Patterns of Inheritance Chapters 14 and 15 A. P. Biology Liberty Senior High School Mr. Knowles How do you make a giraffe? X G. camelopardalis Early Ideas of Genetics • Saw patterns of inheritance in people and domesticated plants and animals. • Bizarre chimeras explained variation- not true – heredity occurs within species. • Thought traits were “blended” from parents. • Traits are transmitted directlyexplained by a seed “gonons” (Hippocrates) or “humuculus” (Leewenhoek) Gregor Mendel (1866) Wrinkled Smooth Pea Color Why Peas (Pisum sativum)? • Many varieties or strains of plant. • These strains are true-breeding or pure – produce the same trait generation after generation. • The strains can be hybridized or strains crossed (T. A. Knight, 1790s). • Can be self-fertilized or crossfertilized. Table 14.1 • First, alternative versions of genes – Account for variations in inherited characters, which Allele for purple flowers are now called alleles Locus for flower-color gene Figure 14.4 Allele for white flowers Homologous pair of chromosome s Homologous Chromosomes A C G Brown T A Allele C Locus Gene A C G Blue G Allele C T Some Terms • Locus (i)- position on a chromosome where a gene is located. • Alleles- alternative forms of a gene. Different genetic information for a protein. • Phenotype- “form that is shown”physical appearance of a trait. • Genotype- the sum of an organism’s alleles. Phenotype versus Genotype Phenotype Purple 3 Purple Genotype PP (homozygous) 1 Pp (heterozygous) 2 Pp (heterozygous) Purple 1 Figure 14.6 White pp (homozygous) Ratio 3:1 Ratio 1:2:1 1 Some Terms • Dominant Allele- an allele whose expression is readily seen; affects the phenotype more. • Recessive Allele-an allele whose expression is less seen; affects the phenotype less. • Homozygous- organism with two identical alleles at the same locus. • Heterozygous- organism with two different alleles at one locus. Summary of Mendel’s Crosses • A cross between homozygous dominant X homozygous recessive, F1 progeny are all heterozygous, and resemble the homozygous dominant parent in phenotype. • Two alternative alleles of a gene segregate randomly. A Testcross APPLICATION An organism that exhibits a dominant trait, such as purple flowers in pea plants, can be either homozygous for the dominant allele or heterozygous. To determine the organism’s genotype, geneticists can perform a testcross. Dominant phenotype, unknown genotype: PP or Pp? Recessive phenotype, known genotype: pp If PP, then all offspring purple: If Pp, then 2 offspring purple and 1⁄2 offspring white: TECHNIQUE In a testcross, the individual with the unknown genotype is crossed with a homozygous individual expressing the recessive trait (white flowers in this example). By observing the phenotypes of the offspring resulting from this cross, we can deduce the genotype of the purple-flowered parent. p 1⁄ p p p RESULTS P P Pp Figure 14.7 Pp P Pp Pp pp pp p Pp Pp Testcross (Backcross) • How can you tell if an organism with a dominant phenotype is a Het. or Homo.? • To determine whether an individual is a Het or Homo., cross the individual with a known homozygous recessive- Testcross. Summary of Mendel’s Crosses • If cross or self-fertilize the F2 generation, the result is a 3:1 ratio. • Crosses with individuals that are heterozygous at one locus-Monohybrid Cross. • The two alternative alleles segregate independently from one another and are distinct- Law of Segregation. Law of Segregation • Alternative forms of a gene (alleles) are discrete and do not blend in Hets. • Alleles independently assort from each other into gametes. • Each gamete has an equal probability of receiving either allele. Do different genes also segregate independently? • Examine crosses which involve two genes. (Ex. seed shape and seed color). Fig. 13.16, p. 282.) • Crosses with individuals heterozygous at two different loci- Dihybrid Crosses. • Genes assort independently in the F2 with a 9:3:3:1 ratio. A dihybrid cross: – Illustrates the inheritance of two characters • Produces four phenotypes in the F2 generation P Generation EXPERIMENT Two true-breeding pea plants— one with yellow-round seeds and the other with greenwrinkled seeds—were crossed, producing dihybrid F1 plants. Self-pollination of the F1 dihybrids, which are heterozygous for both characters, produced the F2 generation. The two hypotheses predict different phenotypic ratios. Note that yellow color (Y) and round shape (R) are dominant. YYRR yyrr Gametes YR F1 Generation yr YyRr Hypothesis of independent assortment Hypothesis of dependent assortment Sperm Sperm 1⁄ 2 RESULTS F2 Generation (predicted offspring) YR 1⁄ 2 yr Eggs 1⁄ 2 YR CONCLUSION The results support the hypothesis of independent assortment. The alleles for seed color and seed shape sort into gametes independently of each other. YYRR YyRr 1⁄ 2 1⁄ 4 YR 1⁄ 4 1⁄ 4 Yr yR 1⁄ 4 yr Eggs 1⁄ 4 YR 1⁄ 4 Yr 1⁄ 4 yR YYRR YYRr YyRR YyRr YYrr YYrr YyRr Yyrr YyRR YyRr yyRR yyRr YyRr Yyrr yyRr yyrr yr YyRr 3⁄ 4 yyrr 1⁄ 4 Phenotypic ratio 3:1 1⁄ 4 yr 9⁄ 16 3⁄ 16 3⁄ 16 1⁄ 16 Phenotypic ratio 9:3:3:1 Figure 14.8 315 108 101 32 Phenotypic ratio approximately 9:3:3:1 Law of Independent Assortment • Genes located on different chromosomes assort independently of one another- Independent Assortment. How would separate genes located close to one another on a chromosome be inherited? Linked Genes-do not assort independently. Was Mendel lucky? Non-Mendelian Inheritance Complex Patterns of Inheritance: How Genes Interact Incomplete Dominance • Red (CRCR) X White (CWCW) Snapdragons • F1 generation are all pink (CRCW) • F2 generation is 1 red:2 pink:1 white • Not blending, parental phenotype is recovered in the F2. Incomplete Dominance Red (CRCR) Roan (CRCW) X White (CWCW) Codominance • MN Blood Type: a single gene locus (B) at which two alleles (M and N) are possible. Genotype Phenotype B M BM M blood group B N BN N blood group B M BN MN blood group Codominance • The MN phenotype is not intermediate between M and the N phenotypes. Codominance • A,B,O Blood Type: a specific locus (I) at which there are three common alleles (A, B, and O). They are modifying enzymes. They modify cell surface glycolipids. Codominance in Blood Types Enzyme A B O Function adds a galactosamine adds a galactose does not add anything A, B, O, AB Blood Types Genotype IAIA or IAIO IBIB or IBIO IAIB I OI O Phenotype + galactosamine, Blood Type A + galactose Blood Type B + both Blood Type AB neither added, Type O Distribution of O Allele Distribution of A allele Distribution of B allele A “Typical” Antibody Compatible Blood Groups • Donors and recipients must have matching cell surface molecules. • If not “self,” the recipient will produce proteins called antibodies to agglutinate (clump together) the donated blood cells. • The foreign cell surface molecule is an antigen. Agglutination Reactions A Blood B Blood Agglutination Reactions AB Blood O Blood Agglutination for the Rh or D Antigen Rh Positive Blood Rh Negative Blood Blood Group Compatibility Blood Type A B AB O Antibodies Produced anti-B anti-A neither antibody (universal recipient) anti-A and anti-B (universal donor) Rh Factor in Humans • Rh Blood Group: another cell surface marker on RBC’s controlled by > 7 closely linked genes. Genotype Phenotype R R or R r cell surface marker (about are Rh+ 85%) rr lack molecule, Rh- Rh Factor in Humans - • What happens when an Rh female X Rh+ male? • Offspring is possibly Rh+. • If fetal Rh+ RBCs cross the placenta and treated as a foreign antigen. • Anitbodies (IgG) cross the placenta and agglutinate fetal RBC’s- erythroblastosis fetalis • Treat with Rhogam: anit-Rh antibodies and prevent maternal immune response. Erythroblastosis fetalis Genetic Diseases can be Mendelian Dominant or Recessive Autosomal Dominant Diseases • Homozygotes and Heterozygotes can be phenotypically the same- both show disease phenotype. • Lethal dominant diseases are less common. Why? Autosomal Dominant Diseases • Familial Hypercholesterolemiamost common; 1:500; 19p13.2-p13.1 • Huntington’s Disease- production of an inhibitor of brain cell metabolism; degeneration of nervous system at middle age; lethal dominant; 1:10,000; 4p16.3 Familial Hypercholesterolemia QuickTime™ and a GIF decompressor are needed to see this picture. The Solution-Balloon Angioplasty A Stent Marfan Syndrome- Dominant Mutation • Marfan’s Syndromemutation in the fibrillin gene (glycoprotein in connective tissue). Marfan’s Sufferer? Mitral Valve Prolapse Baby with Osteogenesis Imperfecta Osteogenesis Imperfectaautosomal dominant Gene for Neurofibromatosis Type 2 NeurofibromatosisAutosomal Dominant Joseph Merrick-N. F. or Proteus Syndrome? Baby with Achondroplasia Achondroplasia- autosomal dominant • Affects in 1:10,000. • Heterozygotes have dwarf phenotype. • Homozygosity is lethal. Polydachtyly -dominant mutation at 13q21-q32, occurs only 1/400) Autosomal Recessive Diseases • Heterozygotes are phenotypically normal, called carriers. • Only the homozygous recessive alleles are diseased. • Lethal Recessive Diseases are more common. Why? Cystic fibrosis-Autosomal Recessive • Most common Caucasian genetic disease1: 2500 affected; 1:25 are carriers. • Mutation in a chloride channel protein (CFTR). • Leads to high [Cl-]in extracellular fluid. • Causes mucus to become thicker than normal-favors bacterial infections. • Untreated condition- death by fifth year. Molecular Mechanisms of CF C F Lung Tay-Sachs Disease • Recessive lethal allele-dysfunctional hexosaminidase A; unable to metabolize gangliosides (lipids of the CNS). • Lipids accumulate--> lead to neuron death and eventual death. • Affects 1: 3600 European Jews. • Only the homozygotes are affected and die. Tay-Sachs Diseased Tissue Tay-Sachs DiseaseAutosomal Recessive • Why are only the homozygous people affected? In other words, why is this disease recessive? • Answer: the Heterozygote produces about 1/2 the normal amount of enzyme--> they are phenotypically normal. Genetic Diseases are Codominant at the Molecular Level • Sickle-cell Disease: a single amino acid change at #6 (Glu-->Val) in the 146 a.a. chain of hemoglobin. • Mutant form of hemoglobin deforms the RBCs at low [O2]. • Multiple Symptoms: anemia, clumping and clogging of RBCs (heart failure and CV disease), spleen and kidney damage. Normal RBCs Sickle-Celled RBCs Sickle-Cell Clumping Removing Damaged RBC’s by Spleen Frontal Bossing-Replacing the RBCs The Genetics of Sickle-Cell Genotype Phenotype A+ A+ normal (9/10) A+ As Het. Carriers, usually normal, the two alleles are codominant; 1/10; resistance to malaria. As As severe disease 1/400 African-Americans Anopheles Mosquito Malaria in a RBC Dominance/Recessiveness • Range from Complete--->Incomplete------>Codominance. • Reflect the functions of the enzymes encoded by the alleles and not one allele subduing or overpowering another. • Dominance does not determine the relative frequency of alleles in a population. And That’s Dominance and Recessiveness! Other Patterns of Inheritance Complex Gene Interactions Multiple Alleles Possible for a Gene • Incomplete Dominance or Codominance• Ex. Coat color in cattle; Red X White ---> Roan A B • Ex. ABO blood type; the I and I are equally expressed--> AB blood type. Pleiotropy • When one gene or allele has multiple phenotypes (pleion= many). • Ex. Sickle-cell allele has many symptoms: Breakdown of RBCs--> Anemia, Heart Failure, Physical Weakness Clumping of RBCs--> Brain Damage, Kidney and Spleen Damage. Pleiotropy • Often a gene functions in some other unknown way. • Ex. Lucien Cuenot- tried to develop a true-breeding yellowfurred mouse. Y= dominant for yellow fur color. • Unable to get a YY strain. Why? Pleiotropic Effects of Y Yy (Yellow Fur Color, Dominant) Y allele YY (Lethal Development, Recessive) Epistasis • When a gene at one locus alters the phenotypic expression of another gene at a second locus. Epistasis • Ex. Coat Color in Mammals: One gene, the B locus: B = black or b = brown BB or Bb = both black, bb = brown Another gene, C, deposits pigment into hair CC or Cc = dominant for color cc = no pigment deposited, albino Genetics of Coat Color in Mammals • What do the offspring of a BbCc X BbCc (dihybrid) cross look like? • 9 Black : 3 Brown : 4 Albino • What would Mendel predict? • 9 : 3: 3 :1 Albinism in Humans Another Example of Epistasis • R. A. Emerson, 1918, Zea mays • Crossed two pure-breeding strains that never expressed purple pigment (anthocyanin) in seed coat. All of the F1 plants were purple! • Crossed these F1 plants--> 56% of F2 purple, 44% were not. How? Epistasis in Zea mays Starting Molecule (Colorless) Enzyme 1 Intermediate (Colorless) Enzyme 2 Anthocyanin (Purple) Epistasis in Zea mays • Dominant alleles encode functional enzymes and produce purple pigment. • Recessive alleles encode nonfunctional enzymes. • Requires BOTH dominant alleles for the purple phenotype. Another Example of EpistasisPTC Tasting • Can two non-tasters produce a taster child? • Answer: Yes! tt X tt --> Taster Offspring. • I lied! This trait isn’t a simple dominance/recessive trait. • Research suggests the phenotype is controlled by two genes. Polygenic Traits • These are not “either/or” characteristics, but a continuum or gradation. • Quantitative Characters-quantitative variation indicates polygenic inheritance- an additive effect of two or more genes on a single phenotypic character. • Converse of Pleiotropy. Polygenic Traits • Ex. Skin Color in Humans controlled by at least three separately inherited genes. Three Genes: A, B, C, dark-skin alleles, each contribute one “unit” of darkness and are incompletely dominant to the a, b, c alleles. AABBCC = very dark aabbcc = very light Human Skin Color AaBbCc = intermediate skin color Alleles have cumulative effect; AaBbCc and AABbcc both make same three unit contribution to darkness. Cross AaBbCc X AaBbCc AaBbCc X AaBbCc Skin Color aabbcc Aabbcc AaBbcc AaBbCc AABbCc AABBCc AABBCC 1/64 6/64 15/64 20/64 15/64 6/64 1/64 Very Light Intermediate Very Dark Polygenic Traits • Quantitative Characteristics- give a bell-shaped curve, a normal distribution. • Environmental Factors (sun exposure help smooth the curve also. • Ex. Height and Weight Multifactorial Inheritance • Environmental factors interact with genes. • Genotype may be a phenotypic range or possibilities- norm of reaction for the genotype. • The variation is due to environmental factors. Multifactorial Inheritance • The norm of reaction may be small- Example: ABO Blood type. • Or it may be very broad- Example: the Number of RBCs--> physical activity, altitude, health, the genes that control cell division. • Hydrangea Flowers - of the same genotype range in color from purple (alkaline soils) to pink (acidic soils) due to anthocyanin. • Cardiovascular Disease- ApoE gene (apolipoprotein E) and the angiotensin genes affect cholesterol levels and blood pressure levels--> genetic predisposition + lifestyle factors such as diet, smoking, physical activity. Some Defects are Multifactorial The End !