Lecture 4

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The packing animations below are due to John Winter, click here

Lecture 4

(Chapter 13 in Perkins)

Crystal Chemistry

Get polyhedral models from cabinet

Part 3:

Coordination of Ions

Pauling’s Rules

Crystal Structures

Coordination of Ions

 For ionic bonding, ion geometry ~ spherical

 Spherical ions will geometrically pack

( coordinate ) oppositely charged ions around them as tightly as possible while maintaining charge neutrality

 For a particular ion, the surrounding coordination ions define the apices (corners) of a polyhedron

 The number of surrounding ions is the

Coordination Number

Ionic Compound Formation

Anions

– negatively charged

– Larger than the un-ionized atom

Cations

– positively charged

• Smaller than the un-ionized atom

-

• Attraction

» Anion – Cation

+

• Repulsion

» Anion – Anion

» Cation – Cation

-

+ +

Coordination

Number and

Radius Ratio

Radius Ratio is

Rc (cation) / Ra (anion)

See Figure 13.3 of Perkins

See also the Ionic

Radii table of Perkins, following the inside front cover

Atomic and Ionic Radii

Can't absolutely determine: e cloud is nebulous & based on probability of encountering an e .

In crystalline solids the center-to-center distance = bond length & is accepted to = sum of ionic radii

How get ionic radius of X & Y in XY compound??

Atomic and Ionic Radii

Pure element first

Native Cu. Atomic radius = 1/2 bond length a a

X-ray d

100

 a

Ionic radius =

2 a

2

4

Atomic Radii

 Absolute radius of an atom based on location of the maximum density of outermost electron shell

 Effective radius dependent on the charge, type, size, and number of neighboring atoms/ions

- in bonds between identical atoms, this is half the interatomic distance

- in bonds between different ions, the distance between the ions is controlled by the attractive and repulsive force between the two ions and their charges

Charge and Attractive Force Control on Effective Ionic Radii

Approach until Repulsive and Attractive

Forces the same

Effect of Coordination Number and Valence on

Effective Ionic Radius

Higher coordination numbers have larger effective ionic radius

Extreme valence shells (1,6,7) have larger effective ionic radius

Decreasing

Ionic radii

Coordination

Number (CN)

(# of nearest neighbors) vs. ionic radius.

For cations of one element, higher coordination numbers have larger effective ionic radius

Coordination with O

-2

Anions

Note: Sulfur can have CN 6 at great depths

For example, in the inner core

When Rc / Ra approaches 1

a “c lose packed” array forms

Coordination Polyhedra

 We always consider coordination of anions about a central cation

Halite

Na

Cl

Cl Cl

Cl

Coordination Polyhedra

 Can predict the coordination by considering the radius ratio:

R

C

/R

A

Cations are generally smaller than anions so begin with maximum ratio = 1.0

Coordination Polyhedra

Radius Ratio: R

C

/R

A

= 1.0

(commonly native elements)

Equal sized spheres

“Closest Packed”

Notice:6 nearest neighbors in the plane arranged in a hexagon

Note dimples in which next layer atoms will settle

Two dimple types:

Type 1 upper point NE

Type 2 upper point NW

They are equivalent since you could rotate the whole structure 60 o and exchange them

2 1

Closest Packing

Add next layer

(red)

Once first red atom settles in, can only fill other dimples of that type

In this case covered all type 2 dimples, only 1’s are left

1

Closest Packing

Third layer ?

Third layer dimples again 2 types

Call layer 1 A sites

Layer 2 = B sites ( no matter which choice of dimples is occupied )

Layer 3 can now occupy A-type site (directly above yellow atoms) or C-type site (above voids in both A and B layers)

A C

Closest Packing

Third layer:

If occupy A-type site the layer ordering becomes A-B-A-B and creates a hexagonal closest packed structure

(HCP)

Coordination number (nearest or touching neighbors) = 12

6 coplanar

3 above the plane

3 below the plane

Closest Packing

Third layer:

If occupy A-type site the layer ordering becomes A-B-A-B and creates a hexagonal closest packed structure

(HCP)

Closest Packing

Third layer:

If occupy A-type site the layer ordering becomes A-B-A-B and creates a hexagonal closest packed structure

(HCP)

Closest Packing

Third layer:

If occupy A-type site the layer ordering becomes A-B-A-B and creates a hexagonal closest packed structure

(HCP)

Closest Packing

Third layer:

If occupy A-type site the layer ordering becomes A-B-A-B and creates a hexagonal closest packed structure

(HCP)

Note top layer atoms are directly above bottom layer atoms

Third layer:

Unit cell

Closest Packing

Third layer:

Unit cell

Closest Packing

Third layer:

Unit cell

Closest Packing

Closest Packing

Third layer:

View from top shows hexagonal unit cell

(HCP)

Closest Packing

Third layer:

View from top shows hexagonal unit cell

(HCP)

Closest Packing

Alternatively we could place the third layer in the C-type site (above voids in both A and B layers)

C

Closest Packing

Third layer:

If occupy C-type site the layer ordering is A-B-C-A-B-C and creates a cubic closest packed structure

(CCP)

Blue layer atoms are now in a unique position above voids between atoms in layers A and B

Closest Packing

Third layer:

If occupy C-type site the layer ordering is A-B-C-A-B-C and creates a cubic closest packed structure

(CCP)

Blue layer atoms are now in a unique position above voids between atoms in layers A and B

Closest Packing

Third layer:

If occupy C-type site the layer ordering is A-B-C-A-B-C and creates a cubic closest packed structure

(CCP)

Blue layer atoms are now in a unique position above voids between atoms in layers A and B

Closest Packing

Third layer:

If occupy C-type site the layer ordering is A-B-C-A-B-C and creates a cubic closest packed structure

(CCP)

Blue layer atoms are now in a unique position above voids between atoms in layers A and B

Closest Packing

Third layer:

If occupy C-type site the layer ordering is A-B-C-A-B-C and creates a cubic closest packed structure

(CCP)

Blue layer atoms are now in a unique position above voids between atoms in layers A and B

Cubic Closest Packing

View from the same side shows the cubic close packing

(CCP), also called face-centered cubic

(FCC) because of the unit cell that results. Notice that every face of the cube has an atom at every face center.

C-layer

A-layer

The atoms are slightly shrunken to aid in visualizing the structure

B-layer

A-layer

Closest Packing

Rotating toward a top view

Closest Packing

Rotating toward a top view

Closest Packing

You are looking at a top yellow layer A with a blue layer C below, then a red layer B and a yellow layer A again at the bottom

What happens when R

C

/R

A decreases?

The center cation becomes too small for the

C.N.=12 site (as if a hard-sphere atom model began to rattle in the 12 site) and it drops to the next lower coordination number (next smaller site).

It will do this even if it is slightly too large for the next lower site.

It is as though it is better to fit a slightly large cation into a smaller site than to have one rattle about in a site that is too large.

The next smaller crystal site is the CUBE:

Body-Centered Cubic

(BCC) with cation

(red) in the center of a cube

Coordination number is now 8 (corners of cube)

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

Set = 1

What is the R

C

/R

A that limiting condition??

of arbitrary since will deal with ratios

Diagonal length then = 2

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Then a hard-sphere cation would “rattle” in the position, and it would shift to the next lower coordination (next smaller site).

What is the R

C

/R

A that limiting of condition??

Rotate

A central cation will remain in 8 coordination with decreasing R

C

/R

A until it again reaches the limiting situation in which all atoms mutually touch.

Central Plane = 1 + 2 = 1.732

What is the R

C

/R

A that limiting of condition??

1.732 = d

C

+ d

A

If d

A

= 1 then d

C

= 0.732

d

C

/d

A

= R

C

/R

A

= 0.732/1 = 0.732

= 1

(arbitrary)

= 2

The limits for 8 coordination are thus between 1.0

(when it would be CCP or HCP) and 0.732

= 1 + 2 = 1.732

Note: Body Centered

Cubic is not a closest-packed oxygen arrangement.

= 1

(arbitrary)

= 2

As R

C

/R

A continues to decrease below the 0.732 the cation will move to the next lower coordination: 6, VI, or octahedral. The cation is in the center of an octahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.732 the cation will move to the next lower coordination: 6, VI, or octahedral. The cation is in the center of an octahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.732 the cation will move to the next lower coordination: 6, VI, or octahedral. The cation is in the center of an octahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.732 the cation will move to the next lower coordination: 6, VI, or octahedral. The cation is in the center of an octahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.732 the cation will move to the next lower coordination: 6, VI, or octahedral. The cation is in the center of an octahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.732 the cation will move to the next lower coordination: VI, or octahedral. The cation is in the center of an octahedron of closest-packed oxygen atoms

What is the R

C

/R

A that limiting condition??

of

= 2

= 1

1.414 = d

C

+ d

A

If d

A

= 1 then d

C

= 0.414

d

C

/d

A

= R

C

/R

A

= 0.414/1 = 0.414

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: 4, IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

As R

C

/R

A continues to decrease below the 0.414 the cation will move to the next lower coordination: IV, or tetrahedral. The cation is in the center of an tetrahedron of closest-packed oxygen atoms

What is the R

C

/R

A of the limiting condition??

Center-to-corner distance of a tetrahedron with edges of

1.0 = 0.6124

See derivation fig 4.3 c page 70

R

C

= 0.6124 - 0.5 = 0.1124

R

C

/R

A

= 0.1124/0.5 = 0.225

1

0.5

0.61

As R

C

/R

A continues to decrease below the 0.22 the cation will move to the next lower coordination:

III. The cation moves from the center of the tetrahedron to the center of an coplanar tetrahedral face of 3 oxygen atoms

What is the R

C

/R

A of the limiting condition??

cos 60 = 0.5/y y = 0.5774

1

0.5

y

R

C

= 0.5774 - 0.5 = 0.0774

R

C

/R

A

= 0.0774/0.5 = 0.155

If R

C

/R

A decreases below 0.15 the cation will move to the next lower coordination: 2 or II. The cation moves directly between 2 neighboring oxygen atoms

Pauling’s Rules

Rule 1: A coordination polyhedron of anions is formed around each cation, where:

- the cation-anion distance is determined by the sum of the ionic radii, and

- the coordination number of the polyhedron is determined by the cation/anion radius ratio (Rc:Ra)

Linus Pauling

Pauling’s Rules

Rule 2: The electrostatic valency principle

The strength of an ionic (electrostatic) bond (electrostatic valency e.v.) between a cation and an anion is equal to the charge of the ion (z) divided by its coordination number (n): e.v. = z/n

In a stable (neutral) structure, a charge balance results between the cation and its polyhedral anions with which it is bonded.

Charge Balance in Halite

In Halite, Na + has CN 6 and valence +1

Interpretation: Each Na

+ has 6 Cl neighbors, so each Clcontributes a charge of -1/6 to the Na +

6 x -1/6 = -1, so a charge balance results between the

Na+ cation and the six polyhedral Cl- anions with which it bonded. NEUTRALITY IS ACHIEVED

Charge

Balance In

Fluorite

In Fluorite , Ca ++ has CN 8 and valence +2, so the electrostatic valency is

¼ e.v.

Interpretation: Each Ca ++ has 8 F neighbors, so each Fcontributes a charge of -1/4 to the Ca ++

8 x -1/4 = -2, so a charge balance results between the

Ca ++ cation and the eight polyhedral F- anions with which it bonded. NEUTRALITY IS ACHIEVED

If electronegativity of anion and cation differs by 2.0 or more will be ionic

Formation of Anionic Groups

C has valence +4

C.N = 3 e.v. = 4/3 = 1 1/3

S has valence +6

CN = 4 electrostatic valency = 6/4 = 1 1/2 e- for Carbon 2.5, for O 3.5 covalent e- S 2.4 so also covalent

Carbonate

Sulfate

Remaining charge on Oxygens available for bonding

Pauling’s Rules

 Rule 3: Sharing of faces or edges is unstable.

 Rule 4: In structures with different types of cations, those cations with high valency and small CN tend not to share polyhedra with each other; when they do, polyhedra are deformed to accommodate cation repulsion

C.N. = “coordination number”

Pauling’s Rules -

principle of parsimony

 The number and types of different structural sites tends to be limited, even in complex minerals.

Comment: Different ionic elements are forced to occupy the same structural positions. This leads to solid solution.

Ionic Compound Formation

 Stable ionic crystals:

 maximize cation-anion contact

 minimize anion-anion & cation-cation contact

2-dimensional illustration of the concept of stability:

Visualizing Crystal Structure

Beryl - Be

3

Al

2

(Si

6

O

18

) Gold colored spheres cations

Ball and Stick Model

Show polyhedral models

Polyhedra Model

4-O Tetrahedral (T) and 6-O Octahedral (O)

Isostructural Types

 AX Compounds – Halite (NaCl) structure

Anions – in Cubic Close Packing

Cations – in octahedral sites

Rc/Ra =.73-.41 so CN = 6

Examples:

Halides: +1 cations (Li, Na, K, Rb) w/ anion charge -1: anions (F, Cl, Br, I)

Oxides: +2 cations (Mg, Ca, Sr, Ba, Ni) w/ O -2

Sulfides: +2 cations (Zn, Pb) w/ S -2

Isostructural Types

CCP= FCC close packing of the anions, small cations in octohedral “holes”

Isostructural Types

 AX Compounds – Sphalerite (ZnS) structure

R

Zn

/R

S

=0.60/1.84=0.32 (tetrahedral)

Isostructural Types

 AX

2

Compounds – Fluorite (CaF

2

) structure

Example CaF

2

:

R

Ca

/ R

F

= 1.12 / 1.31 = 0.75 (cubic CN = 8)

Examples: some Halides (CaF

2

, BaCl

2

...); Oxides (ZrO

2

...)

Isostructural Types – O and T sites

-

-

 ABO

4

Compounds – Spinel (MgAl

2

O

4

)structure

Oxygen anions in CCP array

Two different cations (may be same element w two different valences) in tetrahedral (T) sites (e.g. Mg 2+ , Fe 2+ , Mn 2+ , Zn 2+ ) or octahedral (O) sites (e.g. Al 3+ , Cr 3+ , Fe 3+ )

Nesosilicates

Olivine, Zircon

Staurolite

Sorosilicates

Epidote

Cyclosilicates

Beryl

Tourmaline

Inosilicates

(single chain)

Pyroxenes

Inosilicates

(double chain)

Amphiboles

Phyllosilicates

Micas, clays

Serpentine

Chlorite

Tectosilicates

Quartz group,

Feldspars

Feldspathoids

Zeolites

Next time

 Crystal Chemistry IV

Compositional Variation of Minerals

Solid Solution

Mineral Formula Calculations

Graphical Representation of Mineral

Compositions

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