Litorina16 - Pop and Chrom Genetics

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The study uses amplified fragment analysis, finding evidence for parapatric speciation
occurring in populations of the intertidal snail Littorina saxatilis (rough periwinkle) living
on rocky shores. Non-allopatric speciation hypotheses often lead to debate and
controversy. Rice and Hostert (1993) demonstrated simple models where genetic
divergence can occur in circumstances of strong disruptive selection, without any period
of isolation between populations. In the study’s L. saxatilis example, populations are
distributed across a vertical gradient. Gene flow is limited between the populations
according to position along the cline. Strong selection and either pleiotropy or linkage is
necessary between genes responsible for the adaptive polymorphism and genes
affecting probability of gene exchange between sympatrically diverging populations.
Initial differentiation can be amplified to increase isolation by the accumulation of
different alleles between diverging populations. Allopatric speciation shows uniform
divergence across the genome. A signature of non-allopatric speciation occurring can be
inferred when some loci show allele frequency differentiation and others not, suggesting
genetic exchange is variably restricted across the genome. The study compares FST
values of 306 AFLP loci with a FST predicted value distribution derived from a model
using mutation and migration data. 15 loci of the 306 loci (5%) showed greater
differentiation than expected from the model, compared to the majority remainder
where differentiation was weak. Inferred is that 95% of experimental loci are in an
equilibrium of mutation, drift and dispersal. At loci where differentiation exceeded
predictions of the model, selection on the loci (or closely linked loci) is suggested as
maintaining divergence.
An alternative hypothesis described in the paper explains the pattern of divergence as
differential introgression after an instance of secondary contact. Uniformly divergent
populations resulting from allopatric speciation mechanisms may later differentially
introgress, producing homogenisation of allele frequencies at all loci other than those
under selection or those linked to other loci under selection. The possibility of in situ
divergence is also discussed, where strong selection pressure can produce a similar
pattern of divergence despite gene flow.
The collected specimens were two morphs of Littorina saxatilis, a periwinkle, found in
five locations in Yorkshire. These two morphs were parapatric populations with an
observable cline. Using head-foot tissue samples, their DNA was isolated and amplified
fragment length polymorphism analysis (AFLP analysis) was conducted. Gels with the
primer-treated product were used to expose a film and the products were scored by
band presence. Analysis assumed banded individual dominance and Hardy-Weinberg
genotype frequencies. A simulation was run to compare its FST values to that of the real
population. Ten loci of the experiment population had higher values. These were
removed, and further comparisons of the morphs were run.
Fifteen loci were eventually identified that showed variation between the H and M
morph. These loci were theorised to be either under selection themselves or linked to
loci that were selected upon. This only occurred between morphs from different
locations. This variation did not occur within morphs. FST values, even with removal of
these loci, show that there is a small barrier between populations to prevent gene
exchange. There was also evidence of a distance barrier, but this was not entirely
responsible for mating prevention between morphs. This barrier grows larger when the
fifteen identified loci remain. Therefore they, or linked loci, are the reason for selection,
and are being maintained by it. It was not determined if this was due to primary or
secondary differentiation.
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