Can be caused by errors in: –DNA replication –Transcription –Cell division –External agents Mutations in Reproductive Cells: Birth Defects • Within the egg or sperm cells • Can produce new traits • Can result in proteins that do not work (can kill organism) • Could have positive effects – Faster – Stronger – Important in the evolution of a species Mutations in Body Cells • Not passed on to offspring • May impair cell function • Can affect genes that control cell division (cancer) Point Mutation (substitution) • Change in 1 N-base in DNA • Example: CGATTACGC (normal DNA) CGATTTCGC (mutated DNA) • Albinism – Inability to produce pigments – Lethal to plants Frameshift Mutation • 1 N-base is added or deleted • Changes all codons from that point on • Example: CGATTACGC CGAATTACGC (N-base added) • Example: CGATTACGC CGTTACGC (N-base deleted) • May cause no problems or can be severe • More dangerous than point mutations Chromosomal Mutations • Involve many genes • Usually very bad – Can change location of genes or number of copies • Involve changes in number or structure of chromosomes • 4 types: – Deletions taking away – Insertions adding – Inversions switching parts (ex: ab ba) – Translocations breaking off • Many occur from improper separation during meiosis Causes of Mutations • Spontaneous or random mutations • Mutagens (things that cause mutations) – Radiation, X-Rays, UV light, chemicals – Carcinogens • Source of genetic variation Gene Regulation • Certain DNA sequences serve as promoters (binding sites for RNA polymerase) • Ex: E. coli – Group of 3 genes that are turned on and off together (called an operon) – E. coli uses lactose as food • Genes must be expressed called lac operon • Lac genes turned off by repressors (binds to operator) – Prevents transcription of its genes • Lac genes turned on by presence of lactose – Binds to repressor, allowing RNA polymerase to transcribe genes • Operons generally not found in eukaryotic cells • Eukaryotic cells (more complex) – Has short region of DNA (TATA box) • 30 base pairs long • Helps RNA polymerase position itself – Hox genes • Series of genes that controls organs and tissues that develop in embryos • Determine basic body plan • Mutations can change organs – Ex: fruit fly • Expressed genes are transcribed into RNA – Genes are expressed with help from DNAbinding proteins Chapter 12 Bell Ringer #3: 1. Genetic information is altered when changes in the DNA sequence, called ____ occur. 2. Changes in the DNA sequence of a single gene are called _____. 3. What causes the lac genes in E. Coli to turn off? 4. What causes the Lac genes in E. Coli to turn on?